BLASTX nr result

ID: Papaver23_contig00011678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00011678
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156228.1| PREDICTED: tryptophan synthase beta chain 2-...   184   5e-45
ref|XP_004141605.1| PREDICTED: tryptophan synthase beta chain 2-...   184   5e-45
ref|XP_002531484.1| tryptophan synthase beta chain, putative [Ri...   182   2e-44
ref|XP_002279124.2| PREDICTED: tryptophan synthase beta chain 2 ...   179   2e-43
emb|CBI16881.3| unnamed protein product [Vitis vinifera]              179   2e-43

>ref|XP_004156228.1| PREDICTED: tryptophan synthase beta chain 2-like [Cucumis sativus]
          Length = 482

 Score =  184 bits (468), Expect = 5e-45
 Identities = 88/135 (65%), Positives = 108/135 (80%)
 Frame = -1

Query: 406 VSGNKILNQLKLSPDYNNRAATAGSIMCSATNKPTEIPRQWYNIVADLPVKPPPALNPET 227
           +S  ++   L+ S  Y  +AA+  ++      K  E+PRQWYN+VADLPVKPPP L+P+T
Sbjct: 13  LSLKRVPAHLRFSNGYRTKAASNPNL------KAVEVPRQWYNLVADLPVKPPPPLHPKT 66

Query: 226 LQPVKPEELSHLFPDELLKQDNSTERFIDIPQEVLDIYSLWRTTPLIRAKRLEKLLGTPA 47
            +P+KPE+LSHLFPDEL+KQ+ STER+I+IP EV+DIY LWR TPLIRAKRLEKLL TPA
Sbjct: 67  YEPIKPEDLSHLFPDELIKQEASTERYINIPDEVVDIYGLWRPTPLIRAKRLEKLLDTPA 126

Query: 46  RIYYKYEGVSPAGSH 2
           RIYYKYEGVSPAGSH
Sbjct: 127 RIYYKYEGVSPAGSH 141


>ref|XP_004141605.1| PREDICTED: tryptophan synthase beta chain 2-like [Cucumis sativus]
          Length = 482

 Score =  184 bits (468), Expect = 5e-45
 Identities = 88/135 (65%), Positives = 108/135 (80%)
 Frame = -1

Query: 406 VSGNKILNQLKLSPDYNNRAATAGSIMCSATNKPTEIPRQWYNIVADLPVKPPPALNPET 227
           +S  ++   L+ S  Y  +AA+  ++      K  E+PRQWYN+VADLPVKPPP L+P+T
Sbjct: 13  LSLKRVPAHLRFSNGYRTKAASNPNL------KSVEVPRQWYNLVADLPVKPPPPLHPKT 66

Query: 226 LQPVKPEELSHLFPDELLKQDNSTERFIDIPQEVLDIYSLWRTTPLIRAKRLEKLLGTPA 47
            +P+KPE+LSHLFPDEL+KQ+ STER+I+IP EV+DIY LWR TPLIRAKRLEKLL TPA
Sbjct: 67  YEPIKPEDLSHLFPDELIKQEASTERYINIPDEVVDIYGLWRPTPLIRAKRLEKLLDTPA 126

Query: 46  RIYYKYEGVSPAGSH 2
           RIYYKYEGVSPAGSH
Sbjct: 127 RIYYKYEGVSPAGSH 141


>ref|XP_002531484.1| tryptophan synthase beta chain, putative [Ricinus communis]
           gi|223528911|gb|EEF30908.1| tryptophan synthase beta
           chain, putative [Ricinus communis]
          Length = 212

 Score =  182 bits (462), Expect = 2e-44
 Identities = 87/133 (65%), Positives = 102/133 (76%)
 Frame = -1

Query: 400 GNKILNQLKLSPDYNNRAATAGSIMCSATNKPTEIPRQWYNIVADLPVKPPPALNPETLQ 221
           G   LN       ++N          +A  K  +IPRQWYN+V+DLPVKPPPALNP+T +
Sbjct: 30  GGFALNTKSSPSKFSNGLRARAKASLNADQKAIQIPRQWYNLVSDLPVKPPPALNPKTHE 89

Query: 220 PVKPEELSHLFPDELLKQDNSTERFIDIPQEVLDIYSLWRTTPLIRAKRLEKLLGTPARI 41
           PVKPE+L+ LFPDEL+KQ+ S E+FIDIP+EVLDIY LWR TPLIRAKRLEKLL TPA+I
Sbjct: 90  PVKPEDLAPLFPDELIKQEASNEKFIDIPEEVLDIYELWRPTPLIRAKRLEKLLDTPAKI 149

Query: 40  YYKYEGVSPAGSH 2
           YYKYEGVSPAGSH
Sbjct: 150 YYKYEGVSPAGSH 162


>ref|XP_002279124.2| PREDICTED: tryptophan synthase beta chain 2 [Vitis vinifera]
          Length = 483

 Score =  179 bits (455), Expect = 2e-43
 Identities = 87/126 (69%), Positives = 102/126 (80%)
 Frame = -1

Query: 379 LKLSPDYNNRAATAGSIMCSATNKPTEIPRQWYNIVADLPVKPPPALNPETLQPVKPEEL 200
           L+ SP    RA  A S    A  +  EIP QWYN++ADLPVKPPPAL+P+T +P+KPE+L
Sbjct: 19  LRASPRCRVRARAASS---KAGPQAVEIPHQWYNLIADLPVKPPPALHPQTQEPIKPEDL 75

Query: 199 SHLFPDELLKQDNSTERFIDIPQEVLDIYSLWRTTPLIRAKRLEKLLGTPARIYYKYEGV 20
           S LFPDEL+KQ+ ST+RFI IP+EV+D+Y LWR TPLIRAKRLEKLL TPARIYYKYEGV
Sbjct: 76  SPLFPDELIKQEASTDRFIAIPEEVIDVYRLWRPTPLIRAKRLEKLLDTPARIYYKYEGV 135

Query: 19  SPAGSH 2
           SPAGSH
Sbjct: 136 SPAGSH 141


>emb|CBI16881.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  179 bits (455), Expect = 2e-43
 Identities = 87/126 (69%), Positives = 102/126 (80%)
 Frame = -1

Query: 379 LKLSPDYNNRAATAGSIMCSATNKPTEIPRQWYNIVADLPVKPPPALNPETLQPVKPEEL 200
           L+ SP    RA  A S    A  +  EIP QWYN++ADLPVKPPPAL+P+T +P+KPE+L
Sbjct: 31  LRASPRCRVRARAASS---KAGPQAVEIPHQWYNLIADLPVKPPPALHPQTQEPIKPEDL 87

Query: 199 SHLFPDELLKQDNSTERFIDIPQEVLDIYSLWRTTPLIRAKRLEKLLGTPARIYYKYEGV 20
           S LFPDEL+KQ+ ST+RFI IP+EV+D+Y LWR TPLIRAKRLEKLL TPARIYYKYEGV
Sbjct: 88  SPLFPDELIKQEASTDRFIAIPEEVIDVYRLWRPTPLIRAKRLEKLLDTPARIYYKYEGV 147

Query: 19  SPAGSH 2
           SPAGSH
Sbjct: 148 SPAGSH 153


Top