BLASTX nr result

ID: Papaver23_contig00012802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00012802
         (1346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002872533.1| predicted protein [Arabidopsis lyrata subsp....   154   4e-35
ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinu...   154   7e-35
ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...   153   9e-35
ref|XP_002319467.1| global transcription factor group [Populus t...   153   9e-35
ref|NP_192809.1| FACT complex subunit SPT16 [Arabidopsis thalian...   153   1e-34

>ref|XP_002872533.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297318370|gb|EFH48792.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 532

 Score =  154 bits (390), Expect = 4e-35
 Identities = 110/318 (34%), Positives = 167/318 (52%), Gaps = 17/318 (5%)
 Frame = +2

Query: 431  KNKMKRLRMGEKHRLKKLTDGKGQLLWMEKKDRVISLLDVTI---LQGKETIVGTLEAHG 601
            K K+  L      R   +T  K ++     K + + LL++ I     G++ I GTLEAH 
Sbjct: 104  KRKVMSLESERAERTSLVTQEKLKIA--SNKSKPLRLLNLWIRPPFSGRKKIRGTLEAHA 161

Query: 602  NAFIYTASSFRQHFYFNNITASFFRLGDERMPPLLHFQLHHPIMMGTEVTKVIEF----R 769
            N F Y+ ++ R    F NI  +F +  ++ M  LLHF LH+ IM+GT+ TK ++F    R
Sbjct: 162  NGFRYSTANDRVDVLFANIKHAFVQPAEKEMTTLLHFHLHNHIMVGTKKTKDVQFYVEVR 221

Query: 770  LVQSPLGEKRS----DHDSVKIEKVKQIRDECCNNQLMKFVDKVDARWNF----QCKEPF 925
             V   LG  R     D D +  E+ ++ R    N +   F ++V+  W           F
Sbjct: 222  DVVQSLGSGRRSSAYDLDEIDEEQRERDRKNKINMEFNHFANRVNDIWKLPQFASLDLEF 281

Query: 926  DELEKKYEFYGVLPLKASSAAFALTLDHLIVLVGRPVSVFLLSDIEFVNLAQLRPGE--I 1099
            D+  ++  F+GV P K +SA    T   L+ L+  P  V  LS+IE VNL ++  G+   
Sbjct: 282  DQPLRELGFHGV-PHK-TSAFIIPTSSCLVELIEHPFLVVSLSEIEIVNLERVGFGQRSF 339

Query: 1100 DMTVIFQDFKEDKVLEINSIPLESLVGIKDRLNYLDVKYYVNSKKPEWKDILKNIAASPE 1279
            DM +IF+DFK+D V  I+S+P  SL GIK+ L+ +D+KYY +     W+ ILK I   P+
Sbjct: 340  DMVIIFKDFKKD-VYRIDSVPTSSLEGIKEWLDTIDIKYYESKLNLNWRQILKTITDDPQ 398

Query: 1280 EFIKNGGWDQYDLEDDDT 1333
             FI +GGW+  +L   D+
Sbjct: 399  SFIDDGGWEFLNLNGSDS 416


>ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinus communis]
            gi|223548526|gb|EEF50017.1| FACT complex subunit SPT16,
            putative [Ricinus communis]
          Length = 1098

 Score =  154 bits (388), Expect = 7e-35
 Identities = 106/268 (39%), Positives = 156/268 (58%), Gaps = 15/268 (5%)
 Frame = +2

Query: 575  IVGTLEAHGNAFIYTAS--SFRQHFYFNNITASFFRLGDERMPPLLHFQLHHPIMMGTEV 748
            + G+LEAH N   Y+ S    R    ++NI  +FF+  D+ M  LLHF LH+ IM+G + 
Sbjct: 694  LTGSLEAHVNGLRYSTSRPDERIDVMYSNIKHAFFQPADKEMITLLHFHLHNHIMVGNKK 753

Query: 749  TKVIEF-----RLVQSPLGEKRSDHDSVKIEKVKQIRDEC--CNNQLMKFVDKVDARWN- 904
            TK ++F      +VQ+  G KRS +D  +IE+ ++ RD     N     FV++V+  W  
Sbjct: 754  TKDVQFFIEVMDIVQTLGGGKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNRVNDVWGQ 813

Query: 905  --FQCKE-PFDELEKKYEFYGVLPLKASSAAFALTLDHLIVLVGRPVSVFLLSDIEFVNL 1075
              F+  +  FD+  ++  F+GV P KAS A    T   L+ L+  PV V  LS+IE VNL
Sbjct: 814  PQFRGLDLEFDQPLRELGFHGV-PHKAS-AFIVPTSSCLVELIETPVVVITLSEIEIVNL 871

Query: 1076 AQLRPGE--IDMTVIFQDFKEDKVLEINSIPLESLVGIKDRLNYLDVKYYVNSKKPEWKD 1249
             ++  G+   DMT++F+DFK D VL I+SIP  SL  IK+ LN  D+KYY +     W+ 
Sbjct: 872  ERIGLGQKNFDMTIVFKDFKRD-VLRIDSIPSTSLDSIKEWLNTTDLKYYESRLNLNWRP 930

Query: 1250 ILKNIAASPEEFIKNGGWDQYDLEDDDT 1333
            ILK I   PE+FI++GGW+  ++E  D+
Sbjct: 931  ILKTITDDPEKFIEDGGWEFLNMEVSDS 958


>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score =  153 bits (387), Expect = 9e-35
 Identities = 105/268 (39%), Positives = 156/268 (58%), Gaps = 15/268 (5%)
 Frame = +2

Query: 575  IVGTLEAHGNAFIYTAS--SFRQHFYFNNITASFFRLGDERMPPLLHFQLHHPIMMGTEV 748
            + G+LE+H N F Y+ S    R    + NI  +FF+  ++ M  LLHF LH+ IM+G + 
Sbjct: 697  LTGSLESHTNGFRYSTSRPDERVDIMYGNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKK 756

Query: 749  TKVIEF-----RLVQSPLGEKRSDHDSVKIEKVKQIRDEC--CNNQLMKFVDKVDARWN- 904
            TK ++F      +VQ+  G KRS +D  +IE+ ++ RD     N     FV++V+  W  
Sbjct: 757  TKDVQFFVEVMDVVQTLGGGKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNRVNDLWGQ 816

Query: 905  --FQCKE-PFDELEKKYEFYGVLPLKASSAAFALTLDHLIVLVGRPVSVFLLSDIEFVNL 1075
              F+  +  FD+  ++  F+GV P KAS A    T   L+ L+  P  V  LS+IE VNL
Sbjct: 817  PQFKGLDLEFDQPLRELGFHGV-PHKAS-AFIVPTSSCLVELIETPFLVITLSEIEIVNL 874

Query: 1076 AQLRPGE--IDMTVIFQDFKEDKVLEINSIPLESLVGIKDRLNYLDVKYYVNSKKPEWKD 1249
             ++  G+   DMT++F+DFK D VL I+SIP  SL GIK+ L+  D+KYY +     W+ 
Sbjct: 875  ERVGLGQKNFDMTIVFKDFKRD-VLRIDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRP 933

Query: 1250 ILKNIAASPEEFIKNGGWDQYDLEDDDT 1333
            ILK I   PE+FI++GGW+  +LE  D+
Sbjct: 934  ILKTITEDPEKFIEDGGWEFLNLEVSDS 961


>ref|XP_002319467.1| global transcription factor group [Populus trichocarpa]
            gi|222857843|gb|EEE95390.1| global transcription factor
            group [Populus trichocarpa]
          Length = 1053

 Score =  153 bits (387), Expect = 9e-35
 Identities = 115/322 (35%), Positives = 179/322 (55%), Gaps = 21/322 (6%)
 Frame = +2

Query: 431  KNKMKRLRMGEKHRLKKLT-DGKGQLLWMEKKDRVISLLDVTIL-----QGKETIVGTLE 592
            K   +++   E  R ++ T   + +L     K + + LLD+ +      +G++ + G+LE
Sbjct: 644  KTLRRQVTSRESERAERATLVSQEKLQLSSSKFKPMKLLDLWVRPPFGGRGRK-LTGSLE 702

Query: 593  AHGNAFIYTAS--SFRQHFYFNNITASFFRLGDERMPPLLHFQLHHPIMMGTEVTKVIEF 766
            +H N   Y+ S    R    F NI  +FF+  ++ M  LLHF LH+ IM+G + TK ++F
Sbjct: 703  SHTNGLRYSTSRPDERVDVMFGNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQF 762

Query: 767  RL-----VQSPLGEKRSDHDSVKIEKVKQIRDEC--CNNQLMKFVDKVDARWN---FQCK 916
             +     VQ+  G KRS +D  +IE+ ++ RD     N     FV++V+  W+   F+  
Sbjct: 763  YIEVIDVVQTIGGGKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNRVNDVWSQPQFKAL 822

Query: 917  E-PFDELEKKYEFYGVLPLKASSAAFALTLDHLIVLVGRPVSVFLLSDIEFVNLAQLRPG 1093
            +  FD+  ++  F+GV P K S A    T   L+ L+  P  V  LS+IE VNL ++  G
Sbjct: 823  DLEFDQPLRELGFHGV-PHKVS-AFIVPTSSCLVELIETPCVVITLSEIEIVNLERVGLG 880

Query: 1094 E--IDMTVIFQDFKEDKVLEINSIPLESLVGIKDRLNYLDVKYYVNSKKPEWKDILKNIA 1267
            +   DMTV+F+DFK D VL I+SIP  SL GIK+ LN  D+KYY +     W+ ILK I 
Sbjct: 881  QKNFDMTVVFKDFKRD-VLRIDSIPSTSLDGIKEWLNTTDLKYYESRLNLNWRPILKTIT 939

Query: 1268 ASPEEFIKNGGWDQYDLEDDDT 1333
              PE+FI++GGW+  ++E  D+
Sbjct: 940  DDPEKFIEDGGWEFLNMEVSDS 961


>ref|NP_192809.1| FACT complex subunit SPT16 [Arabidopsis thaliana]
            gi|75220257|sp|O82491.1|SPT16_ARATH RecName: Full=FACT
            complex subunit SPT16; AltName: Full=Facilitates
            chromatin transcription complex subunit SPT16
            gi|3600033|gb|AAC35521.1| contains similarity to the N
            terminal domain of the E1 protein (Pfam: E1_N.hmm, score:
            12.36) [Arabidopsis thaliana] gi|7267769|emb|CAB81172.1|
            putative transcriptional regulator [Arabidopsis thaliana]
            gi|225898771|dbj|BAH30516.1| hypothetical protein
            [Arabidopsis thaliana] gi|332657519|gb|AEE82919.1| FACT
            complex subunit SPT16 [Arabidopsis thaliana]
          Length = 1074

 Score =  153 bits (386), Expect = 1e-34
 Identities = 103/272 (37%), Positives = 153/272 (56%), Gaps = 15/272 (5%)
 Frame = +2

Query: 563  GKETIVGTLEAHGNAFIY--TASSFRQHFYFNNITASFFRLGDERMPPLLHFQLHHPIMM 736
            G++ I GTLEAH N F Y  T    R    F NI  +FF+  ++ M  LLHF LH+ IM+
Sbjct: 691  GRKKIPGTLEAHANGFRYSTTRPDERVDVLFANIKHAFFQPAEKEMITLLHFHLHNHIMV 750

Query: 737  GTEVTKVIEFRL-----VQSPLGEKRSDHDSVKIEKVKQIRDEC--CNNQLMKFVDKVDA 895
            GT+ TK ++F +     VQS  G +RS +D  +I++ ++ RD     N     F ++V+ 
Sbjct: 751  GTKKTKDVQFYVEVMDVVQSLGGGRRSAYDPDEIDEEQRERDRKNKINMDFNHFANRVND 810

Query: 896  RWNF----QCKEPFDELEKKYEFYGVLPLKASSAAFALTLDHLIVLVGRPVSVFLLSDIE 1063
             W           FD+  ++  F+GV P K +SA    T   L+ L+  P  V  LS+IE
Sbjct: 811  MWQLPQFASLDLEFDQPLRELGFHGV-PHK-TSAFIIPTSSCLVELIEYPFLVVSLSEIE 868

Query: 1064 FVNLAQLRPGE--IDMTVIFQDFKEDKVLEINSIPLESLVGIKDRLNYLDVKYYVNSKKP 1237
             VNL ++  G+   DM +IF+DFK+D VL ++S+P  SL GIK+ L+  D+KYY +    
Sbjct: 869  IVNLERVGFGQKNFDMAIIFKDFKKD-VLRVDSVPTSSLEGIKEWLDTTDIKYYESKLNL 927

Query: 1238 EWKDILKNIAASPEEFIKNGGWDQYDLEDDDT 1333
             W+ ILK I   P+ FI +GGW+  +L+  D+
Sbjct: 928  NWRQILKTITDDPQSFIDDGGWEFLNLDGSDS 959


Top