BLASTX nr result

ID: Papaver23_contig00011439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00011439
         (1466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG52193.1|AC012329_20 putative GTPase activator protein of R...    48   2e-08
ref|NP_190504.2| RabGAP/TBC domain-containing protein [Arabidops...    48   2e-08
ref|XP_002877668.1| rab GTPase activator [Arabidopsis lyrata sub...    48   2e-08
ref|XP_002518219.1| conserved hypothetical protein [Ricinus comm...    47   5e-08
ref|XP_003544717.1| PREDICTED: GTPase-activating protein gyp7-li...    49   8e-08

>gb|AAG52193.1|AC012329_20 putative GTPase activator protein of Rab-like small GTPases;
            20638-18455 [Arabidopsis thaliana]
            gi|6723405|emb|CAB66414.1| GTPase activating-like protein
            [Arabidopsis thaliana]
          Length = 554

 Score = 48.1 bits (113), Expect(3) = 2e-08
 Identities = 24/43 (55%), Positives = 31/43 (72%), Gaps = 3/43 (6%)
 Frame = +1

Query: 1138 LFFCFVGFVK---NNFRLDGVGFRRRLNTVGKISKFKDPPMLK 1257
            +F+CFVGF+K   +NFRLD VG RR+LN V KI K KD  + +
Sbjct: 384  VFWCFVGFMKKARHNFRLDEVGIRRQLNIVSKIIKSKDSQLYR 426



 Score = 32.7 bits (73), Expect(3) = 2e-08
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +2

Query: 1274 IEQAMCIWGVMWSADQAATRARM 1342
            ++Q +C+W VMW ADQAA RA M
Sbjct: 453  LDQTLCLWEVMW-ADQAAIRAGM 474



 Score = 24.6 bits (52), Expect(3) = 2e-08
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 9/38 (23%)
 Frame = +3

Query: 1020 NHLEP------AGCIVVMQ*W**---DVGYCPGVSDFL 1106
            NHLEP      A  + V++ +     D+GYC G+SD L
Sbjct: 334  NHLEPYKIFQAARLVAVLEAYALYDPDIGYCQGMSDLL 371


>ref|NP_190504.2| RabGAP/TBC domain-containing protein [Arabidopsis thaliana]
            gi|66792662|gb|AAY56433.1| At3g49350 [Arabidopsis
            thaliana] gi|110738525|dbj|BAF01188.1| GTPase activating
            -like protein [Arabidopsis thaliana]
            gi|332645010|gb|AEE78531.1| RabGAP/TBC domain-containing
            protein [Arabidopsis thaliana]
          Length = 539

 Score = 48.1 bits (113), Expect(3) = 2e-08
 Identities = 24/43 (55%), Positives = 31/43 (72%), Gaps = 3/43 (6%)
 Frame = +1

Query: 1138 LFFCFVGFVK---NNFRLDGVGFRRRLNTVGKISKFKDPPMLK 1257
            +F+CFVGF+K   +NFRLD VG RR+LN V KI K KD  + +
Sbjct: 369  VFWCFVGFMKKARHNFRLDEVGIRRQLNIVSKIIKSKDSQLYR 411



 Score = 32.7 bits (73), Expect(3) = 2e-08
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +2

Query: 1274 IEQAMCIWGVMWSADQAATRARM 1342
            ++Q +C+W VMW ADQAA RA M
Sbjct: 438  LDQTLCLWEVMW-ADQAAIRAGM 459



 Score = 24.6 bits (52), Expect(3) = 2e-08
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 9/38 (23%)
 Frame = +3

Query: 1020 NHLEP------AGCIVVMQ*W**---DVGYCPGVSDFL 1106
            NHLEP      A  + V++ +     D+GYC G+SD L
Sbjct: 319  NHLEPYKIFQAARLVAVLEAYALYDPDIGYCQGMSDLL 356


>ref|XP_002877668.1| rab GTPase activator [Arabidopsis lyrata subsp. lyrata]
            gi|297323506|gb|EFH53927.1| rab GTPase activator
            [Arabidopsis lyrata subsp. lyrata]
          Length = 538

 Score = 48.1 bits (113), Expect(3) = 2e-08
 Identities = 24/43 (55%), Positives = 31/43 (72%), Gaps = 3/43 (6%)
 Frame = +1

Query: 1138 LFFCFVGFVK---NNFRLDGVGFRRRLNTVGKISKFKDPPMLK 1257
            +F+CFVGF+K   +NFRLD VG RR+LN V KI K KD  + +
Sbjct: 368  VFWCFVGFMKKARHNFRLDEVGIRRQLNIVSKIIKSKDSQLYR 410



 Score = 32.7 bits (73), Expect(3) = 2e-08
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +2

Query: 1274 IEQAMCIWGVMWSADQAATRARM 1342
            ++Q +C+W VMW ADQAA RA M
Sbjct: 437  LDQTLCLWEVMW-ADQAAIRAGM 458



 Score = 24.6 bits (52), Expect(3) = 2e-08
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 9/38 (23%)
 Frame = +3

Query: 1020 NHLEP------AGCIVVMQ*W**---DVGYCPGVSDFL 1106
            NHLEP      A  + V++ +     D+GYC G+SD L
Sbjct: 318  NHLEPYKIFQAARLVAVLEAYALYDPDIGYCQGMSDLL 355


>ref|XP_002518219.1| conserved hypothetical protein [Ricinus communis]
            gi|223542624|gb|EEF44162.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 544

 Score = 47.4 bits (111), Expect(3) = 5e-08
 Identities = 24/37 (64%), Positives = 28/37 (75%), Gaps = 3/37 (8%)
 Frame = +1

Query: 1141 FFCFVGFVK---NNFRLDGVGFRRRLNTVGKISKFKD 1242
            F+CFVGF+K   +NFRLD VG RR+LN V KI K KD
Sbjct: 376  FWCFVGFMKKARHNFRLDEVGIRRQLNIVSKIIKCKD 412



 Score = 33.9 bits (76), Expect(3) = 5e-08
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = +2

Query: 1277 EQAMCIWGVMWSADQAATRARM 1342
            EQ +C+W VMW ADQAA RAR+
Sbjct: 445  EQTICLWEVMW-ADQAAIRARI 465



 Score = 22.7 bits (47), Expect(3) = 5e-08
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 1071 DVGYCPGVSDFL 1106
            ++GYC G+SD L
Sbjct: 351  EIGYCQGMSDLL 362


>ref|XP_003544717.1| PREDICTED: GTPase-activating protein gyp7-like [Glycine max]
          Length = 558

 Score = 48.5 bits (114), Expect(3) = 8e-08
 Identities = 24/42 (57%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
 Frame = +1

Query: 1141 FFCFVGFVKN---NFRLDGVGFRRRLNTVGKISKFKDPPMLK 1257
            F+CFVGF+K    NFRLD VG RR+L+ V KI KFKD  + +
Sbjct: 389  FWCFVGFMKKARQNFRLDEVGIRRQLDIVAKIIKFKDAHLFR 430



 Score = 32.0 bits (71), Expect(3) = 8e-08
 Identities = 14/20 (70%), Positives = 16/20 (80%)
 Frame = +2

Query: 1277 EQAMCIWGVMWSADQAATRA 1336
            EQ +C+W VMW ADQAA RA
Sbjct: 458  EQTLCLWEVMW-ADQAAIRA 476



 Score = 22.7 bits (47), Expect(3) = 8e-08
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 1071 DVGYCPGVSDFL 1106
            ++GYC G+SD L
Sbjct: 364  EIGYCQGMSDLL 375


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