BLASTX nr result

ID: Papaver23_contig00011099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00011099
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633805.1| PREDICTED: RING-H2 finger protein ATL48-like...   124   2e-26
emb|CBI34952.3| unnamed protein product [Vitis vinifera]              123   3e-26
ref|XP_002283368.1| PREDICTED: RING-H2 finger protein ATL48 [Vit...   121   1e-25
dbj|BAF01465.1| hypothetical protein [Arabidopsis thaliana]           121   1e-25
ref|XP_002877592.1| hypoxia-responsive family protein [Arabidops...   121   1e-25

>ref|XP_003633805.1| PREDICTED: RING-H2 finger protein ATL48-like [Vitis vinifera]
          Length = 80

 Score =  124 bits (311), Expect = 2e-26
 Identities = 62/79 (78%), Positives = 73/79 (92%), Gaps = 3/79 (3%)
 Frame = +3

Query: 78  MEKL---ESELDELFGQKKRVKNPLVPMGALMTAGVLTAGLVSFRQGNSNLGQKLMRARV 248
           MEK+   +SE+D+LF QKKRVKNPLVP+GAL+TAGVLTAGL+SF++GNS+LGQKLMRARV
Sbjct: 1   MEKMGTADSEMDQLFEQKKRVKNPLVPIGALLTAGVLTAGLISFKKGNSHLGQKLMRARV 60

Query: 249 VAQGATVALMVGTAYYYGE 305
           V QGATVALM+ TAYYYGE
Sbjct: 61  VVQGATVALMLSTAYYYGE 79


>emb|CBI34952.3| unnamed protein product [Vitis vinifera]
          Length = 77

 Score =  123 bits (309), Expect = 3e-26
 Identities = 60/76 (78%), Positives = 70/76 (92%)
 Frame = +3

Query: 78  MEKLESELDELFGQKKRVKNPLVPMGALMTAGVLTAGLVSFRQGNSNLGQKLMRARVVAQ 257
           M   +SE+D+LF QKKRVKNPLVP+GAL+TAGVLTAGL+SF++GNS+LGQKLMRARVV Q
Sbjct: 1   MGTADSEMDQLFEQKKRVKNPLVPIGALLTAGVLTAGLISFKKGNSHLGQKLMRARVVVQ 60

Query: 258 GATVALMVGTAYYYGE 305
           GATVALM+ TAYYYGE
Sbjct: 61  GATVALMLSTAYYYGE 76


>ref|XP_002283368.1| PREDICTED: RING-H2 finger protein ATL48 [Vitis vinifera]
          Length = 78

 Score =  121 bits (304), Expect = 1e-25
 Identities = 61/76 (80%), Positives = 65/76 (85%)
 Frame = +3

Query: 78  MEKLESELDELFGQKKRVKNPLVPMGALMTAGVLTAGLVSFRQGNSNLGQKLMRARVVAQ 257
           M   E  ++ L  QKKR+KNPLVP+GALMTAGVLTAGLVSFRQGNS LGQ LMRARVV Q
Sbjct: 1   MSTSEPHMENLLNQKKRIKNPLVPVGALMTAGVLTAGLVSFRQGNSRLGQLLMRARVVVQ 60

Query: 258 GATVALMVGTAYYYGE 305
           GATVALMVGTAYYYGE
Sbjct: 61  GATVALMVGTAYYYGE 76


>dbj|BAF01465.1| hypothetical protein [Arabidopsis thaliana]
          Length = 95

 Score =  121 bits (304), Expect = 1e-25
 Identities = 61/92 (66%), Positives = 76/92 (82%), Gaps = 3/92 (3%)
 Frame = +3

Query: 54  PKDFFEILMEKLES---ELDELFGQKKRVKNPLVPMGALMTAGVLTAGLVSFRQGNSNLG 224
           P  F  +++EK+ S   ++++LF +KKRV+NPLVP+GALMTAGVLTAGL+SFR+GNS LG
Sbjct: 4   PLWFLTLVLEKMSSVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLG 63

Query: 225 QKLMRARVVAQGATVALMVGTAYYYGETFTRK 320
           Q LMRARVV QGATVALMVGT YYYG+   +K
Sbjct: 64  QVLMRARVVVQGATVALMVGTGYYYGDNPWKK 95


>ref|XP_002877592.1| hypoxia-responsive family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297323430|gb|EFH53851.1| hypoxia-responsive
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 366

 Score =  121 bits (303), Expect = 1e-25
 Identities = 58/76 (76%), Positives = 69/76 (90%)
 Frame = +3

Query: 78  MEKLESELDELFGQKKRVKNPLVPMGALMTAGVLTAGLVSFRQGNSNLGQKLMRARVVAQ 257
           M  +E ++++LF +KKRV+NPLVP+GALMTAGVLTAGL+SFR+GNS LGQ LMRARVV Q
Sbjct: 1   MSAVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLGQVLMRARVVVQ 60

Query: 258 GATVALMVGTAYYYGE 305
           GATVALMVGTAYYYG+
Sbjct: 61  GATVALMVGTAYYYGD 76


Top