BLASTX nr result

ID: Papaver23_contig00012709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00012709
         (2311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_199166.1| Helicase protein with RING/U-box domain [Arabid...   469   e-129
ref|XP_002865418.1| SNF2 domain-containing protein [Arabidopsis ...   468   e-129
ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricin...   468   e-129
ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-a...   466   e-128
ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-a...   466   e-128

>ref|NP_199166.1| Helicase protein with RING/U-box domain [Arabidopsis thaliana]
            gi|60390960|sp|Q9FIY7.1|SM3L3_ARATH RecName:
            Full=Putative SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member
            3-like 3; Short=SMARCA3-like protein 3
            gi|10178192|dbj|BAB11616.1| DNA repair protein-like
            [Arabidopsis thaliana] gi|332007595|gb|AED94978.1|
            Helicase protein with RING/U-box domain [Arabidopsis
            thaliana]
          Length = 1277

 Score =  469 bits (1208), Expect = e-129
 Identities = 224/336 (66%), Positives = 260/336 (77%)
 Frame = -3

Query: 1010 PSTLKCVLHSYQKEALYWMSKSEEGIDVEKAAKTLHPCWEVYRITDKRASEVYVNVFSGE 831
            PSTL C L  YQK+ALYWMS+SE+GIDVEKAA+TLHPCWE YRI D+RA  +Y+N+FSGE
Sbjct: 609  PSTLTCNLRPYQKQALYWMSESEKGIDVEKAAETLHPCWEAYRICDERAPSIYLNIFSGE 668

Query: 830  ATTQFPSATQSTRGGILADAMGLGKTVMTIALIHTRRGRGTPYSQEIVKHDPDQVXXXXX 651
            AT QFP+ATQ  RGGILADAMGLGKTVMTIALI  R GRG P +++++  D +       
Sbjct: 669  ATIQFPTATQMARGGILADAMGLGKTVMTIALILARPGRGNPENEDVLVADVNADKRNRK 728

Query: 650  XXXXXXXAPNVKGGTLIVCPMALLGQWKDELEAHSQPGTLGLYVQYGVDRTTHPNALAQH 471
                       KGGTLI+CPMALL QWKDELE HS+P T+ + V YG DRT    A+A H
Sbjct: 729  EIHMALTTVKAKGGTLIICPMALLSQWKDELETHSKPDTVSVLVYYGGDRTHDAKAIASH 788

Query: 470  DVVLTTYGVLAAACKSNAGDSIFHQVDWYRVVLDEAHTIKSSRTQVAQAAFSLSSFCRWC 291
            DVVLTTYGVL +A K +  +SIFH++DWYR+VLDEAHTIKS +TQ A+A F LSS CRWC
Sbjct: 789  DVVLTTYGVLTSAYKQDMANSIFHRIDWYRIVLDEAHTIKSWKTQAAKATFELSSHCRWC 848

Query: 290  LTGTPLQNNLEDLYSLLCFLHVEPWCNWAWWYKLIQRPYENGDERGIRLVKSILRSLMLX 111
            LTGTPLQN LEDLYSLLCFLHVEPWCNWAWW KLIQ+PYENGD RG++L+K+ILR LML 
Sbjct: 849  LTGTPLQNKLEDLYSLLCFLHVEPWCNWAWWSKLIQKPYENGDPRGLKLIKAILRPLMLR 908

Query: 110  XXXXXXXXKGRPILVLPPADIQVIECEQSDAERDFY 3
                    +G  IL LPP D+QVIECEQS+AERDFY
Sbjct: 909  RTKETRDKEGSLILELPPTDVQVIECEQSEAERDFY 944


>ref|XP_002865418.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297311253|gb|EFH41677.1| SNF2 domain-containing
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1305

 Score =  468 bits (1203), Expect = e-129
 Identities = 225/336 (66%), Positives = 259/336 (77%)
 Frame = -3

Query: 1010 PSTLKCVLHSYQKEALYWMSKSEEGIDVEKAAKTLHPCWEVYRITDKRASEVYVNVFSGE 831
            PSTL C L  YQK+ALYWMS+SE+GIDVEKAA+TLHPCWE YRI D+RA  +Y+N+FSGE
Sbjct: 637  PSTLTCNLRPYQKQALYWMSESEKGIDVEKAAETLHPCWEAYRICDERAPSIYLNIFSGE 696

Query: 830  ATTQFPSATQSTRGGILADAMGLGKTVMTIALIHTRRGRGTPYSQEIVKHDPDQVXXXXX 651
            AT QFP+ATQ  RGGILADAMGLGKTVMTIALI  R GRG P +++ +  D +       
Sbjct: 697  ATIQFPTATQMARGGILADAMGLGKTVMTIALILARPGRGNPGNEDGLAADVNADKRKRK 756

Query: 650  XXXXXXXAPNVKGGTLIVCPMALLGQWKDELEAHSQPGTLGLYVQYGVDRTTHPNALAQH 471
                       KGGTLI+CPMALL QWKDELE HS+P T+ + V YG DRT    A+A H
Sbjct: 757  ESHTALTIVKAKGGTLIICPMALLSQWKDELETHSKPDTVSVLVYYGGDRTHDAKAIASH 816

Query: 470  DVVLTTYGVLAAACKSNAGDSIFHQVDWYRVVLDEAHTIKSSRTQVAQAAFSLSSFCRWC 291
            DVVLTTYGVL +A K +  +SIFH++DWYR+VLDEAHTIKS +TQ A+A F LSS CRWC
Sbjct: 817  DVVLTTYGVLTSAYKQDMANSIFHRIDWYRIVLDEAHTIKSWKTQAAKATFELSSHCRWC 876

Query: 290  LTGTPLQNNLEDLYSLLCFLHVEPWCNWAWWYKLIQRPYENGDERGIRLVKSILRSLMLX 111
            LTGTPLQN LEDLYSLLCFLHVEPWCNWAWW KLIQ+PYENGD RG++L+K+ILR LML 
Sbjct: 877  LTGTPLQNKLEDLYSLLCFLHVEPWCNWAWWSKLIQKPYENGDSRGLKLIKAILRPLMLR 936

Query: 110  XXXXXXXXKGRPILVLPPADIQVIECEQSDAERDFY 3
                    +G  IL LPP DIQVIECEQS+AERDFY
Sbjct: 937  RTKETRDKEGSLILELPPTDIQVIECEQSEAERDFY 972


>ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricinus communis]
            gi|223531235|gb|EEF33080.1| DNA repair helicase rad5,16,
            putative [Ricinus communis]
          Length = 1051

 Score =  468 bits (1203), Expect = e-129
 Identities = 230/337 (68%), Positives = 259/337 (76%)
 Frame = -3

Query: 1013 PPSTLKCVLHSYQKEALYWMSKSEEGIDVEKAAKTLHPCWEVYRITDKRASEVYVNVFSG 834
            PP TL C L SYQK+ALYWMS+ E+GIDVEKAAKTLHPCW  YRI D RAS +Y+N+FSG
Sbjct: 398  PPHTLMCSLRSYQKQALYWMSECEKGIDVEKAAKTLHPCWAAYRICDARASSIYLNIFSG 457

Query: 833  EATTQFPSATQSTRGGILADAMGLGKTVMTIALIHTRRGRGTPYSQEIVKHDPDQVXXXX 654
            EATTQFP+ATQ  RGGILADAMGLGKTVMTI+LI  R G+G+  SQE             
Sbjct: 458  EATTQFPTATQMARGGILADAMGLGKTVMTISLILARPGKGSIDSQESTN---------- 507

Query: 653  XXXXXXXXAPNVKGGTLIVCPMALLGQWKDELEAHSQPGTLGLYVQYGVDRTTHPNALAQ 474
                        KGGTLIVCPMALLGQWKDELE HS+ G++ ++V YG  RTT P  ++ 
Sbjct: 508  --------TKKAKGGTLIVCPMALLGQWKDELETHSELGSISIFVHYGGFRTTDPRVISG 559

Query: 473  HDVVLTTYGVLAAACKSNAGDSIFHQVDWYRVVLDEAHTIKSSRTQVAQAAFSLSSFCRW 294
            HDVVLTTYGVL AA KS+   SIFH+V+WYR+VLDEAHTIKS +T  AQAAF LSS CRW
Sbjct: 560  HDVVLTTYGVLTAAYKSDLEHSIFHRVEWYRLVLDEAHTIKSWKTMGAQAAFKLSSHCRW 619

Query: 293  CLTGTPLQNNLEDLYSLLCFLHVEPWCNWAWWYKLIQRPYENGDERGIRLVKSILRSLML 114
            CLTGTPLQNNLEDLYSLLCFLHVEPW NWAWW KLIQRPYENGD RG++L+K+ILR LML
Sbjct: 620  CLTGTPLQNNLEDLYSLLCFLHVEPWFNWAWWSKLIQRPYENGDPRGMKLIKAILRPLML 679

Query: 113  XXXXXXXXXKGRPILVLPPADIQVIECEQSDAERDFY 3
                     +GRPILVLPP DIQ+IECE S+AE DFY
Sbjct: 680  RRTKETKDKEGRPILVLPPMDIQIIECEHSEAEHDFY 716


>ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 3-like
            [Vitis vinifera]
          Length = 1224

 Score =  466 bits (1199), Expect = e-128
 Identities = 225/337 (66%), Positives = 261/337 (77%), Gaps = 1/337 (0%)
 Frame = -3

Query: 1010 PSTLKCVLHSYQKEALYWMSKSEEGIDVEKAAKTLHPCWEVYRITDKRASEVYVNVFSGE 831
            PSTL C L  YQK+ALYWMS+ E+G D E+A KTLHPCW  Y+I D+RAS +YVN+FSGE
Sbjct: 553  PSTLMCDLRPYQKQALYWMSELEKGSDAEQAPKTLHPCWAAYQICDERASAIYVNIFSGE 612

Query: 830  ATTQFPSATQSTRGGILADAMGLGKTVMTIALIHTRRGRGTPYSQEIVKHDPDQVXXXXX 651
            ATTQ P+A    RGGILADAMGLGKTVMTIALI  R GR +    +++    D       
Sbjct: 613  ATTQLPTAIHMARGGILADAMGLGKTVMTIALILARPGRRSSGVHKLLTEAADDTEEAEK 672

Query: 650  XXXXXXXAP-NVKGGTLIVCPMALLGQWKDELEAHSQPGTLGLYVQYGVDRTTHPNALAQ 474
                   AP NVKGGTLIVCPMALL QWKDELE HS+P ++ +++ YG DRT  P  +++
Sbjct: 673  NTDSHTKAPLNVKGGTLIVCPMALLSQWKDELETHSKPESISIFIHYGGDRTNDPKVISE 732

Query: 473  HDVVLTTYGVLAAACKSNAGDSIFHQVDWYRVVLDEAHTIKSSRTQVAQAAFSLSSFCRW 294
            HDVVLTTYGVL +A K++   SIFH+V+WYRVVLDEAHTIKSS+T  AQAAF+L S CRW
Sbjct: 733  HDVVLTTYGVLTSAYKNDENSSIFHRVEWYRVVLDEAHTIKSSKTLSAQAAFALPSHCRW 792

Query: 293  CLTGTPLQNNLEDLYSLLCFLHVEPWCNWAWWYKLIQRPYENGDERGIRLVKSILRSLML 114
            CLTGTPLQNNLEDLYSLLCFLHVEPWCNWAWWYKLIQ+PYE GD+RG+RL+K+ILR LML
Sbjct: 793  CLTGTPLQNNLEDLYSLLCFLHVEPWCNWAWWYKLIQKPYECGDQRGLRLIKAILRPLML 852

Query: 113  XXXXXXXXXKGRPILVLPPADIQVIECEQSDAERDFY 3
                     +GRPILVLPP DIQVIECEQS+AE DFY
Sbjct: 853  RRTKDTKDKEGRPILVLPPTDIQVIECEQSEAEHDFY 889


>ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 3-like
            [Cucumis sativus] gi|449523563|ref|XP_004168793.1|
            PREDICTED: putative SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member
            3-like 3-like [Cucumis sativus]
          Length = 1113

 Score =  466 bits (1198), Expect = e-128
 Identities = 223/337 (66%), Positives = 262/337 (77%)
 Frame = -3

Query: 1013 PPSTLKCVLHSYQKEALYWMSKSEEGIDVEKAAKTLHPCWEVYRITDKRASEVYVNVFSG 834
            PP TL C L  YQK+AL+WMS+ E+GIDVEKAA+TLHPCW  YRI D+RA+ +YVN+FSG
Sbjct: 447  PPPTLTCDLRPYQKQALFWMSELEKGIDVEKAAQTLHPCWSAYRICDERATSIYVNIFSG 506

Query: 833  EATTQFPSATQSTRGGILADAMGLGKTVMTIALIHTRRGRGTPYSQEIVKHDPDQVXXXX 654
            E+TT+FP+ATQ  RGGILADAMGLGKTVMTIALI  R G+G P +Q+   +         
Sbjct: 507  ESTTKFPTATQMARGGILADAMGLGKTVMTIALILARMGKGCPDNQKSTVNKK-----VT 561

Query: 653  XXXXXXXXAPNVKGGTLIVCPMALLGQWKDELEAHSQPGTLGLYVQYGVDRTTHPNALAQ 474
                        +GGTLIVCPMALLGQWK+ELE HS+P ++ ++V YG DRT +P  L  
Sbjct: 562  TEKKSQKSTTKARGGTLIVCPMALLGQWKEELEIHSEPESISIFVHYGGDRTNNPEVLLG 621

Query: 473  HDVVLTTYGVLAAACKSNAGDSIFHQVDWYRVVLDEAHTIKSSRTQVAQAAFSLSSFCRW 294
            +DVVLTTYGVL +A KS+   SI+H+VDWYRVVLDEAHTIKSS+TQ AQAAF+L+S+CRW
Sbjct: 622  YDVVLTTYGVLTSAYKSDGEFSIYHRVDWYRVVLDEAHTIKSSKTQTAQAAFTLNSYCRW 681

Query: 293  CLTGTPLQNNLEDLYSLLCFLHVEPWCNWAWWYKLIQRPYENGDERGIRLVKSILRSLML 114
            CLTGTPLQNNLEDL+SLLCFL VEPWCNWAWW KLIQRPYENGD RG+RL+K+ILR LML
Sbjct: 682  CLTGTPLQNNLEDLFSLLCFLRVEPWCNWAWWNKLIQRPYENGDPRGLRLIKAILRPLML 741

Query: 113  XXXXXXXXXKGRPILVLPPADIQVIECEQSDAERDFY 3
                      GRPILVLPP DIQ + CEQS+AE DFY
Sbjct: 742  RRTKDTNDANGRPILVLPPTDIQTVMCEQSEAEHDFY 778


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