BLASTX nr result

ID: Papaver23_contig00011812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00011812
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267898.2| PREDICTED: uncharacterized protein LOC100265...   103   3e-20
emb|CBI41050.3| unnamed protein product [Vitis vinifera]              103   3e-20
ref|XP_004170159.1| PREDICTED: mediator of RNA polymerase II tra...    97   2e-18
ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II tra...    97   2e-18
ref|XP_003574131.1| PREDICTED: uncharacterized protein LOC100836...    97   2e-18

>ref|XP_002267898.2| PREDICTED: uncharacterized protein LOC100265327, partial [Vitis
           vinifera]
          Length = 785

 Score =  103 bits (256), Expect = 3e-20
 Identities = 49/75 (65%), Positives = 56/75 (74%)
 Frame = -3

Query: 571 RRNMFGGSWSDTDDLGHADETPKLRNSSDLFESNLSDDYDMLSETQSLWPRKRRLSERDA 392
           RRNMFGG WSD +D+G  D+TPKL   +D  ESN  ++ D     + LWPRKRRLSERDA
Sbjct: 641 RRNMFGGPWSDPEDMGSVDDTPKLSTYADPLESNSFENNDTYYGARGLWPRKRRLSERDA 700

Query: 391 AFGLKTSVGLGAYLG 347
           AFGL TSVGLGAYLG
Sbjct: 701 AFGLNTSVGLGAYLG 715



 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 35/44 (79%), Positives = 37/44 (84%)
 Frame = -2

Query: 194 TSAFAPAGGASNQPNSSQNEREAWWISRWSYGCPMCGGTWVRVV 63
           TSAFA    A+NQPN  QNERE WWISRW+YGCPMCGGTWVRVV
Sbjct: 746 TSAFA--ADATNQPN--QNEREMWWISRWAYGCPMCGGTWVRVV 785


>emb|CBI41050.3| unnamed protein product [Vitis vinifera]
          Length = 792

 Score =  103 bits (256), Expect = 3e-20
 Identities = 49/75 (65%), Positives = 56/75 (74%)
 Frame = -3

Query: 571 RRNMFGGSWSDTDDLGHADETPKLRNSSDLFESNLSDDYDMLSETQSLWPRKRRLSERDA 392
           RRNMFGG WSD +D+G  D+TPKL   +D  ESN  ++ D     + LWPRKRRLSERDA
Sbjct: 648 RRNMFGGPWSDPEDMGSVDDTPKLSTYADPLESNSFENNDTYYGARGLWPRKRRLSERDA 707

Query: 391 AFGLKTSVGLGAYLG 347
           AFGL TSVGLGAYLG
Sbjct: 708 AFGLNTSVGLGAYLG 722



 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 35/44 (79%), Positives = 37/44 (84%)
 Frame = -2

Query: 194 TSAFAPAGGASNQPNSSQNEREAWWISRWSYGCPMCGGTWVRVV 63
           TSAFA    A+NQPN  QNERE WWISRW+YGCPMCGGTWVRVV
Sbjct: 753 TSAFA--ADATNQPN--QNEREMWWISRWAYGCPMCGGTWVRVV 792


>ref|XP_004170159.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            16-like [Cucumis sativus]
          Length = 1143

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 45/75 (60%), Positives = 55/75 (73%)
 Frame = -3

Query: 571  RRNMFGGSWSDTDDLGHADETPKLRNSSDLFESNLSDDYDMLSETQSLWPRKRRLSERDA 392
            RRNM+GG WSD DDLG  D+  KL NSSD  + N  ++ ++      LWPRKRR+SERDA
Sbjct: 998  RRNMYGGPWSDVDDLGPNDDNSKLSNSSDPLDLNSLENCNVYYGANGLWPRKRRMSERDA 1057

Query: 391  AFGLKTSVGLGAYLG 347
            AFGL TS+GLGA+LG
Sbjct: 1058 AFGLNTSIGLGAFLG 1072



 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 31/44 (70%), Positives = 36/44 (81%)
 Frame = -2

Query: 194  TSAFAPAGGASNQPNSSQNEREAWWISRWSYGCPMCGGTWVRVV 63
            TSAFA  G  ++   ++QNERE WWISRW+YGCPMCGGTWVRVV
Sbjct: 1103 TSAFASPGATND---TTQNERETWWISRWAYGCPMCGGTWVRVV 1143


>ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            16-like [Cucumis sativus]
          Length = 1220

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 45/75 (60%), Positives = 55/75 (73%)
 Frame = -3

Query: 571  RRNMFGGSWSDTDDLGHADETPKLRNSSDLFESNLSDDYDMLSETQSLWPRKRRLSERDA 392
            RRNM+GG WSD DDLG  D+  KL NSSD  + N  ++ ++      LWPRKRR+SERDA
Sbjct: 1075 RRNMYGGPWSDVDDLGPNDDNSKLSNSSDPLDLNSLENCNVYYGANGLWPRKRRMSERDA 1134

Query: 391  AFGLKTSVGLGAYLG 347
            AFGL TS+GLGA+LG
Sbjct: 1135 AFGLNTSIGLGAFLG 1149



 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 31/44 (70%), Positives = 36/44 (81%)
 Frame = -2

Query: 194  TSAFAPAGGASNQPNSSQNEREAWWISRWSYGCPMCGGTWVRVV 63
            TSAFA  G  ++   ++QNERE WWISRW+YGCPMCGGTWVRVV
Sbjct: 1180 TSAFASPGATND---TTQNERETWWISRWAYGCPMCGGTWVRVV 1220


>ref|XP_003574131.1| PREDICTED: uncharacterized protein LOC100836267 [Brachypodium
            distachyon]
          Length = 1305

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 49/77 (63%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
 Frame = -3

Query: 571  RRNMFGGSWSDTDDLGHADETPKLRNSSDLFE--SNLSDDYDMLSETQSLWPRKRRLSER 398
            RRNMFGG WS+ DDLG  D  P+L+  + +    SN+ +D D     QSLWP+KRRLSER
Sbjct: 1160 RRNMFGGPWSEPDDLGPLDNMPQLKIGACINPHLSNMEEDGDSNEGIQSLWPKKRRLSER 1219

Query: 397  DAAFGLKTSVGLGAYLG 347
            DAAFGLKTSVGLGAYLG
Sbjct: 1220 DAAFGLKTSVGLGAYLG 1236



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 27/44 (61%), Positives = 33/44 (75%)
 Frame = -2

Query: 194  TSAFAPAGGASNQPNSSQNEREAWWISRWSYGCPMCGGTWVRVV 63
            T AFA  G     PN + NERE+WWISRW++ CPMCGG+WV+VV
Sbjct: 1267 TCAFAQPG----VPNPA-NERESWWISRWTHACPMCGGSWVKVV 1305


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