BLASTX nr result
ID: Papaver23_contig00011244
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00011244
(641 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ... 324 1e-86
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [... 316 2e-84
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor rpoD-... 313 2e-83
ref|XP_002333134.1| predicted protein [Populus trichocarpa] gi|2... 309 3e-82
ref|XP_002331841.1| predicted protein [Populus trichocarpa] gi|2... 309 3e-82
>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
gi|302143685|emb|CBI22546.3| unnamed protein product
[Vitis vinifera]
Length = 518
Score = 324 bits (830), Expect = 1e-86
Identities = 166/216 (76%), Positives = 182/216 (84%), Gaps = 3/216 (1%)
Frame = -1
Query: 641 FAINKYFQEFANGPKFQDLCQAGAKGLIVAIDRFEPKRKSQLSTYGLFWIRHAIMRSMTL 462
F INKYFQEFANGPKFQDLCQAG KGLI AIDRFEPKR +LSTYGLFWIRHAIMRSMTL
Sbjct: 294 FVINKYFQEFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIMRSMTL 353
Query: 461 SSFTRVSYGLESVRVEIQKTKLQLMFELNRIPKEEEIAEKMGISLERYHEVMRASQGVIS 282
SSFTRVS+GLESVRVEIQ+ KL+L+F+L R+P EEEI EK+GIS ERYHEVMRAS+ V+S
Sbjct: 354 SSFTRVSFGLESVRVEIQRAKLELLFKLQRLPTEEEIIEKVGISPERYHEVMRASKSVLS 413
Query: 281 LHARHNTTQEEFINAITDFD---GDKRSQPXXXXXXXXXXXXXLKPKENLVIRQRYGLDG 111
LHARH TTQEE+IN ITD + GD+ Q LKPKE+LV+RQRYGLDG
Sbjct: 414 LHARHATTQEEYINGITDVEGVGGDRGRQLALLRLALDDVLDSLKPKESLVMRQRYGLDG 473
Query: 110 KGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTR 3
KGDRTLGEIAGNL+ISREMVRKHEVKALMKLKHP R
Sbjct: 474 KGDRTLGEIAGNLSISREMVRKHEVKALMKLKHPAR 509
>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 501
Score = 316 bits (810), Expect = 2e-84
Identities = 160/214 (74%), Positives = 178/214 (83%), Gaps = 1/214 (0%)
Frame = -1
Query: 641 FAINKYFQEFANGPKFQDLCQAGAKGLIVAIDRFEPKRKSQLSTYGLFWIRHAIMRSMTL 462
F +NKYFQ+FANGP+FQDLCQAG KGLI AIDRFEP+R+ QLSTY LFWIRHAI+RSMTL
Sbjct: 279 FVMNKYFQDFANGPRFQDLCQAGVKGLITAIDRFEPQRRFQLSTYSLFWIRHAIIRSMTL 338
Query: 461 SSFTRVSYGLESVRVEIQKTKLQLMFELNRIPKEEEIAEKMGISLERYHEVMRASQGVIS 282
SSFT+VS+GLESVR EIQK KL+L+ EL R P EEEI E++GIS ERYHEV+RA++ +S
Sbjct: 339 SSFTKVSFGLESVRTEIQKAKLELLIELQRRPTEEEIIERVGISAERYHEVIRAAKPALS 398
Query: 281 LHARHNTTQEEFINAITDFD-GDKRSQPXXXXXXXXXXXXXLKPKENLVIRQRYGLDGKG 105
LHARH TQEEFIN ITD D GD R QP LKPKE+LVIRQRYGLDGKG
Sbjct: 399 LHARHAVTQEEFINGITDIDGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKG 458
Query: 104 DRTLGEIAGNLNISREMVRKHEVKALMKLKHPTR 3
DRTLGEIAGNLNISREMVRK+EVKALMKLKHP R
Sbjct: 459 DRTLGEIAGNLNISREMVRKYEVKALMKLKHPAR 492
>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Glycine max]
Length = 512
Score = 313 bits (802), Expect = 2e-83
Identities = 158/216 (73%), Positives = 180/216 (83%), Gaps = 3/216 (1%)
Frame = -1
Query: 641 FAINKYFQEFANGPKFQDLCQAGAKGLIVAIDRFEPKRKSQLSTYGLFWIRHAIMRSMTL 462
F INKYFQ+FA+GP+FQDLCQAG KGLI AIDRFEPKR+ QLSTY LFWIRH+I+RS+TL
Sbjct: 288 FVINKYFQDFASGPRFQDLCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITL 347
Query: 461 SSFTRVSYGLESVRVEIQKTKLQLMFELNRIPKEEEIAEKMGISLERYHEVMRASQGVIS 282
SSFTRV +GLE VRV+IQ+TKL+L FEL R P EEE+ E++GISLERYHEVM+AS+ ++S
Sbjct: 348 SSFTRVPFGLERVRVDIQRTKLKLTFELQRSPTEEELVERIGISLERYHEVMKASKPILS 407
Query: 281 LHARHNTTQEEFINAITDFD---GDKRSQPXXXXXXXXXXXXXLKPKENLVIRQRYGLDG 111
LH+RH TTQEE+IN ITD D GD R Q LKPKE+LVIRQRYGLDG
Sbjct: 408 LHSRHITTQEEYINGITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDG 467
Query: 110 KGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTR 3
KGDRTLGEIAGNLNISRE+VRKHEVKALMKLKHP R
Sbjct: 468 KGDRTLGEIAGNLNISREIVRKHEVKALMKLKHPAR 503
>ref|XP_002333134.1| predicted protein [Populus trichocarpa] gi|222834948|gb|EEE73397.1|
predicted protein [Populus trichocarpa]
Length = 512
Score = 309 bits (792), Expect = 3e-82
Identities = 159/214 (74%), Positives = 174/214 (81%), Gaps = 1/214 (0%)
Frame = -1
Query: 641 FAINKYFQEFANGPKFQDLCQAGAKGLIVAIDRFEPKRKSQLSTYGLFWIRHAIMRSMTL 462
F I KYFQ+FANG KFQD CQAG KGLI AIDRFEPKR+ +LSTYGLFWIRHAI+RSMTL
Sbjct: 290 FVIKKYFQDFANGTKFQDFCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTL 349
Query: 461 SSFTRVSYGLESVRVEIQKTKLQLMFELNRIPKEEEIAEKMGISLERYHEVMRASQGVIS 282
SSFTRVS+GLES+R EIQK KL+L F+L R P E+EI EK+ IS ERYHEV RAS+ V+S
Sbjct: 350 SSFTRVSFGLESIRSEIQKAKLELWFQLKRQPMEDEIIEKVRISPERYHEVTRASKPVLS 409
Query: 281 LHARHNTTQEEFINAITDFD-GDKRSQPXXXXXXXXXXXXXLKPKENLVIRQRYGLDGKG 105
LH+RH TTQEEFI I D D GD R Q LKPKE+LV+RQRYGLDGKG
Sbjct: 410 LHSRHKTTQEEFIGGIADVDGGDDRRQSALLRLALDDVLDSLKPKESLVVRQRYGLDGKG 469
Query: 104 DRTLGEIAGNLNISREMVRKHEVKALMKLKHPTR 3
DRTLGEIAGNLNISREMVRKHEVKALMKLKHPTR
Sbjct: 470 DRTLGEIAGNLNISREMVRKHEVKALMKLKHPTR 503
>ref|XP_002331841.1| predicted protein [Populus trichocarpa] gi|222875079|gb|EEF12210.1|
predicted protein [Populus trichocarpa]
Length = 512
Score = 309 bits (791), Expect = 3e-82
Identities = 155/214 (72%), Positives = 178/214 (83%), Gaps = 1/214 (0%)
Frame = -1
Query: 641 FAINKYFQEFANGPKFQDLCQAGAKGLIVAIDRFEPKRKSQLSTYGLFWIRHAIMRSMTL 462
F INKYFQ++ANGP++QDLCQAG KGL+ AIDRFEPKR+ +LSTYGLFWIRHAI+RSMTL
Sbjct: 290 FVINKYFQDYANGPRYQDLCQAGVKGLMTAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTL 349
Query: 461 SSFTRVSYGLESVRVEIQKTKLQLMFELNRIPKEEEIAEKMGISLERYHEVMRASQGVIS 282
SSFTRVS+GLES+R EIQK KL+L F+L R P EEI EK+GIS+ERYHEVMRAS+ V+S
Sbjct: 350 SSFTRVSFGLESIRSEIQKAKLELWFQLLRKPTGEEIIEKVGISIERYHEVMRASKPVLS 409
Query: 281 LHARHNTTQEEFINAITDFD-GDKRSQPXXXXXXXXXXXXXLKPKENLVIRQRYGLDGKG 105
LH+RH TTQEE I+ + D + GD R Q LKPKE+LV+RQR+GLDGKG
Sbjct: 410 LHSRHKTTQEELISGVADVNGGDDRRQSALLRLALDDVLDSLKPKESLVVRQRFGLDGKG 469
Query: 104 DRTLGEIAGNLNISREMVRKHEVKALMKLKHPTR 3
DRTLGEIAGNLNISREMVRKHE KALMKLKHPTR
Sbjct: 470 DRTLGEIAGNLNISREMVRKHEAKALMKLKHPTR 503