BLASTX nr result

ID: Papaver23_contig00012520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00012520
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519998.1| pentatricopeptide repeat-containing protein,...    95   9e-18
ref|XP_003538664.1| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17
ref|XP_004164250.1| PREDICTED: putative pentatricopeptide repeat...    90   3e-16
ref|XP_004146932.1| PREDICTED: putative pentatricopeptide repeat...    90   3e-16
ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containi...    89   7e-16

>ref|XP_002519998.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540762|gb|EEF42322.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 498

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 45/91 (49%), Positives = 67/91 (73%)
 Frame = -3

Query: 344 NLTILKHSSVNEEISRENYNILIRKRCKEGNVDKCMELLAQMESLGFHPNATSYNILIES 165
           ++T+  + S  +E+S E+YN  I   CK G+VDK M LLA M+SLGFHP++ SY  LIE+
Sbjct: 6   SVTMPTNESTGQELSGESYNSCICDCCKVGDVDKAMTLLADMQSLGFHPSSLSYTCLIET 65

Query: 164 LGNVGRTLEADSIFQEMKKCGFEPKVRAYNV 72
           L +VGRTLEA++++QEM   G +P+++ YN+
Sbjct: 66  LLSVGRTLEAEALYQEMMCFGLKPRLKLYNI 96


>ref|XP_003538664.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 881

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 52/122 (42%), Positives = 74/122 (60%), Gaps = 2/122 (1%)
 Frame = -3

Query: 368 FQKAAKTLNLTILKHSSV--NEEISRENYNILIRKRCKEGNVDKCMELLAQMESLGFHPN 195
           F    K++  T+ +   +  NEE+S    + LI + CKEG++D+ M LL+QME+ GFH +
Sbjct: 59  FDSKTKSIKTTLFRSPDIGENEELSSNLCSQLICECCKEGDLDRAMSLLSQMEAKGFHLS 118

Query: 194 ATSYNILIESLGNVGRTLEADSIFQEMKKCGFEPKVRAYNVXXXXXXXXXXXXLAYNVLN 15
           +TSY  LIE+LGNVGRT EAD +F+EM   G++PK+  Y+             LA  VL 
Sbjct: 119 STSYACLIEALGNVGRTSEADMLFKEMVCYGYKPKLNLYHSLLRGFLKKGLLGLANGVLK 178

Query: 14  EM 9
           EM
Sbjct: 179 EM 180


>ref|XP_004164250.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g36300-like [Cucumis sativus]
          Length = 433

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 47/79 (59%), Positives = 54/79 (68%)
 Frame = -3

Query: 311 EEISRENYNILIRKRCKEGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEAD 132
           EE+S E+ N LIR  CK G+VD  M LLA MES+G H   TSY  LIE+LGNVGRTLEAD
Sbjct: 77  EELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYLIEALGNVGRTLEAD 136

Query: 131 SIFQEMKKCGFEPKVRAYN 75
            IFQEM   G +P+    N
Sbjct: 137 IIFQEMISFGCKPRTVVCN 155


>ref|XP_004146932.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g36300-like [Cucumis sativus]
          Length = 455

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 47/79 (59%), Positives = 54/79 (68%)
 Frame = -3

Query: 311 EEISRENYNILIRKRCKEGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEAD 132
           EE+S E+ N LIR  CK G+VD  M LLA MES+G H   TSY  LIE+LGNVGRTLEAD
Sbjct: 77  EELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYTYLIEALGNVGRTLEAD 136

Query: 131 SIFQEMKKCGFEPKVRAYN 75
            IFQEM   G +P+    N
Sbjct: 137 IIFQEMISFGCKPRTVVCN 155


>ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Vitis vinifera]
          Length = 494

 Score = 89.0 bits (219), Expect = 7e-16
 Identities = 51/105 (48%), Positives = 66/105 (62%)
 Frame = -3

Query: 323 SSVNEEISRENYNILIRKRCKEGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRT 144
           S   EE+S   YN  IR+ C+ G+VDK M+LLAQME+LGF  +  SY  +IE+LG+VGRT
Sbjct: 15  SENGEELSGVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRT 74

Query: 143 LEADSIFQEMKKCGFEPKVRAYNVXXXXXXXXXXXXLAYNVLNEM 9
           LEA++IF+EM   G +  +R YNV            LA  VL EM
Sbjct: 75  LEAEAIFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEM 119


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