BLASTX nr result
ID: Papaver23_contig00011836
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00011836
(1314 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002318930.1| global transcription factor group [Populus t... 134 1e-29
ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinu... 129 3e-29
ref|XP_003561547.1| PREDICTED: FACT complex subunit SPT16-like [... 128 4e-29
ref|XP_003557719.1| PREDICTED: FACT complex subunit SPT16-like [... 128 4e-29
ref|XP_002330007.1| global transcription factor group [Populus t... 134 5e-29
>ref|XP_002318930.1| global transcription factor group [Populus trichocarpa]
gi|222857306|gb|EEE94853.1| global transcription factor
group [Populus trichocarpa]
Length = 1082
Score = 134 bits (337), Expect(2) = 1e-29
Identities = 92/223 (41%), Positives = 120/223 (53%), Gaps = 13/223 (5%)
Frame = -3
Query: 925 LMYNNVKHAFFQDGDEKMSPFLHLHLHNPFMLEAEMTKDIQFRM-----VQTFFEGRRRK 761
+M++N+KHAFFQ +++M LH HLHN M+ + TKD+QF + VQT G+R
Sbjct: 717 IMFSNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRS- 775
Query: 760 GPLALDSDKLNKE-RQDTVDNQLKQKFVWKVILYGDLLLRLNMKR*G-EFKDPCE----- 602
A D D++ +E R+ N++ F V DL + EF P
Sbjct: 776 ---AYDPDEIEEEQRERDRKNKINMDFQSFVNRVNDLWSQPQFSGLDLEFDQPLRELGFH 832
Query: 601 -APHEETHFLVLTLDCLVHLSGIPFLVVMLEETEVVNLVRTQSGLEVFNMTFVFKDFGSD 425
PH+ T F+V T CLV L PFLVV L E E+VNL R G + F+MT VFKDF D
Sbjct: 833 GVPHKVTSFIVPTSSCLVELVETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKRD 892
Query: 424 VFHINSIPSKHLFQIKEWLDAGWFKKYYGNEQDVSNWRNRCKT 296
V I+SIPS L IKEWLD KYY + ++ NWR KT
Sbjct: 893 VLRIDSIPSTSLDGIKEWLDTTDI-KYYESRLNL-NWRQILKT 933
Score = 23.1 bits (48), Expect(2) = 1e-29
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 1065 ASTAFKKQHAIRVSIHP-YTVRGHHRKLETVTLQAHANGCRFS 940
A FK + I P +T RG RKL L+AH NG RFS
Sbjct: 668 AGNRFKPIRLTDLWIRPVFTGRG--RKLPGA-LEAHVNGFRFS 707
>ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinus communis]
gi|223548526|gb|EEF50017.1| FACT complex subunit SPT16,
putative [Ricinus communis]
Length = 1098
Score = 129 bits (324), Expect(2) = 3e-29
Identities = 88/224 (39%), Positives = 126/224 (56%), Gaps = 14/224 (6%)
Frame = -3
Query: 925 LMYNNVKHAFFQDGDEKMSPFLHLHLHNPFMLEAEMTKDIQF-----RMVQTFFEGRRRK 761
+MY+N+KHAFFQ D++M LH HLHN M+ + TKD+QF +VQT G+R
Sbjct: 718 VMYSNIKHAFFQPADKEMITLLHFHLHNHIMVGNKKTKDVQFFIEVMDIVQTLGGGKRSA 777
Query: 760 -GPLALDSDKLNKERQDTVDNQLKQKFVWKVI-LYGDLLLR-LNMKR*GEFKDPCE---- 602
P ++ ++ ++R++ ++ Q FV +V ++G R L++ EF P
Sbjct: 778 YDPDEIEEEQRERDRKNKINMDF-QNFVNRVNDVWGQPQFRGLDL----EFDQPLRELGF 832
Query: 601 --APHEETHFLVLTLDCLVHLSGIPFLVVMLEETEVVNLVRTQSGLEVFNMTFVFKDFGS 428
PH+ + F+V T CLV L P +V+ L E E+VNL R G + F+MT VFKDF
Sbjct: 833 HGVPHKASAFIVPTSSCLVELIETPVVVITLSEIEIVNLERIGLGQKNFDMTIVFKDFKR 892
Query: 427 DVFHINSIPSKHLFQIKEWLDAGWFKKYYGNEQDVSNWRNRCKT 296
DV I+SIPS L IKEWL+ KYY + ++ NWR KT
Sbjct: 893 DVLRIDSIPSTSLDSIKEWLNTTDL-KYYESRLNL-NWRPILKT 934
Score = 26.9 bits (58), Expect(2) = 3e-29
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -1
Query: 1065 ASTAFKKQHAIRVSIHPYTVRGHHRKLETVTLQAHANGCRFS 940
AST FK + I P G RKL T +L+AH NG R+S
Sbjct: 669 ASTKFKPIKLYDLWIRP-VFGGRGRKL-TGSLEAHVNGLRYS 708
>ref|XP_003561547.1| PREDICTED: FACT complex subunit SPT16-like [Brachypodium distachyon]
Length = 1082
Score = 128 bits (322), Expect(2) = 4e-29
Identities = 90/223 (40%), Positives = 119/223 (53%), Gaps = 13/223 (5%)
Frame = -3
Query: 925 LMYNNVKHAFFQDGDEKMSPFLHLHLHNPFMLEAEMTKDIQFRM-----VQTFFEGRRRK 761
+MY N+KHAFFQ +++M LH HLHN M+ + TKD+QF + VQT RR
Sbjct: 706 IMYRNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTVGGSRRS- 764
Query: 760 GPLALDSDKLNKE-RQDTVDNQLKQKFVWKVILYGDLLLRLNMKR*G-EFKDPCE----- 602
ALD D++ +E R+ N++ +F V D + K EF P
Sbjct: 765 ---ALDPDEIEEEQRERDRKNRINMEFQNYVNKVNDHWSQPQFKGLDLEFDIPLRELGFH 821
Query: 601 -APHEETHFLVLTLDCLVHLSGIPFLVVMLEETEVVNLVRTQSGLEVFNMTFVFKDFGSD 425
P++ + F++ T CLV L PFLVV L E E+VNL R G + F+M VFKDF D
Sbjct: 822 GVPYKASAFIIPTSTCLVELIETPFLVVTLGEIEIVNLERVGFGTKNFDMAIVFKDFKKD 881
Query: 424 VFHINSIPSKHLFQIKEWLDAGWFKKYYGNEQDVSNWRNRCKT 296
V I+SIPS L IKEWLD KYY + ++ NWR KT
Sbjct: 882 VLRIDSIPSTSLDAIKEWLDTTDL-KYYESRLNL-NWRPILKT 922
Score = 27.3 bits (59), Expect(2) = 4e-29
Identities = 20/42 (47%), Positives = 23/42 (54%)
Frame = -1
Query: 1065 ASTAFKKQHAIRVSIHPYTVRGHHRKLETVTLQAHANGCRFS 940
AST K+ V I P G RKL T TL+AH NG R+S
Sbjct: 657 ASTKTKQMRLNDVWIRP-PFGGRGRKL-TGTLEAHVNGFRYS 696
>ref|XP_003557719.1| PREDICTED: FACT complex subunit SPT16-like [Brachypodium distachyon]
Length = 1059
Score = 128 bits (322), Expect(2) = 4e-29
Identities = 90/223 (40%), Positives = 119/223 (53%), Gaps = 13/223 (5%)
Frame = -3
Query: 925 LMYNNVKHAFFQDGDEKMSPFLHLHLHNPFMLEAEMTKDIQFRM-----VQTFFEGRRRK 761
+MY N+KHAFFQ +++M LH HLHN M+ + TKD+QF + VQT RR
Sbjct: 706 IMYGNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTVGGSRRS- 764
Query: 760 GPLALDSDKLNKE-RQDTVDNQLKQKFVWKVILYGDLLLRLNMKR*G-EFKDPCE----- 602
ALD D++ +E R+ N++ +F V D + K EF P
Sbjct: 765 ---ALDPDEIEEEQRERDRKNRINMEFQNYVNKVNDHWSQPQFKGLDLEFDIPLRELGFH 821
Query: 601 -APHEETHFLVLTLDCLVHLSGIPFLVVMLEETEVVNLVRTQSGLEVFNMTFVFKDFGSD 425
P++ + F++ T CLV L PFLVV L E E+VNL R G + F+M VFKDF D
Sbjct: 822 GVPYKASAFIIPTSTCLVELIETPFLVVTLGEIEIVNLERVGFGTKNFDMAIVFKDFKKD 881
Query: 424 VFHINSIPSKHLFQIKEWLDAGWFKKYYGNEQDVSNWRNRCKT 296
V I+SIPS L IKEWLD KYY + ++ NWR KT
Sbjct: 882 VLRIDSIPSTSLDAIKEWLDTTDL-KYYESRLNL-NWRPILKT 922
Score = 27.3 bits (59), Expect(2) = 4e-29
Identities = 20/42 (47%), Positives = 23/42 (54%)
Frame = -1
Query: 1065 ASTAFKKQHAIRVSIHPYTVRGHHRKLETVTLQAHANGCRFS 940
AST K+ V I P G RKL T TL+AH NG R+S
Sbjct: 657 ASTKTKQMRLNDVWIRP-PFGGRGRKL-TGTLEAHVNGFRYS 696
>ref|XP_002330007.1| global transcription factor group [Populus trichocarpa]
gi|222871432|gb|EEF08563.1| global transcription factor
group [Populus trichocarpa]
Length = 1065
Score = 134 bits (336), Expect(2) = 5e-29
Identities = 91/223 (40%), Positives = 120/223 (53%), Gaps = 13/223 (5%)
Frame = -3
Query: 925 LMYNNVKHAFFQDGDEKMSPFLHLHLHNPFMLEAEMTKDIQFRM-----VQTFFEGRRRK 761
+M+ N+KHAFFQ +++M LH HLHN M+ + TKD+QF + VQT G+R
Sbjct: 717 IMFANIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRS- 775
Query: 760 GPLALDSDKLNKERQDTV-DNQLKQKFVWKVILYGDLLLRLNMKR*G-EFKDPCE----- 602
A D D++ +E+++ N++ F V DL + EF P
Sbjct: 776 ---AYDPDEIEEEQRERERKNKINMDFQSFVNRVNDLWAQPQFSGLDLEFDQPLRELGFH 832
Query: 601 -APHEETHFLVLTLDCLVHLSGIPFLVVMLEETEVVNLVRTQSGLEVFNMTFVFKDFGSD 425
PH+ T F+V T CLV L PFLVV L E E+VNL R G + F+MT VFKDF D
Sbjct: 833 GVPHKVTSFIVPTSSCLVELVETPFLVVTLSEIEIVNLERVGLGQKNFDMTIVFKDFKRD 892
Query: 424 VFHINSIPSKHLFQIKEWLDAGWFKKYYGNEQDVSNWRNRCKT 296
V I+SIPS L IKEWLD KYY + ++ NWR KT
Sbjct: 893 VLRIDSIPSTALDGIKEWLDTTDI-KYYESRLNL-NWRQILKT 933
Score = 21.6 bits (44), Expect(2) = 5e-29
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 1002 GHHRKLETVTLQAHANGCRFS 940
G RKL +L+AH NG R+S
Sbjct: 688 GRGRKLPG-SLEAHVNGFRYS 707