BLASTX nr result

ID: Papaver23_contig00011900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00011900
         (1068 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc...   357   3e-96
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]   337   2e-90
ref|NP_001061583.1| Os08g0338200 [Oryza sativa Japonica Group] g...   326   7e-87
gb|EEC83408.1| hypothetical protein OsI_28861 [Oryza sativa Indi...   326   7e-87
dbj|BAK05807.1| predicted protein [Hordeum vulgare subsp. vulgare]    318   1e-84

>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Vitis vinifera]
           gi|296090002|emb|CBI39821.3| unnamed protein product
           [Vitis vinifera]
          Length = 602

 Score =  357 bits (916), Expect = 3e-96
 Identities = 193/302 (63%), Positives = 227/302 (75%), Gaps = 3/302 (0%)
 Frame = -2

Query: 899 SGQVVMRARYKNNGVKDPGVQGVLIMTEDKLDFSPDDPMPSAKLNVGFRSIKGHKFSREG 720
           SG+V+ RARYK + VKD GV GVL MTEDK  F P+DP  SA+ +V FR IKGHKFS+ G
Sbjct: 2   SGEVLKRARYKTS-VKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGG 60

Query: 719 SQKQALLMLTGSDKN---YTFEFDKFTERDICRDFVGKVLGKIQAKESSASDAKVDPEKS 549
           S K ALL LT   +    Y FEF+ + +R++CR+FVG+ L    AK S AS  K   E+S
Sbjct: 61  SNKPALLNLTQDSEKGGGYIFEFENYPDREVCREFVGRAL----AKFSEAS--KAGSEQS 114

Query: 548 ATTLHDEQLRPEEMKLRMKLLAENSELQKLHKQFVIGGVLTEAEFWATRKKLLAVDGSKM 369
           A  L DEQL   EM+ R+KLL E+SELQKLHKQFV+ GVLTEAEFWATRKKLL  + S+ 
Sbjct: 115 AVKLFDEQLSTIEMERRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRT 174

Query: 368 SKQRLGFKSAMLADVRPLTDGRTNKVTFSLTPEIIQQIFTEKPAVHQAFLKFVPSKMTEK 189
           SKQR+GFKSAM++D++PLTDGRTN+VTF+LTPEII QIF EKPAVHQAFL FVP+KMTEK
Sbjct: 175 SKQRVGFKSAMISDLKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEK 234

Query: 188 DFWTKYCRAEFLHRTKNXXXXXXXXXXXXXXAVFLKQDAILAGEARQKIRRVDPTLDMEA 9
           DFW KYCRAE+LH T+N              AVFLK D ILA EAR+KIRRVDPTLDMEA
Sbjct: 235 DFWNKYCRAEYLHCTRNTVAAAAEAAEDEELAVFLKHDDILANEARRKIRRVDPTLDMEA 294

Query: 8   DE 3
           D+
Sbjct: 295 DQ 296


>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
          Length = 735

 Score =  337 bits (865), Expect = 2e-90
 Identities = 194/345 (56%), Positives = 227/345 (65%), Gaps = 46/345 (13%)
 Frame = -2

Query: 899  SGQVVMRARYKNNGVKDPGVQGVLIMTEDKLDFSPDDPMPSAKLNVGFRSIKGHKFSREG 720
            SG+V+ RARYK + VKD GV GVL MTEDK  F P+DP  SA+ +V FR IKGHKFS+ G
Sbjct: 2    SGEVLKRARYKTS-VKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGG 60

Query: 719  SQKQALLMLTGSDKN---YTFEFDKFTERDICRDFVGKVLGKIQAKESSASDAKVDPEKS 549
            S K ALL LT   +    Y FEF+ + +R++CR+FVGK L    AK S AS  K   E+S
Sbjct: 61   SNKPALLNLTQDSEKGGGYIFEFENYPDREVCREFVGKAL----AKFSEAS--KAGSEQS 114

Query: 548  ATTLHDEQLRPEEMKLRMKLLAEN------------------------------------ 477
            A  L DEQL   EM+ R+KLL E+                                    
Sbjct: 115  AVKLFDEQLSTIEMERRIKLLREDRHSVPEEKFGVLLLKGILPLFGETIIAMKLIDSGIA 174

Query: 476  -------SELQKLHKQFVIGGVLTEAEFWATRKKLLAVDGSKMSKQRLGFKSAMLADVRP 318
                   SELQKLHKQFV+ GVLTEAEFWATRKKLL  + S+ SKQR+GFKSAM++D++P
Sbjct: 175  SKVKWDCSELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQRVGFKSAMISDLKP 234

Query: 317  LTDGRTNKVTFSLTPEIIQQIFTEKPAVHQAFLKFVPSKMTEKDFWTKYCRAEFLHRTKN 138
            LTDGRTN+VTF+LTPEII QIF EKPAVHQAFL FVP+KMTEKDFW KYCRAE+LH T+N
Sbjct: 235  LTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLHCTRN 294

Query: 137  XXXXXXXXXXXXXXAVFLKQDAILAGEARQKIRRVDPTLDMEADE 3
                          AVFLK D ILA EAR+KIRRVDPTLDMEAD+
Sbjct: 295  TVAAAAEAAEDEELAVFLKHDDILASEARRKIRRVDPTLDMEADQ 339


>ref|NP_001061583.1| Os08g0338200 [Oryza sativa Japonica Group]
           gi|38636938|dbj|BAD03200.1| unknown protein [Oryza
           sativa Japonica Group] gi|113623552|dbj|BAF23497.1|
           Os08g0338200 [Oryza sativa Japonica Group]
           gi|215686948|dbj|BAG90767.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 604

 Score =  326 bits (835), Expect = 7e-87
 Identities = 182/302 (60%), Positives = 208/302 (68%), Gaps = 5/302 (1%)
 Frame = -2

Query: 896 GQVVMRARYKNNGVKDPGVQGVLIMTEDKLDFSPDDPMPSAKLNVGFRSIKGHKFSREGS 717
           G + + A+YK   +KDPG  GVL M EDK  F+P DP  + KLNV FRSIKGHKF++   
Sbjct: 2   GSMTIGAKYKTT-LKDPGTTGVLRMNEDKFTFTPHDPRSAMKLNVDFRSIKGHKFNKVDG 60

Query: 716 QKQALLMLT---GSDKN--YTFEFDKFTERDICRDFVGKVLGKIQAKESSASDAKVDPEK 552
            K A  +L     SDK   Y FEFD  T RD+ RDFV KVLGK Q   +      V PE 
Sbjct: 61  SKPAPPLLNLSKDSDKGGGYMFEFDNVTNRDLSRDFVAKVLGKQQG--TIPPKPNVPPEN 118

Query: 551 SATTLHDEQLRPEEMKLRMKLLAENSELQKLHKQFVIGGVLTEAEFWATRKKLLAVDGSK 372
           S T+  +EQL   EM+ RMKLL E+SELQKLH +FV+G +L E+EFWATRK LL  + +K
Sbjct: 119 SVTSTGEEQLSAAEMQRRMKLLQEDSELQKLHMKFVLGNILQESEFWATRKNLLEDEANK 178

Query: 371 MSKQRLGFKSAMLADVRPLTDGRTNKVTFSLTPEIIQQIFTEKPAVHQAFLKFVPSKMTE 192
            SKQR GFKSAMLADVRP  DGRTNKVTFSLT EII QIF EKPAVH+AFL FVP KM+E
Sbjct: 179 GSKQRPGFKSAMLADVRPSADGRTNKVTFSLTTEIIHQIFAEKPAVHRAFLDFVPKKMSE 238

Query: 191 KDFWTKYCRAEFLHRTKNXXXXXXXXXXXXXXAVFLKQDAILAGEARQKIRRVDPTLDME 12
           KDFWTKY RAE+L RTKN              A+FLK D ILA EAR KI+RVDPTLDME
Sbjct: 239 KDFWTKYFRAEYLLRTKNTVAATAEAAEDEELAIFLKNDDILAKEARLKIKRVDPTLDME 298

Query: 11  AD 6
           AD
Sbjct: 299 AD 300


>gb|EEC83408.1| hypothetical protein OsI_28861 [Oryza sativa Indica Group]
           gi|222640385|gb|EEE68517.1| hypothetical protein
           OsJ_26954 [Oryza sativa Japonica Group]
          Length = 625

 Score =  326 bits (835), Expect = 7e-87
 Identities = 182/302 (60%), Positives = 208/302 (68%), Gaps = 5/302 (1%)
 Frame = -2

Query: 896 GQVVMRARYKNNGVKDPGVQGVLIMTEDKLDFSPDDPMPSAKLNVGFRSIKGHKFSREGS 717
           G + + A+YK   +KDPG  GVL M EDK  F+P DP  + KLNV FRSIKGHKF++   
Sbjct: 2   GSMTIGAKYKTT-LKDPGTTGVLRMNEDKFTFTPHDPRSAMKLNVDFRSIKGHKFNKVDG 60

Query: 716 QKQALLMLT---GSDKN--YTFEFDKFTERDICRDFVGKVLGKIQAKESSASDAKVDPEK 552
            K A  +L     SDK   Y FEFD  T RD+ RDFV KVLGK Q   +      V PE 
Sbjct: 61  SKPAPPLLNLSKDSDKGGGYMFEFDNVTNRDLSRDFVAKVLGKQQG--TIPPKPNVPPEN 118

Query: 551 SATTLHDEQLRPEEMKLRMKLLAENSELQKLHKQFVIGGVLTEAEFWATRKKLLAVDGSK 372
           S T+  +EQL   EM+ RMKLL E+SELQKLH +FV+G +L E+EFWATRK LL  + +K
Sbjct: 119 SVTSTGEEQLSAAEMQRRMKLLQEDSELQKLHMKFVLGNILQESEFWATRKNLLEDEANK 178

Query: 371 MSKQRLGFKSAMLADVRPLTDGRTNKVTFSLTPEIIQQIFTEKPAVHQAFLKFVPSKMTE 192
            SKQR GFKSAMLADVRP  DGRTNKVTFSLT EII QIF EKPAVH+AFL FVP KM+E
Sbjct: 179 GSKQRPGFKSAMLADVRPSADGRTNKVTFSLTTEIIHQIFAEKPAVHRAFLDFVPKKMSE 238

Query: 191 KDFWTKYCRAEFLHRTKNXXXXXXXXXXXXXXAVFLKQDAILAGEARQKIRRVDPTLDME 12
           KDFWTKY RAE+L RTKN              A+FLK D ILA EAR KI+RVDPTLDME
Sbjct: 239 KDFWTKYFRAEYLLRTKNTVAATAEAAEDEELAIFLKNDDILAKEARLKIKRVDPTLDME 298

Query: 11  AD 6
           AD
Sbjct: 299 AD 300


>dbj|BAK05807.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  318 bits (816), Expect = 1e-84
 Identities = 179/302 (59%), Positives = 213/302 (70%), Gaps = 5/302 (1%)
 Frame = -2

Query: 896 GQVVMRARYKNNGVKDPGVQGVLIMTEDKLDFSPDDPMPSAKLNVGFRSIKGHKFSREGS 717
           G + + A+YK   +KDPG  GVL M+EDKL F+P+DP    KL+V FRSIKGHKF++   
Sbjct: 2   GTMTIGAKYKTT-LKDPGHGGVLRMSEDKLIFTPNDPRSLMKLSVDFRSIKGHKFNKVDG 60

Query: 716 QKQA--LLMLTG-SDKN--YTFEFDKFTERDICRDFVGKVLGKIQAKESSASDAKVDPEK 552
            K    LL L+  SDK   Y FEFD    RD+CRDFV +VLGK Q    +  +  V PEK
Sbjct: 61  SKPTPPLLNLSKVSDKGGGYIFEFDNVGNRDLCRDFVARVLGKHQGTVPARPN--VPPEK 118

Query: 551 SATTLHDEQLRPEEMKLRMKLLAENSELQKLHKQFVIGGVLTEAEFWATRKKLLAVDGSK 372
            A +   EQL   EM+ RMKLL E+SELQKLHK+FV+G +L E+EFWATRK LL  + +K
Sbjct: 119 LAVSTGPEQLSSAEMERRMKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDETNK 178

Query: 371 MSKQRLGFKSAMLADVRPLTDGRTNKVTFSLTPEIIQQIFTEKPAVHQAFLKFVPSKMTE 192
            SKQ+ GFKSAMLADVRP  DG+TNKVTFSLT EII QIF EKPAVH+AFL +VP K++E
Sbjct: 179 SSKQKPGFKSAMLADVRPSADGQTNKVTFSLTTEIIHQIFAEKPAVHRAFLDYVPKKLSE 238

Query: 191 KDFWTKYCRAEFLHRTKNXXXXXXXXXXXXXXAVFLKQDAILAGEARQKIRRVDPTLDME 12
           KDFWTKYCRAE+L RTKN              A+FLK D ILA EA+ KI+RVDPTLDME
Sbjct: 239 KDFWTKYCRAEYLLRTKNTLAAKAEAADDEELAMFLKNDDILAKEAKLKIKRVDPTLDME 298

Query: 11  AD 6
           AD
Sbjct: 299 AD 300


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