BLASTX nr result

ID: Papaver23_contig00011916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00011916
         (1192 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotei...    73   2e-10
ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc...    72   3e-10
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei...    72   3e-10
ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotei...    71   5e-10
ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|2...    71   5e-10

>ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Glycine max]
          Length = 2183

 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 38/94 (40%), Positives = 61/94 (64%)
 Frame = -2

Query: 1170 YDGIPFVPEKGFYQPSSENTREAYQALTSVIECYMKGRAPPHVLVSASDEVLSVLKSDIN 991
            +D +    + G YQP ++ TR AY+A+ SVI+  + G+ P  ++ +A+DE+L+VLK+D+ 
Sbjct: 102  HDSVLSASDDGVYQPKTKETRAAYEAMLSVIQNQLGGQ-PLSIVSAAADEILAVLKNDVV 160

Query: 990  FGYEKKQQIEKLIGLISVDTFQQLVAIANWITDY 889
               +KK+ IEKL+  I    F QLV+I   ITD+
Sbjct: 161  KNPDKKKDIEKLLNPIPGHVFDQLVSIGKLITDF 194


>ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
            200 kDa helicase-like [Cucumis sativus]
          Length = 2175

 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 39/92 (42%), Positives = 60/92 (65%)
 Frame = -2

Query: 1146 EKGFYQPSSENTREAYQALTSVIECYMKGRAPPHVLVSASDEVLSVLKSDINFGYEKKQQ 967
            E+G Y P ++ TR AY+A+ SVI+  + G+ P  ++  A+DE+L+VLK+D     +KK++
Sbjct: 108  EEGVYMPKTKETRAAYEAMLSVIQQQLGGQ-PLSIVSGAADEILAVLKNDSFKNPDKKKE 166

Query: 966  IEKLIGLISVDTFQQLVAIANWITDYTNPRPA 871
            IEKL+  I  + F QLV+I   ITDY +   A
Sbjct: 167  IEKLLNPIPNNVFDQLVSIGRLITDYQDGNDA 198



 Score = 60.5 bits (145), Expect = 8e-07
 Identities = 54/188 (28%), Positives = 78/188 (41%)
 Frame = -2

Query: 825 YRPSNEANWRSYNLFLDAFKQLIGDQPDLVLRVAADSALLVLRNVDTPTEYRKHVIESEL 646
           Y P  +    +Y   L   +Q +G QP  ++  AAD  L VL+N       +K  IE  L
Sbjct: 112 YMPKTKETRAAYEAMLSVIQQQLGGQPLSIVSGAADEILAVLKNDSFKNPDKKKEIEKLL 171

Query: 645 GPASRNWFDHLSSLANLITDYPPLPSPSWETTAGTNFYPHEFSLVKKEVEKIDIPEDYFD 466
            P   N FD L S+  LITDY      +   TA  +                 + +D   
Sbjct: 172 NPIPNNVFDQLVSIGRLITDYQDGNDATGPATANGDG---------------ALDDDIGV 216

Query: 465 SVKFDFEDDVMASDSSLEEEDEKVLRSPYDLTATNDSDDQGTVQGWMKDLTDDDFQEVKV 286
           +V+F+  ++   SD  + +EDE+      D+   N S       G    + DDD QE   
Sbjct: 217 AVEFEENEEEEESDLDMVQEDEE---DEDDVAEPNGSGAMQMDGG----IDDDDLQENDG 269

Query: 285 GMQNLRVE 262
           GM NL V+
Sbjct: 270 GM-NLNVQ 276


>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Cucumis sativus]
          Length = 2175

 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 39/92 (42%), Positives = 60/92 (65%)
 Frame = -2

Query: 1146 EKGFYQPSSENTREAYQALTSVIECYMKGRAPPHVLVSASDEVLSVLKSDINFGYEKKQQ 967
            E+G Y P ++ TR AY+A+ SVI+  + G+ P  ++  A+DE+L+VLK+D     +KK++
Sbjct: 108  EEGVYMPKTKETRAAYEAMLSVIQQQLGGQ-PLSIVSGAADEILAVLKNDSFKNPDKKKE 166

Query: 966  IEKLIGLISVDTFQQLVAIANWITDYTNPRPA 871
            IEKL+  I  + F QLV+I   ITDY +   A
Sbjct: 167  IEKLLNPIPNNVFDQLVSIGRLITDYQDGNDA 198



 Score = 60.5 bits (145), Expect = 8e-07
 Identities = 54/188 (28%), Positives = 78/188 (41%)
 Frame = -2

Query: 825 YRPSNEANWRSYNLFLDAFKQLIGDQPDLVLRVAADSALLVLRNVDTPTEYRKHVIESEL 646
           Y P  +    +Y   L   +Q +G QP  ++  AAD  L VL+N       +K  IE  L
Sbjct: 112 YMPKTKETRAAYEAMLSVIQQQLGGQPLSIVSGAADEILAVLKNDSFKNPDKKKEIEKLL 171

Query: 645 GPASRNWFDHLSSLANLITDYPPLPSPSWETTAGTNFYPHEFSLVKKEVEKIDIPEDYFD 466
            P   N FD L S+  LITDY      +   TA  +                 + +D   
Sbjct: 172 NPIPNNVFDQLVSIGRLITDYQDGNDATGPATANGDG---------------ALDDDIGV 216

Query: 465 SVKFDFEDDVMASDSSLEEEDEKVLRSPYDLTATNDSDDQGTVQGWMKDLTDDDFQEVKV 286
           +V+F+  ++   SD  + +EDE+      D+   N S       G    + DDD QE   
Sbjct: 217 AVEFEENEEEEESDLDMVQEDEE---DEDDVAEPNGSGAMQMDGG----IDDDDLQENDG 269

Query: 285 GMQNLRVE 262
           GM NL V+
Sbjct: 270 GM-NLNVQ 276


>ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Glycine max]
          Length = 2183

 Score = 71.2 bits (173), Expect = 5e-10
 Identities = 38/94 (40%), Positives = 60/94 (63%)
 Frame = -2

Query: 1170 YDGIPFVPEKGFYQPSSENTREAYQALTSVIECYMKGRAPPHVLVSASDEVLSVLKSDIN 991
            +D +    + G YQP ++ TR AY+A+ SVI+  + G+ P  ++ +A+DE+L+VLK+D  
Sbjct: 102  HDSVLSTSDDGVYQPKTKETRAAYEAMLSVIQNQLGGQ-PLSIVSAAADEILAVLKNDTV 160

Query: 990  FGYEKKQQIEKLIGLISVDTFQQLVAIANWITDY 889
               +KK+ IEKL+  I    F QLV+I   ITD+
Sbjct: 161  KNPDKKKDIEKLLNPIPGHVFDQLVSIGKLITDF 194


>ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|222869248|gb|EEF06379.1|
            predicted protein [Populus trichocarpa]
          Length = 2157

 Score = 71.2 bits (173), Expect = 5e-10
 Identities = 36/86 (41%), Positives = 62/86 (72%)
 Frame = -2

Query: 1146 EKGFYQPSSENTREAYQALTSVIECYMKGRAPPHVLVSASDEVLSVLKSDINFGYEKKQQ 967
            E+G YQP ++ TR AY+A+ SVI+  + G+ P +++ +A+DE+L+VLK++     +K+++
Sbjct: 108  EEGVYQPKTKETRAAYEAMLSVIQQQLGGQ-PLNIVSAAADEILAVLKNESVRTQDKRKE 166

Query: 966  IEKLIGLISVDTFQQLVAIANWITDY 889
            IEKL+  I  + F+Q+V+I   ITDY
Sbjct: 167  IEKLLNPIPNNMFEQVVSIGRLITDY 192


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