BLASTX nr result

ID: Papaver23_contig00012947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00012947
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144376.1| PREDICTED: exosome complex component CSL4-li...   257   8e-67
ref|XP_002266663.1| PREDICTED: exosome complex component CSL4 [V...   256   1e-66
ref|XP_003590923.1| Ammonium transporter [Medicago truncatula] g...   256   2e-66
gb|ACU17429.1| unknown [Glycine max]                                  256   2e-66
ref|XP_002319669.1| predicted protein [Populus trichocarpa] gi|1...   253   1e-65

>ref|XP_004144376.1| PREDICTED: exosome complex component CSL4-like [Cucumis sativus]
           gi|449515303|ref|XP_004164689.1| PREDICTED: exosome
           complex component CSL4-like [Cucumis sativus]
          Length = 196

 Score =  257 bits (657), Expect = 8e-67
 Identities = 136/168 (80%), Positives = 146/168 (86%)
 Frame = +1

Query: 61  TPGEVLGYSSTLIPGKGAYLHNKTIYASLTGRRVIIPPSSDSPDQKRSIVEVTGHKAHGA 240
           TPGEVLG  S   PG+GAY+ + T+YASL+G R II P SDS D  RS VEVTGHKAHGA
Sbjct: 12  TPGEVLGNFSDFKPGRGAYVTDNTVYASLSGFRRIIHPPSDSSDL-RSTVEVTGHKAHGA 70

Query: 241 VPEPGSIVIARVTKVMAKMASADIMCVGTKSVKEKFSGVIRQQDVRATEIDKVDMHLSFR 420
           VP PGSIVI RVTKVM KMASADIMCVG KSVKEKF+G+IRQQDVRATEIDKVDMHLSFR
Sbjct: 71  VPAPGSIVIVRVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATEIDKVDMHLSFR 130

Query: 421 PGDIVKSLVLSLGDARAYYLSTAKNELGVVSAESIGGATMVPISYTEM 564
           PGDIVK+LVLSLGDARAY+LSTAKNELGVVSAES  GA MVPIS+TEM
Sbjct: 131 PGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAEMVPISWTEM 178


>ref|XP_002266663.1| PREDICTED: exosome complex component CSL4 [Vitis vinifera]
           gi|296085148|emb|CBI28643.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  256 bits (655), Expect = 1e-66
 Identities = 135/170 (79%), Positives = 148/170 (87%), Gaps = 2/170 (1%)
 Frame = +1

Query: 61  TPGEVLGYSSTLIPGKGAYL--HNKTIYASLTGRRVIIPPSSDSPDQKRSIVEVTGHKAH 234
           TPGEVLG  S L  G+GAY    N T+YASLTGRR +IPPS  S DQ R  VEVTGH AH
Sbjct: 12  TPGEVLGKGSQLKAGRGAYFLPQNGTVYASLTGRRSLIPPSPLSSDQ-RPTVEVTGHSAH 70

Query: 235 GAVPEPGSIVIARVTKVMAKMASADIMCVGTKSVKEKFSGVIRQQDVRATEIDKVDMHLS 414
           GA+PEPGSIVIARVTKVMA+MASADIMCVG KSV+EKF+G+IRQQDVRATEIDKVDMH S
Sbjct: 71  GAIPEPGSIVIARVTKVMARMASADIMCVGPKSVREKFTGIIRQQDVRATEIDKVDMHSS 130

Query: 415 FRPGDIVKSLVLSLGDARAYYLSTAKNELGVVSAESIGGATMVPISYTEM 564
           FRPGDIV++LVLSLGDARAY+LSTAKNELGVVSAES  GATMVP+S+TEM
Sbjct: 131 FRPGDIVRALVLSLGDARAYFLSTAKNELGVVSAESAAGATMVPMSWTEM 180


>ref|XP_003590923.1| Ammonium transporter [Medicago truncatula]
           gi|355479971|gb|AES61174.1| Ammonium transporter
           [Medicago truncatula]
          Length = 1109

 Score =  256 bits (653), Expect = 2e-66
 Identities = 132/170 (77%), Positives = 148/170 (87%), Gaps = 2/170 (1%)
 Frame = +1

Query: 61  TPGEVLGYSSTLIPGKGAYL--HNKTIYASLTGRRVIIPPSSDSPDQKRSIVEVTGHKAH 234
           TPGEV+G +  +  G+G Y   HN T+YASLTG R  IPP+SDSPDQ R IVEVTGHKAH
Sbjct: 9   TPGEVIGKTHDVKAGRGTYTSTHNNTVYASLTGFRHTIPPASDSPDQ-RPIVEVTGHKAH 67

Query: 235 GAVPEPGSIVIARVTKVMAKMASADIMCVGTKSVKEKFSGVIRQQDVRATEIDKVDMHLS 414
           G VPEPGS+VI RVTKVM K+A ADIMCVG KSV+EKF+GVIRQQDVRATEIDKVDMHLS
Sbjct: 68  GPVPEPGSVVIVRVTKVMTKIAEADIMCVGQKSVREKFTGVIRQQDVRATEIDKVDMHLS 127

Query: 415 FRPGDIVKSLVLSLGDARAYYLSTAKNELGVVSAESIGGATMVPISYTEM 564
           FRPGDIVK+LVLSLG+ARAY+L+TAKNELGVVSAES  GAT+VPIS+TEM
Sbjct: 128 FRPGDIVKALVLSLGNARAYFLTTAKNELGVVSAESTAGATLVPISWTEM 177


>gb|ACU17429.1| unknown [Glycine max]
          Length = 189

 Score =  256 bits (653), Expect = 2e-66
 Identities = 132/170 (77%), Positives = 149/170 (87%), Gaps = 2/170 (1%)
 Frame = +1

Query: 61  TPGEVLGYSSTLIPGKGAY--LHNKTIYASLTGRRVIIPPSSDSPDQKRSIVEVTGHKAH 234
           TPGEVLG +S +  G+GAY  LHN T+YASLTG R  +PP+ DS D  R  VEVTGHKAH
Sbjct: 11  TPGEVLGRTSDVKAGRGAYAALHNNTVYASLTGFRHTVPPAPDSSDL-RPTVEVTGHKAH 69

Query: 235 GAVPEPGSIVIARVTKVMAKMASADIMCVGTKSVKEKFSGVIRQQDVRATEIDKVDMHLS 414
           G VP+PGS+VIARVTKVMA+ ASADIMCVG KSV+EKF+G+IRQQDVRATEIDKVDMHLS
Sbjct: 70  GPVPQPGSVVIARVTKVMARSASADIMCVGPKSVREKFTGIIRQQDVRATEIDKVDMHLS 129

Query: 415 FRPGDIVKSLVLSLGDARAYYLSTAKNELGVVSAESIGGATMVPISYTEM 564
           F PGDIV++LVLSLGDARAY+LSTAKNELGVVSAESI GATMVP+S+TEM
Sbjct: 130 FHPGDIVRALVLSLGDARAYFLSTAKNELGVVSAESIAGATMVPVSWTEM 179


>ref|XP_002319669.1| predicted protein [Populus trichocarpa] gi|118483759|gb|ABK93772.1|
           unknown [Populus trichocarpa]
           gi|222858045|gb|EEE95592.1| predicted protein [Populus
           trichocarpa]
          Length = 199

 Score =  253 bits (647), Expect = 1e-65
 Identities = 134/174 (77%), Positives = 150/174 (86%), Gaps = 6/174 (3%)
 Frame = +1

Query: 61  TPGEVLGYSSTLIPGKGAYLHN------KTIYASLTGRRVIIPPSSDSPDQKRSIVEVTG 222
           TPGEVLG ++ L  GKGAY+ +      + +++SLTG R  + PS DSPDQ R  VEVTG
Sbjct: 9   TPGEVLGKATELKAGKGAYIGSYRDTDIQYVFSSLTGLRRTLSPSPDSPDQ-RPTVEVTG 67

Query: 223 HKAHGAVPEPGSIVIARVTKVMAKMASADIMCVGTKSVKEKFSGVIRQQDVRATEIDKVD 402
           HKAHGAVPEPGS+VIARVTKVMAK ASADIMCVG KSV+EKF+G+IRQQDVRATEIDKVD
Sbjct: 68  HKAHGAVPEPGSVVIARVTKVMAKTASADIMCVGPKSVQEKFTGIIRQQDVRATEIDKVD 127

Query: 403 MHLSFRPGDIVKSLVLSLGDARAYYLSTAKNELGVVSAESIGGATMVPISYTEM 564
           MHLSFRPGDIV++LVLSLGDARAYYLSTAKNELGVVSAES  GATMVPIS+TEM
Sbjct: 128 MHLSFRPGDIVRALVLSLGDARAYYLSTAKNELGVVSAESAAGATMVPISWTEM 181


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