BLASTX nr result

ID: Papaver23_contig00011114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00011114
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548343.1| PREDICTED: pentatricopeptide repeat-containi...   133   2e-29
ref|XP_003630728.1| Pentatricopeptide repeat-containing protein ...   133   2e-29
gb|AAS80150.1| ACT11D09.4 [Cucumis melo]                              130   1e-28
ref|XP_004173517.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28
ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containi...   130   2e-28

>ref|XP_003548343.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Glycine max]
          Length = 861

 Score =  133 bits (334), Expect = 2e-29
 Identities = 75/174 (43%), Positives = 108/174 (62%), Gaps = 8/174 (4%)
 Frame = +2

Query: 68  FRFLLITTMSLRLLRSIRNLQSPSPYSTTTIRSFANTYRSRRTRIEPLLSTIHG------ 229
           +R LL    + R + S+   +S + +S+    +     R RR RIEP L+ I        
Sbjct: 4   YRLLLRRVAAARPMFSLTQTRSYA-FSSAEEAAAERRRRKRRLRIEPPLNAIRPPPQQGP 62

Query: 230 --DSSSPIHPEPRSSLTGNRLILHKKVQSLIRSGDLDSASSTARLAFCHDTPPTVFTCNS 403
             D ++P  P+  S+L G RL LH +VQSLIR+GDLD+AS+ AR +    T PTVFTCN+
Sbjct: 63  PRDPNAPRLPDSTSALVGPRLSLHNRVQSLIRAGDLDAASAIARHSVFSATRPTVFTCNA 122

Query: 404 VMASLCKYGRYEDAVDLFRFFFVQSRVIPNVDSYNAVINAYCKLGLISEALNVY 565
           ++A++ + GRYE+A+ LF+FFF QS ++PN+ SYN VIN +C  G +  AL VY
Sbjct: 123 IIAAMYRSGRYEEAIGLFQFFFKQSNIVPNIVSYNNVINTHCDEGRVDVALEVY 176


>ref|XP_003630728.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524750|gb|AET05204.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 918

 Score =  133 bits (334), Expect = 2e-29
 Identities = 80/171 (46%), Positives = 103/171 (60%), Gaps = 17/171 (9%)
 Frame = +2

Query: 104 LLRSIRNLQSPSPYSTTTIRSFA----------NTYRSRRTRIEPLLSTIHG-------D 232
           LLRS+R   + SP   TT RSFA             R RR RIEP L+ I         D
Sbjct: 7   LLRSLRRPTTVSPIFITT-RSFAFSSAEEAAAERRRRKRRLRIEPPLNAIRPPPQHQPRD 65

Query: 233 SSSPIHPEPRSSLTGNRLILHKKVQSLIRSGDLDSASSTARLAFCHDTPPTVFTCNSVMA 412
            ++P  P+  SSL G RL LH +VQSLIR+ DLD+AS+ AR +    T PTVFTCN+++A
Sbjct: 66  PNAPRLPDSTSSLVGPRLSLHNRVQSLIRADDLDAASAAARHSVFSSTRPTVFTCNAIIA 125

Query: 413 SLCKYGRYEDAVDLFRFFFVQSRVIPNVDSYNAVINAYCKLGLISEALNVY 565
           ++ +  RY DA+ LF FFF QS ++PN+ SYN VIN +C  G +  AL VY
Sbjct: 126 AMYRAKRYSDAIALFHFFFNQSNLVPNIVSYNNVINTHCDEGRVDVALEVY 176


>gb|AAS80150.1| ACT11D09.4 [Cucumis melo]
          Length = 896

 Score =  130 bits (328), Expect = 1e-28
 Identities = 81/200 (40%), Positives = 115/200 (57%), Gaps = 18/200 (9%)
 Frame = +2

Query: 20  SLNKNPKSPIFAVSASFRFLLITTMSLRLLRSIRNLQSPSPYSTTTIRSFA--------- 172
           SL ++  SP +A +       +TT++        + Q+ SP S    RSF+         
Sbjct: 10  SLRRSSTSPSYAPA-------LTTIAPLNHHIPPSSQTSSPISLLLARSFSFSSAEEAAA 62

Query: 173 -NTYRSRRTRIEPLLSTIHGDS--------SSPIHPEPRSSLTGNRLILHKKVQSLIRSG 325
               R RR RIEP L  +  D+        ++P  P+  S+L G RL LH +VQSLIR+G
Sbjct: 63  ERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQSLIRAG 122

Query: 326 DLDSASSTARLAFCHDTPPTVFTCNSVMASLCKYGRYEDAVDLFRFFFVQSRVIPNVDSY 505
           DLD+ASS AR +   +T PTVFTCN+++A++ +  RY DA+ LF+FFF QS ++PNV SY
Sbjct: 123 DLDAASSVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVPNVVSY 182

Query: 506 NAVINAYCKLGLISEALNVY 565
           N +INA+C  G +   L VY
Sbjct: 183 NNLINAHCDEGRVDVGLEVY 202


>ref|XP_004173517.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like, partial [Cucumis sativus]
          Length = 215

 Score =  130 bits (327), Expect = 1e-28
 Identities = 74/164 (45%), Positives = 100/164 (60%), Gaps = 18/164 (10%)
 Frame = +2

Query: 128 QSPSPYSTTTIRSFA----------NTYRSRRTRIEPLLSTIHGDS--------SSPIHP 253
           Q+ SP S    RSF+             R RR RIEP L  +  D+        ++P  P
Sbjct: 39  QTSSPISLLLARSFSFSSAEEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLP 98

Query: 254 EPRSSLTGNRLILHKKVQSLIRSGDLDSASSTARLAFCHDTPPTVFTCNSVMASLCKYGR 433
           +  S+L G RL LH +VQSLIR+GDLD+ASS AR +   +T PTVFTCN+++A++ +  R
Sbjct: 99  DSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSVFSNTRPTVFTCNAIIAAMYRAKR 158

Query: 434 YEDAVDLFRFFFVQSRVIPNVDSYNAVINAYCKLGLISEALNVY 565
           Y DA+ LF+FFF QS ++PNV SYN +INA+C  G +   L VY
Sbjct: 159 YSDAIALFQFFFNQSNIVPNVVSYNNLINAHCDEGRVDVGLEVY 202


>ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Cucumis sativus]
          Length = 871

 Score =  130 bits (326), Expect = 2e-28
 Identities = 79/172 (45%), Positives = 105/172 (61%), Gaps = 18/172 (10%)
 Frame = +2

Query: 104 LLRSIRNLQSPSPYSTTTIRSFA----------NTYRSRRTRIEPLLSTIHGDS------ 235
           LLRS+R   S SP S    RSF+             R RR RIEP L  +  D+      
Sbjct: 7   LLRSLRR-SSTSP-SLLLARSFSFSSAEEAAAERRRRKRRLRIEPPLHALRRDNYPPPQR 64

Query: 236 --SSPIHPEPRSSLTGNRLILHKKVQSLIRSGDLDSASSTARLAFCHDTPPTVFTCNSVM 409
             ++P  P+  S+L G RL LH +VQSLIR+GDLD+ASS AR +   +T PTVFTCN+++
Sbjct: 65  DPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSVFSNTRPTVFTCNAII 124

Query: 410 ASLCKYGRYEDAVDLFRFFFVQSRVIPNVDSYNAVINAYCKLGLISEALNVY 565
           A++ +  RY DA+ LF+FFF QS ++PNV SYN +INA+C  G +   L VY
Sbjct: 125 AAMYRAKRYSDAIALFQFFFNQSNIVPNVVSYNNLINAHCDEGRVDVGLEVY 176


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