BLASTX nr result

ID: Papaver23_contig00011659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00011659
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN25415.1| unknown [Zea mays] gi|414872103|tpg|DAA50660.1| T...    56   1e-11
gb|ACG35389.1| rhomboid family protein [Zea mays]                      56   1e-11
gb|ACN33491.1| unknown [Zea mays] gi|414872104|tpg|DAA50661.1| T...    56   1e-11
ref|XP_002464152.1| hypothetical protein SORBIDRAFT_01g013170 [S...    56   2e-11
tpg|DAA50658.1| TPA: hypothetical protein ZEAMMB73_465757 [Zea m...    56   2e-10

>gb|ACN25415.1| unknown [Zea mays] gi|414872103|tpg|DAA50660.1| TPA: rhomboid
           family protein [Zea mays]
          Length = 396

 Score = 55.8 bits (133), Expect(2) = 1e-11
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = -1

Query: 209 VAMGFEKTQAEVALTAAEGNPSVAVEILMTQQG 111
           V MGFEKTQAEVAL AA+G+P+VA+EILM+QQG
Sbjct: 364 VGMGFEKTQAEVALAAADGDPNVAIEILMSQQG 396



 Score = 38.1 bits (87), Expect(2) = 1e-11
 Identities = 21/42 (50%), Positives = 30/42 (71%), Gaps = 4/42 (9%)
 Frame = -2

Query: 400 LSNTRHLALD----NATAVGQPLNSGAFDEELKKLVAMGFEK 287
           L+NT+H A++    +AT   + +++  FDEELKKLV MGFEK
Sbjct: 331 LTNTQHTAVNTVRADATVTAEQVDT--FDEELKKLVGMGFEK 370


>gb|ACG35389.1| rhomboid family protein [Zea mays]
          Length = 396

 Score = 55.8 bits (133), Expect(2) = 1e-11
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = -1

Query: 209 VAMGFEKTQAEVALTAAEGNPSVAVEILMTQQG 111
           V MGFEKTQAEVAL AA+G+P+VA+EILM+QQG
Sbjct: 364 VGMGFEKTQAEVALAAADGDPNVAIEILMSQQG 396



 Score = 38.1 bits (87), Expect(2) = 1e-11
 Identities = 21/42 (50%), Positives = 30/42 (71%), Gaps = 4/42 (9%)
 Frame = -2

Query: 400 LSNTRHLALD----NATAVGQPLNSGAFDEELKKLVAMGFEK 287
           L+NT+H A++    +AT   + +++  FDEELKKLV MGFEK
Sbjct: 331 LTNTQHTAVNTVRADATVTAEQVDT--FDEELKKLVGMGFEK 370


>gb|ACN33491.1| unknown [Zea mays] gi|414872104|tpg|DAA50661.1| TPA: hypothetical
           protein ZEAMMB73_465757 [Zea mays]
          Length = 195

 Score = 55.8 bits (133), Expect(2) = 1e-11
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = -1

Query: 209 VAMGFEKTQAEVALTAAEGNPSVAVEILMTQQG 111
           V MGFEKTQAEVAL AA+G+P+VA+EILM+QQG
Sbjct: 163 VGMGFEKTQAEVALAAADGDPNVAIEILMSQQG 195



 Score = 38.1 bits (87), Expect(2) = 1e-11
 Identities = 21/42 (50%), Positives = 30/42 (71%), Gaps = 4/42 (9%)
 Frame = -2

Query: 400 LSNTRHLALD----NATAVGQPLNSGAFDEELKKLVAMGFEK 287
           L+NT+H A++    +AT   + +++  FDEELKKLV MGFEK
Sbjct: 130 LTNTQHTAVNTVRADATVTAEQVDT--FDEELKKLVGMGFEK 169


>ref|XP_002464152.1| hypothetical protein SORBIDRAFT_01g013170 [Sorghum bicolor]
           gi|241918006|gb|EER91150.1| hypothetical protein
           SORBIDRAFT_01g013170 [Sorghum bicolor]
          Length = 396

 Score = 55.8 bits (133), Expect(2) = 2e-11
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = -1

Query: 209 VAMGFEKTQAEVALTAAEGNPSVAVEILMTQQG 111
           V MGFEKTQAEVAL AA+G+P+VA+EILM+QQG
Sbjct: 364 VGMGFEKTQAEVALAAADGDPNVAIEILMSQQG 396



 Score = 37.7 bits (86), Expect(2) = 2e-11
 Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 4/42 (9%)
 Frame = -2

Query: 400 LSNTRHLALDN----ATAVGQPLNSGAFDEELKKLVAMGFEK 287
           L+NT+H A++     AT   + +++  FDEELKKLV MGFEK
Sbjct: 331 LTNTQHTAVNTVRAAATVAAEQVDT--FDEELKKLVGMGFEK 370


>tpg|DAA50658.1| TPA: hypothetical protein ZEAMMB73_465757 [Zea mays]
          Length = 381

 Score = 55.8 bits (133), Expect(2) = 2e-10
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = -1

Query: 209 VAMGFEKTQAEVALTAAEGNPSVAVEILMTQQG 111
           V MGFEKTQAEVAL AA+G+P+VA+EILM+QQG
Sbjct: 349 VGMGFEKTQAEVALAAADGDPNVAIEILMSQQG 381



 Score = 33.9 bits (76), Expect(2) = 2e-10
 Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 4/40 (10%)
 Frame = -2

Query: 394 NTRHLALD----NATAVGQPLNSGAFDEELKKLVAMGFEK 287
           + RH A++    +AT   + +++  FDEELKKLV MGFEK
Sbjct: 318 HARHTAVNTVRADATVTAEQVDT--FDEELKKLVGMGFEK 355


Top