BLASTX nr result
ID: Papaver23_contig00011812
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver23_contig00011812 (573 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267898.2| PREDICTED: uncharacterized protein LOC100265... 103 3e-20 emb|CBI41050.3| unnamed protein product [Vitis vinifera] 103 3e-20 ref|XP_004170159.1| PREDICTED: mediator of RNA polymerase II tra... 97 2e-18 ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II tra... 97 2e-18 ref|XP_003574131.1| PREDICTED: uncharacterized protein LOC100836... 97 2e-18 >ref|XP_002267898.2| PREDICTED: uncharacterized protein LOC100265327, partial [Vitis vinifera] Length = 785 Score = 103 bits (256), Expect = 3e-20 Identities = 49/75 (65%), Positives = 56/75 (74%) Frame = -3 Query: 571 RRNMFGGSWSDTDDLGHADETPKLRNSSDLFESNLSDDYDMLSETQSLWPRKRRLSERDA 392 RRNMFGG WSD +D+G D+TPKL +D ESN ++ D + LWPRKRRLSERDA Sbjct: 641 RRNMFGGPWSDPEDMGSVDDTPKLSTYADPLESNSFENNDTYYGARGLWPRKRRLSERDA 700 Query: 391 AFGLKTSVGLGAYLG 347 AFGL TSVGLGAYLG Sbjct: 701 AFGLNTSVGLGAYLG 715 Score = 75.9 bits (185), Expect = 4e-12 Identities = 35/44 (79%), Positives = 37/44 (84%) Frame = -2 Query: 194 TSAFAPAGGASNQPNSSQNEREAWWISRWSYGCPMCGGTWVRVV 63 TSAFA A+NQPN QNERE WWISRW+YGCPMCGGTWVRVV Sbjct: 746 TSAFA--ADATNQPN--QNEREMWWISRWAYGCPMCGGTWVRVV 785 >emb|CBI41050.3| unnamed protein product [Vitis vinifera] Length = 792 Score = 103 bits (256), Expect = 3e-20 Identities = 49/75 (65%), Positives = 56/75 (74%) Frame = -3 Query: 571 RRNMFGGSWSDTDDLGHADETPKLRNSSDLFESNLSDDYDMLSETQSLWPRKRRLSERDA 392 RRNMFGG WSD +D+G D+TPKL +D ESN ++ D + LWPRKRRLSERDA Sbjct: 648 RRNMFGGPWSDPEDMGSVDDTPKLSTYADPLESNSFENNDTYYGARGLWPRKRRLSERDA 707 Query: 391 AFGLKTSVGLGAYLG 347 AFGL TSVGLGAYLG Sbjct: 708 AFGLNTSVGLGAYLG 722 Score = 75.9 bits (185), Expect = 4e-12 Identities = 35/44 (79%), Positives = 37/44 (84%) Frame = -2 Query: 194 TSAFAPAGGASNQPNSSQNEREAWWISRWSYGCPMCGGTWVRVV 63 TSAFA A+NQPN QNERE WWISRW+YGCPMCGGTWVRVV Sbjct: 753 TSAFA--ADATNQPN--QNEREMWWISRWAYGCPMCGGTWVRVV 792 >ref|XP_004170159.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16-like [Cucumis sativus] Length = 1143 Score = 96.7 bits (239), Expect = 2e-18 Identities = 45/75 (60%), Positives = 55/75 (73%) Frame = -3 Query: 571 RRNMFGGSWSDTDDLGHADETPKLRNSSDLFESNLSDDYDMLSETQSLWPRKRRLSERDA 392 RRNM+GG WSD DDLG D+ KL NSSD + N ++ ++ LWPRKRR+SERDA Sbjct: 998 RRNMYGGPWSDVDDLGPNDDNSKLSNSSDPLDLNSLENCNVYYGANGLWPRKRRMSERDA 1057 Query: 391 AFGLKTSVGLGAYLG 347 AFGL TS+GLGA+LG Sbjct: 1058 AFGLNTSIGLGAFLG 1072 Score = 73.2 bits (178), Expect = 3e-11 Identities = 31/44 (70%), Positives = 36/44 (81%) Frame = -2 Query: 194 TSAFAPAGGASNQPNSSQNEREAWWISRWSYGCPMCGGTWVRVV 63 TSAFA G ++ ++QNERE WWISRW+YGCPMCGGTWVRVV Sbjct: 1103 TSAFASPGATND---TTQNERETWWISRWAYGCPMCGGTWVRVV 1143 >ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16-like [Cucumis sativus] Length = 1220 Score = 96.7 bits (239), Expect = 2e-18 Identities = 45/75 (60%), Positives = 55/75 (73%) Frame = -3 Query: 571 RRNMFGGSWSDTDDLGHADETPKLRNSSDLFESNLSDDYDMLSETQSLWPRKRRLSERDA 392 RRNM+GG WSD DDLG D+ KL NSSD + N ++ ++ LWPRKRR+SERDA Sbjct: 1075 RRNMYGGPWSDVDDLGPNDDNSKLSNSSDPLDLNSLENCNVYYGANGLWPRKRRMSERDA 1134 Query: 391 AFGLKTSVGLGAYLG 347 AFGL TS+GLGA+LG Sbjct: 1135 AFGLNTSIGLGAFLG 1149 Score = 73.2 bits (178), Expect = 3e-11 Identities = 31/44 (70%), Positives = 36/44 (81%) Frame = -2 Query: 194 TSAFAPAGGASNQPNSSQNEREAWWISRWSYGCPMCGGTWVRVV 63 TSAFA G ++ ++QNERE WWISRW+YGCPMCGGTWVRVV Sbjct: 1180 TSAFASPGATND---TTQNERETWWISRWAYGCPMCGGTWVRVV 1220 >ref|XP_003574131.1| PREDICTED: uncharacterized protein LOC100836267 [Brachypodium distachyon] Length = 1305 Score = 96.7 bits (239), Expect = 2e-18 Identities = 49/77 (63%), Positives = 57/77 (74%), Gaps = 2/77 (2%) Frame = -3 Query: 571 RRNMFGGSWSDTDDLGHADETPKLRNSSDLFE--SNLSDDYDMLSETQSLWPRKRRLSER 398 RRNMFGG WS+ DDLG D P+L+ + + SN+ +D D QSLWP+KRRLSER Sbjct: 1160 RRNMFGGPWSEPDDLGPLDNMPQLKIGACINPHLSNMEEDGDSNEGIQSLWPKKRRLSER 1219 Query: 397 DAAFGLKTSVGLGAYLG 347 DAAFGLKTSVGLGAYLG Sbjct: 1220 DAAFGLKTSVGLGAYLG 1236 Score = 60.5 bits (145), Expect = 2e-07 Identities = 27/44 (61%), Positives = 33/44 (75%) Frame = -2 Query: 194 TSAFAPAGGASNQPNSSQNEREAWWISRWSYGCPMCGGTWVRVV 63 T AFA G PN + NERE+WWISRW++ CPMCGG+WV+VV Sbjct: 1267 TCAFAQPG----VPNPA-NERESWWISRWTHACPMCGGSWVKVV 1305