BLASTX nr result

ID: Papaver23_contig00011871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00011871
         (1479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23350.3| unnamed protein product [Vitis vinifera]              397   e-108
ref|XP_002312205.1| predicted protein [Populus trichocarpa] gi|2...   363   5e-98
ref|XP_002871712.1| hypothetical protein ARALYDRAFT_909607 [Arab...   353   6e-95
ref|NP_197131.2| cohesin complex subunit SCC1 [Arabidopsis thali...   350   4e-94
ref|XP_002514774.1| cohesin subunit rad21, putative [Ricinus com...   349   1e-93

>emb|CBI23350.3| unnamed protein product [Vitis vinifera]
          Length = 1133

 Score =  397 bits (1019), Expect = e-108
 Identities = 233/389 (59%), Positives = 271/389 (69%), Gaps = 8/389 (2%)
 Frame = +3

Query: 303  MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 482
            MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL
Sbjct: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60

Query: 483  LGVVRIYSRKVNYLFHDCSEALLQVKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDLE 662
            LGVVRIYSRKVNYLF DCSEALL++KQAFRSTAVDLPPEESTAPYHSITLPETFDLDD E
Sbjct: 61   LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120

Query: 663  LPDNDI-QGNYVDHHVSSREQITLQDTMEGVVYSTSQFGLDERFGDGDTSQIGLDLEEDL 839
            LPDNDI QGNYVDHHVS+REQITLQDTMEGVVYSTSQFGLDERFGDGDTSQIGLDL+EDL
Sbjct: 121  LPDNDIFQGNYVDHHVSTREQITLQDTMEGVVYSTSQFGLDERFGDGDTSQIGLDLDEDL 180

Query: 840  FLDKGSPSRSTAALVEMDEDPQESGQAMTPYTPFPDIDMDDEENRFVEDRAAEASEHMLV 1019
            FLDK S       L+ +D DPQ S   + P                 +D  +EA+     
Sbjct: 181  FLDKVSAPGHAGVLLGLDADPQASVHPIIP---------------LQKDVISEATA---- 221

Query: 1020 DINGEPQNQMEADEPSRDLIGGEKVPSTPGLVDEDVSANGHVQEVITTDTTCDLQLGSEN 1199
              NG   NQ+E    S D++   + PSTPGLV+E   ++  VQE +     CD  L  E+
Sbjct: 222  -ANG-IGNQIEGLAASTDVMEYAQAPSTPGLVEEPNLSS--VQEAL----ACDDHLEPED 273

Query: 1200 CDPAKLVDKENIGSPSHISN-HQNE----DTHIELESTTDVLMSNGDDRSN--LGKEQVV 1358
             +  +LV KEN+ + S +S+ H  +    D  +  ++  D ++S   D +   LG++++ 
Sbjct: 274  HNLTELVAKENLENASSVSSLHYGDKVAADWTLLNDTNHDAVLSIPADENGYLLGEQKIK 333

Query: 1359 QDKQHEDSPSTVVASDPVPSDPAGTMSSP 1445
            Q K   DSPS  V          G  ++P
Sbjct: 334  QAKPQGDSPSVAVTDQISSECSVGKAAAP 362


>ref|XP_002312205.1| predicted protein [Populus trichocarpa] gi|222852025|gb|EEE89572.1|
            predicted protein [Populus trichocarpa]
          Length = 1208

 Score =  363 bits (933), Expect = 5e-98
 Identities = 208/327 (63%), Positives = 240/327 (73%), Gaps = 2/327 (0%)
 Frame = +3

Query: 303  MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 482
            MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL
Sbjct: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60

Query: 483  LGVVRIYSRKVNYLFHDCSEALLQVKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDLE 662
            LGVVRIYSRKV+YLF DCSEALL+VKQAFRSTAVDLPPEESTAPYHSITLPETFDLDD E
Sbjct: 61   LGVVRIYSRKVSYLFDDCSEALLKVKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120

Query: 663  LPDNDI-QGNYVDHHVSSREQITLQDTMEGVVYSTSQFGLDERFGDGDTSQIGLDLEEDL 839
            LPDNDI QGNYVDHH+S+REQITLQDTM+GVVYSTSQFGLDERFGDGDTS + LDLEEDL
Sbjct: 121  LPDNDIFQGNYVDHHISTREQITLQDTMDGVVYSTSQFGLDERFGDGDTSHVDLDLEEDL 180

Query: 840  FLDKGSPSRSTAALVEMDEDPQESGQAMTPYTPFPDIDMDDEENRFVEDRAAEASEHMLV 1019
            FLDK +  R +          Q S +++ P          +E++  +    AEA     +
Sbjct: 181  FLDKVAAPRLSL---------QTSAESLEPKV--------EEDHDVI--GTAEA-----M 216

Query: 1020 DINGEPQNQMEADEPSRDLIGGEKVPSTPGLVDEDVSANGHVQEVITTDTTCDLQLGSEN 1199
             +NG  +N+M +   + + +   + PSTPGLV+E   ++      +     CD  L SE+
Sbjct: 217  PVNG-TRNKMVSQASNSESLDYAQAPSTPGLVEEPNLSS------VQDGLACDDHLKSED 269

Query: 1200 CDPAKLVDK-ENIGSPSHISNHQNEDT 1277
                KL D  E+ G+ S   NH  +DT
Sbjct: 270  ---NKLTDGIESTGNASSKPNHHRDDT 293


>ref|XP_002871712.1| hypothetical protein ARALYDRAFT_909607 [Arabidopsis lyrata subsp.
            lyrata] gi|297317549|gb|EFH47971.1| hypothetical protein
            ARALYDRAFT_909607 [Arabidopsis lyrata subsp. lyrata]
          Length = 1030

 Score =  353 bits (906), Expect = 6e-95
 Identities = 211/388 (54%), Positives = 245/388 (63%), Gaps = 1/388 (0%)
 Frame = +3

Query: 303  MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 482
            MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFP+ PIALRLSSHLL
Sbjct: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEAPIALRLSSHLL 60

Query: 483  LGVVRIYSRKVNYLFHDCSEALLQVKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDLE 662
            LGVVRIYSRKVNYLF DCSEALL+VKQAFRS AVDLPPEESTAPYHSITLPETFDLDD E
Sbjct: 61   LGVVRIYSRKVNYLFDDCSEALLKVKQAFRSAAVDLPPEESTAPYHSITLPETFDLDDFE 120

Query: 663  LPDNDI-QGNYVDHHVSSREQITLQDTMEGVVYSTSQFGLDERFGDGDTSQIGLDLEEDL 839
            LPDN+I QGNYVDHHVS+REQITLQDTM+GVVYSTSQFGLDERFGDGDTSQ  LDL+E +
Sbjct: 121  LPDNEIFQGNYVDHHVSTREQITLQDTMDGVVYSTSQFGLDERFGDGDTSQAALDLDEAV 180

Query: 840  FLDKGSPSRSTAALVEMDEDPQESGQAMTPYTPFPDIDMDDEENRFVEDRAAEASEHMLV 1019
            F DK          V   +D    G     Y         D     ++D     SE M  
Sbjct: 181  FQDKD---------VIGSDDEGVPGNDHNVYL--------DAATPGIKDSMEGVSEAMPR 223

Query: 1020 DINGEPQNQMEADEPSRDLIGGEKVPSTPGLVDEDVSANGHVQEVITTDTTCDLQLGSEN 1199
            D N E   Q+E    + + I   + P TPGLV  +V  +  V+E +  D    +++   N
Sbjct: 224  DFNEE---QVEDLAMNNEFIEDAQAPQTPGLV--EVPNSSSVREQLACDD--HMEVEDLN 276

Query: 1200 CDPAKLVDKENIGSPSHISNHQNEDTHIELESTTDVLMSNGDDRSNLGKEQVVQDKQHED 1379
             +  K    E   +  H    + ED   E  +    +     D+S + +    Q++  E+
Sbjct: 277  AEEGKKASGELDANEMH---KRGEDLSSEYNAPESAVTPVEVDKSQIDENVNTQNEPEEE 333

Query: 1380 SPSTVVASDPVPSDPAGTMSSPTSVLVE 1463
                V  + P  S     M  P  V+ E
Sbjct: 334  RAEHVHVTSPCCSHITTEMEDPGQVMTE 361


>ref|NP_197131.2| cohesin complex subunit SCC1 [Arabidopsis thaliana]
            gi|18157649|gb|AAL62060.1|AF400129_1 RAD21-3 [Arabidopsis
            thaliana] gi|332004884|gb|AED92267.1| cohesin complex
            subunit SCC1 [Arabidopsis thaliana]
          Length = 1031

 Score =  350 bits (899), Expect = 4e-94
 Identities = 211/395 (53%), Positives = 252/395 (63%), Gaps = 8/395 (2%)
 Frame = +3

Query: 303  MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 482
            MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFP+ PIALRLSSHLL
Sbjct: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEAPIALRLSSHLL 60

Query: 483  LGVVRIYSRKVNYLFHDCSEALLQVKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDLE 662
            LGVVRIYSRKVNYLF DCSEALL+VKQAFRS AVDLPPEESTAPYHSITLPETFDLDD E
Sbjct: 61   LGVVRIYSRKVNYLFDDCSEALLKVKQAFRSAAVDLPPEESTAPYHSITLPETFDLDDFE 120

Query: 663  LPDNDI-QGNYVDHHVSSREQITLQDTMEGVVYSTSQFGLDERFGDGDTSQIGLDLEEDL 839
            LPDN+I QGNYVDHHVS++EQITLQDTM+GVVYSTSQFGLDERFGDGDTSQ  LDL+E +
Sbjct: 121  LPDNEIFQGNYVDHHVSTKEQITLQDTMDGVVYSTSQFGLDERFGDGDTSQAALDLDEAV 180

Query: 840  FLDKGSPSRSTAALVEMDEDPQESGQAMTPYTPFPDIDMD---DEENRFVEDRAAEASEH 1010
            F DK         ++  D++              P ID +   D     ++D     SE 
Sbjct: 181  FQDKD--------VIGSDDE------------GVPGIDHNAYLDAAAPGIKDSMEGVSEA 220

Query: 1011 MLVDINGEPQNQMEADEPSRDLIGGEKVPSTPGLVDEDVSANGHVQEVITTDTTCDLQLG 1190
            M +D N E   Q+E    + + I   + P TPGLV  +V  +  V+E +  D        
Sbjct: 221  MPMDFNEE---QVEDLAMNNEFIEDAQAPQTPGLV--EVPNSSSVREQMACD-------- 267

Query: 1191 SENCDPAKLVDKENIGSPSHISNHQ----NEDTHIELESTTDVLMSNGDDRSNLGKEQVV 1358
             ++ D   L  +E I S   ++ ++     ED   E  +    +     D+S + +    
Sbjct: 268  -DHMDVEDLNAEEGIKSSGELNANEMPKRGEDLSSEYNAPESAVTPVEVDKSQIDENVNT 326

Query: 1359 QDKQHEDSPSTVVASDPVPSDPAGTMSSPTSVLVE 1463
            Q++  E+    V  + P  S     M  P  V+ E
Sbjct: 327  QNEPEEERAEHVHVTSPCCSHITTEMEDPGQVMNE 361


>ref|XP_002514774.1| cohesin subunit rad21, putative [Ricinus communis]
            gi|223545825|gb|EEF47328.1| cohesin subunit rad21,
            putative [Ricinus communis]
          Length = 1247

 Score =  349 bits (895), Expect = 1e-93
 Identities = 211/399 (52%), Positives = 256/399 (64%), Gaps = 7/399 (1%)
 Frame = +3

Query: 303  MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 482
            MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFP+VPIALRLSSHLL
Sbjct: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLL 60

Query: 483  LGVVRIYSRKVNYLFHDCSEALLQVKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDLE 662
            LGVVRIYSRKVNYLF DCSEALL++KQAFRSTAVDLPPEESTAPYHSITLPETFDLDD E
Sbjct: 61   LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120

Query: 663  LPDNDI-QGNYVDHHVSSREQITLQDTMEGVVYSTSQFGLDERFGDGDTSQIGLDLEEDL 839
            LPDNDI QGNY+DHHVS+REQITLQDTM+G VYSTSQFGLDERFGDGDTSQ+GLDLEE +
Sbjct: 121  LPDNDIFQGNYIDHHVSTREQITLQDTMDGAVYSTSQFGLDERFGDGDTSQVGLDLEEVI 180

Query: 840  FLDKGSPSRSTAALVEMDEDPQESGQAMTPYTPFPDIDMDDEENRFVEDRAAEASEHMLV 1019
             L         +   +   D Q S + + P            +     +R    SE M  
Sbjct: 181  LL------IIMSIFSDCRNDAQTSVELLEP-----------SKTVASHERMTGTSEEM-- 221

Query: 1020 DINGEPQNQMEADEPSRDLIGGEKVPSTPGLVDEDVSANGHVQEVITTDTTCDLQLGSEN 1199
             +NG  ++++E    + ++I   + PSTPGL++E   ++      +     CD  L SE+
Sbjct: 222  PLNG-TRSKIEDLAANLEVIDYAQAPSTPGLMEEPNLSS------VKDCLVCDDHLESED 274

Query: 1200 CDPAKLVDKE-NIGSPSHISNHQNEDTH-----IELESTTDVLMSNGDDRSNLGKEQVVQ 1361
             +   L   E +  +PS  + H  +D         L   T   M   +     G  ++ Q
Sbjct: 275  HNVRGLGGMEISKNAPSKSALHHGDDARDLSLVDHLSHDTIAYMPTEEHSRLSGDLEINQ 334

Query: 1362 DKQHEDSPSTVVASDPVPSDPAGTMSSPTSVLVEQTKPV 1478
                 +  ST V S+  P+D   +    +  + ++ K V
Sbjct: 335  AGLEGELLSTAVTSEHGPADETVSRQDESHQIEDKNKVV 373


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