BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00012957
         (1309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_194638.1| Ribonuclease H-like protein [Arabidopsis thalia...   162   2e-40
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   164   6e-40
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   152   1e-38
ref|XP_002444973.1| hypothetical protein SORBIDRAFT_07g002160 [S...   165   2e-38
gb|EAZ40370.1| hypothetical protein OsJ_24816 [Oryza sativa Japo...   161   4e-37

>ref|NP_194638.1| Ribonuclease H-like protein [Arabidopsis thaliana]
           gi|4972055|emb|CAB43923.1| putative protein [Arabidopsis
           thaliana] gi|7269807|emb|CAB79667.1| putative protein
           [Arabidopsis thaliana] gi|67633766|gb|AAY78807.1|
           putative reverse transcriptase/RNA-dependent DNA
           polymerase [Arabidopsis thaliana]
           gi|332660185|gb|AEE85585.1| Ribonuclease H-like protein
           [Arabidopsis thaliana]
          Length = 575

 Score =  162 bits (409), Expect(2) = 2e-40
 Identities = 92/290 (31%), Positives = 152/290 (52%), Gaps = 10/290 (3%)
 Frame = +1

Query: 1   PKEITKKMDTLNRALWWGEAKDKKRGWCPKAWISICKPQEDGGLGFKQFEEFNLAMITKT 180
           PK + K++ ++    WW   K + +G   KAW  +   + +GG+GFK  E FNLA++ K 
Sbjct: 14  PKTVCKQIISVLADFWWRN-KQEAKGMHWKAWDHLSCYKAEGGIGFKDIEAFNLALLGKQ 72

Query: 181 AWRMIKNPDSLTSRVLQTKYFKDSTPLNPTNLKQNSSWFWKGLWKGIQILQEVAIWKIGD 360
            WRM+  P+SL ++V +++YF  S PLN   L    S+ WK +    +IL++ A   +G+
Sbjct: 73  MWRMLSRPESLMAKVFKSRYFHKSDPLN-APLGSRPSFVWKSIHASQEILRQGARAVVGN 131

Query: 361 GKDIHLWNHNWIPLNTPNSIQRRDIKP----TIANTLSKVSEVLMDDSREWNVDFLQQVF 528
           G+DI +W H W+     ++  R    P       +++ KVS+++ +  REW  D ++ +F
Sbjct: 132 GEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGREWRKDVIEMLF 191

Query: 529 PANIVQNIIGIDLYQTTNTQDTLIWPLTRKGDLTVKFVYEFLIR------DPSEIGIIPR 690
           P  + + +IG          D+  W  T  GD TVK  Y  L +       P E+     
Sbjct: 192 P-EVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYWVLTQIINKRSSPQEVS--EP 248

Query: 691 PLNPIWRKIWSLKILPRMQVFVWKCYNGILPVSSKLGRWVTTIDTSCTMC 840
            LNPI++KIW  +  P++Q F+WKC +  LPV+  L     + +++C  C
Sbjct: 249 SLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRC 298



 Score = 31.6 bits (70), Expect(2) = 2e-40
 Identities = 36/160 (22%), Positives = 60/160 (37%), Gaps = 8/160 (5%)
 Frame = +3

Query: 852  ETDEHTLFHCPFSRAVWFGVNGRIPNHNTSVQLWIES------WISNRGISPIEGVRWNE 1013
            ET  H LF C F+R  W   +  IP        W +S      W+ N G    +  + ++
Sbjct: 303  ETVNHLLFKCTFARLTWAISSIPIPLGGE----WADSIYVNLYWVFNLGNGNPQWEKASQ 358

Query: 1014 LYATTSWFIWKARCLKCFQNIQQTQATTIGLIKGHLKHTNFNTKVMIPNRIPGPNQLANN 1193
            L     W +WK R    F+  +      +   +  L+     T+       P  N+ +  
Sbjct: 359  LVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGTKPQVNRSSCG 418

Query: 1194 QIMIPTPNQTMICY--SWWHTYLSIATVVIVLTYERGNNK 1307
            +   P P+Q + C   + W+       +  VL  E+G  K
Sbjct: 419  R-WRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVK 457


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score =  164 bits (414), Expect(2) = 6e-40
 Identities = 90/288 (31%), Positives = 156/288 (54%), Gaps = 8/288 (2%)
 Frame = +1

Query: 1    PKEITKKMDTLNRALWWGEAKDKKRGWCPKAWISICKPQEDGGLGFKQFEEFNLAMITKT 180
            PK I ++++++    WW   K+  RG   KAW  + +P+  GGLGFK+ E FN+A++ K 
Sbjct: 811  PKTICQQIESVMAEFWWKNKKEG-RGLHWKAWCHLSRPKAVGGLGFKEIEAFNIALLGKQ 869

Query: 181  AWRMIKNPDSLTSRVLQTKYFKDSTPLNPTNLKQNSSWFWKGLWKGIQILQEVAIWKIGD 360
             WRMI   DSL ++V +++YF  S PLN   L    S+ WK +++   ++++     IG+
Sbjct: 870  LWRMITEKDSLMAKVFKSRYFSKSDPLN-APLGSRPSFAWKSIYEAQVLIKQGIRAVIGN 928

Query: 361  GKDIHLWNHNWI---PLNTPNSIQRRD-IKPTIANTLSKVSEVLMDDSREWNVDFLQQVF 528
            G+ I++W   WI   P     +++R   +    AN++  V ++L+ D R+WN + +  +F
Sbjct: 929  GETINVWTDPWIGAKPAKAAQAVKRSHLVSQYAANSIHVVKDLLLPDGRDWNWNLVSLLF 988

Query: 529  PANIVQNIIGIDLYQTTNTQDTLIWPLTRKGDLTVKFVY----EFLIRDPSEIGIIPRPL 696
            P N  +NI+ +       T+D   W  +R G  +VK  Y    E + +  +   ++   L
Sbjct: 989  PDNTQENILAL-RPGGKETRDRFTWEYSRSGHYSVKSGYWVMTEIINQRNNPQEVLQPSL 1047

Query: 697  NPIWRKIWSLKILPRMQVFVWKCYNGILPVSSKLGRWVTTIDTSCTMC 840
            +PI+++IW L + P++  F+W+C N  L V+S L       + SC  C
Sbjct: 1048 DPIFQQIWKLDVPPKIHHFLWRCVNNCLSVASNLAYRHLAREKSCVRC 1095



 Score = 28.1 bits (61), Expect(2) = 6e-40
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 852  ETDEHTLFHCPFSRAVW 902
            ET  H LF CPF+R  W
Sbjct: 1100 ETVNHLLFKCPFARLTW 1116


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  152 bits (384), Expect(2) = 1e-38
 Identities = 87/281 (30%), Positives = 140/281 (49%), Gaps = 1/281 (0%)
 Frame = +1

Query: 1    PKEITKKMDTLNRALWWGEAKDKKRGWCPKAWISICKPQEDGGLGFKQFEEFNLAMITKT 180
            PK IT K+ +     WW    D  RG    AW  +C  + DGGLGF+  ++FN A++ K 
Sbjct: 595  PKAITSKLTSAVAKFWWSSNGDS-RGMHWMAWDKLCSSKSDGGLGFRNVDDFNSALLAKQ 653

Query: 181  AWRMIKNPDSLTSRVLQTKYFKDSTPLNPTNLKQNSSWFWKGLWKGIQILQEVAIWKIGD 360
             WR+I  PDSL ++V + +YF+ S PL+      + S+ W+ +     ++ +  I ++G 
Sbjct: 654  LWRLITAPDSLFAKVFKGRYFRKSNPLDSIK-SYSPSYGWRSMISARSLVYKGLIKRVGS 712

Query: 361  GKDIHLWNHNWIPLNTPNSIQRRDIKPTIANTLSKVSEVLMDDSREWNVDFLQQVFPANI 540
            G  I +WN  WIP   P   +      +I +   KV  ++   S  WN+D L+++F    
Sbjct: 713  GASISVWNDPWIPAQFPRPAK---YGGSIVDPSLKVKSLIDSRSNFWNIDLLKELFDPED 769

Query: 541  VQNIIGIDLYQTTNTQDTLIWPLTRKGDLTVKFVYEFLIRDPSE-IGIIPRPLNPIWRKI 717
            V  I  + +    N +DTL W  T+ G+ TVK  Y     D +E   +I   L  +   I
Sbjct: 770  VPLISALPI-GNPNMEDTLGWHFTKAGNYTVKSGYHTARLDLNEGTTLIGPDLTTLKAYI 828

Query: 718  WSLKILPRMQVFVWKCYNGILPVSSKLGRWVTTIDTSCTMC 840
            W ++  P+++ F+W+  +G +PVS  L +     D  C  C
Sbjct: 829  WKVQCPPKLRHFLWQILSGCVPVSENLRKRGILCDKGCVSC 869



 Score = 35.0 bits (79), Expect(2) = 1e-38
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
 Frame = +3

Query: 852  ETDEHTLFHCPFSRAVWF-----GVNGRIPNHNTSVQLWIESWISNRGISPIEGVRWNEL 1016
            E+  HTLF C  +R +W         G  P+++    L    W    G+           
Sbjct: 874  ESINHTLFQCHPARQIWALSQIPTAPGIFPSNSIFTNLDHLFWRIPSGVDSAP------- 926

Query: 1017 YATTSWFIWKARCLKCFQNIQQ 1082
            Y    W+IWKAR  K F+N+ +
Sbjct: 927  YPWIIWYIWKARNEKVFENVDK 948


>ref|XP_002444973.1| hypothetical protein SORBIDRAFT_07g002160 [Sorghum bicolor]
           gi|241941323|gb|EES14468.1| hypothetical protein
           SORBIDRAFT_07g002160 [Sorghum bicolor]
          Length = 469

 Score =  165 bits (418), Expect = 2e-38
 Identities = 91/259 (35%), Positives = 139/259 (53%), Gaps = 9/259 (3%)
 Frame = +1

Query: 91  AWISICKPQEDGGLGFKQFEEFNLAMITKTAWRMIKNPDSLTSRVLQTKYFKDSTPLNPT 270
           +W  +C  +E GGLG++    FNLAM+ +  WR++ NPDSL +RVL++KYF D   L+  
Sbjct: 5   SWELLCCRKEKGGLGYRDLHLFNLAMLARQGWRLLLNPDSLCARVLRSKYFSDGDLLSVV 64

Query: 271 NLKQNSSWFWKGLWKGIQILQEVAIWKIGDGKDIHLWNHNWIPLNTPNSIQRRDIKPTIA 450
             K   S+ W+ + +G+Q L++  IW++GDG  I++W   WI    P  + RR   P   
Sbjct: 65  E-KPGISYAWRSIVRGVQALKDGLIWRVGDGTQINIWTDPWI----PQGVTRRPCTPRGQ 119

Query: 451 NTLSKVSEVLMDDSREWNVDFLQQVFPANIVQNIIGIDLYQTTNTQDTLIWPLTRKGDLT 630
             L+KVSE++   S EW+ + +  +F    V+NI+ I L      +DTL W    KGD +
Sbjct: 120 TILNKVSELIDPISGEWDRNLVTDIFWEADVKNILSIPL--KNEMEDTLAWHYDPKGDFS 177

Query: 631 VKFVYEFL-----IRDPSEIG----IIPRPLNPIWRKIWSLKILPRMQVFVWKCYNGILP 783
           VK  Y  L     +    +IG     +  P N  W KIW L   P++++F W+  +  LP
Sbjct: 178 VKSAYHVLTDMKELSKRRQIGEASASLISPCNNNWHKIWKLHCPPKVKLFFWRFTHNSLP 237

Query: 784 VSSKLGRWVTTIDTSCTMC 840
           +   + R    IDT C +C
Sbjct: 238 LRMNILRRGMDIDTRCPVC 256


>gb|EAZ40370.1| hypothetical protein OsJ_24816 [Oryza sativa Japonica Group]
          Length = 613

 Score =  161 bits (407), Expect = 4e-37
 Identities = 90/279 (32%), Positives = 141/279 (50%), Gaps = 9/279 (3%)
 Frame = +1

Query: 31  LNRALWWGEAKDKKRGWCPKAWISICKPQEDGGLGFKQFEEFNLAMITKTAWRMIKNPDS 210
           ++R  W    ++ K  W   AW  +C   E GGLG++    FNLAM+   AWR++ N DS
Sbjct: 66  ISRFFWAQHDRENKMHWI--AWDKLCSRTEKGGLGYRDLHLFNLAMLAHQAWRLLSNLDS 123

Query: 211 LTSRVLQTKYFKDSTPLNPTNLKQNSSWFWKGLWKGIQILQEVAIWKIGDGKDIHLWNHN 390
           L +RVL+ KYF D   L         S+ W+ + +G+Q+L+   IW++GDG DI +WN  
Sbjct: 124 LCARVLKAKYFPDG-KLMEVRESPGISYSWRSIVRGVQVLKVGLIWRVGDGTDIDMWNDP 182

Query: 391 WIPLNTPNSIQRRDIKPTIANTLSKVSEVLMDDSREWNVDFLQQVFPANIVQNIIGIDLY 570
           WIPL T     +R I P     L+KV++++   + EW+ + +Q +F    V+NI+ I ++
Sbjct: 183 WIPLGT----TKRPITPRRGIVLNKVADLINPITGEWDRELIQDIFWEEDVKNILAIPVH 238

Query: 571 QTTNTQDTLIWPLTRKGDLTVKFVYEFL--------IRDPSEIGIIPRPLNPI-WRKIWS 723
                 D   W    +G  +VK  Y  L        IR   E          + W K+W 
Sbjct: 239 --NGYSDVAAWHFDPRGIFSVKSAYHTLEYQRDRQAIRQTGESSSGKTSSAALQWEKLWR 296

Query: 724 LKILPRMQVFVWKCYNGILPVSSKLGRWVTTIDTSCTMC 840
           L  LP+++ F+W+  +  LP+   + +    IDT C +C
Sbjct: 297 LNHLPKVKHFLWRLAHNSLPLRQNISKRGMEIDTRCPVC 335