BLASTX nr result

ID: Papaver23_contig00011096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00011096
         (1168 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280389.1| PREDICTED: SWI/SNF complex subunit SWI3A [Vi...   368   2e-99
emb|CAN80839.1| hypothetical protein VITISV_043833 [Vitis vinifera]   368   2e-99
ref|XP_003602787.1| SWI/SNF complex subunit SMARCC2 [Medicago tr...   340   5e-91
ref|XP_002322279.1| chromatin remodeling complex subunit [Populu...   333   4e-89
ref|XP_003527961.1| PREDICTED: SWI/SNF complex subunit SWI3A-lik...   327   5e-87

>ref|XP_002280389.1| PREDICTED: SWI/SNF complex subunit SWI3A [Vitis vinifera]
            gi|297734457|emb|CBI15704.3| unnamed protein product
            [Vitis vinifera]
          Length = 563

 Score =  368 bits (944), Expect = 2e-99
 Identities = 205/377 (54%), Positives = 256/377 (67%), Gaps = 2/377 (0%)
 Frame = -3

Query: 1127 EENSKPLPANEPEQQELYSIPIYSSWFSWDEIHEVEITFLKEFFNGTSISRTPKVYKEYR 948
            + +SK    +EPE  +LY+IPI+SSWFSWDEIHE E   LKEFF+G+SISRTPK+YKEYR
Sbjct: 6    DPSSKLTRHDEPEL-DLYTIPIHSSWFSWDEIHEKEKISLKEFFDGSSISRTPKIYKEYR 64

Query: 947  DFIINKYREDPSRRLTFTEIRKSLIGDVCLLHKVFLFLEKWGLINFSVTTSSSLDGGQNT 768
            DFII+KYREDPSRRLTF EIRKSL+GDV LLHKVFLFLE+WGLINF         GG+++
Sbjct: 65   DFIISKYREDPSRRLTFAEIRKSLVGDVSLLHKVFLFLERWGLINFGA------PGGEDS 118

Query: 767  LAXXXXXXXXXXXVRFEEGAPNGVRVVAEPGSAKAVASLPKTLNEDVEKGGENGFRFPPL 588
             A           VR E+GAPNG+RVVA P S K + ++P TL+ + E   ENGFR PPL
Sbjct: 119  AA--VAEGAERHRVRSEDGAPNGIRVVAMPNSLKPI-TMPLTLDVNGEV-DENGFRLPPL 174

Query: 587  ASYNDVFGDLVKRKEVVCGTCGEECGSGYYDSDKQKGQVLCVKCFK--VYCESNPVEDFN 414
            ASY+DVF DL K K +VCG CG+ C SG+Y+  K    V+CVKCFK   Y E+  V+DF 
Sbjct: 175  ASYSDVFSDLTKEKGLVCGNCGDNCDSGHYNCLK-GSPVICVKCFKNGNYGENRSVDDFK 233

Query: 413  FHDSKESVNNTGTDAWTEAETXXXLESVMKHGDDWDLVAQDVQTKNKLECISRLIELPFG 234
            F+D  E+  N G   WTEAET   LESV+KHGDDW+LV Q+VQTK KL+CIS+LIELPFG
Sbjct: 234  FNDCNENRGNRGA-VWTEAETLLLLESVLKHGDDWELVVQNVQTKTKLDCISKLIELPFG 292

Query: 233  ELVLSMTNGKGDEKNTTDSNNVKSHELSSAGLQEIAKETIEKENHYQEPTKETVQTAEVE 54
            EL+L  + GK    N    +N  S +     L+  ++E I+      E   E+ Q  + E
Sbjct: 293  ELMLGSSLGKSRASN----DNTSSIKPVQTSLE--SQENIKNGGQGDEQINESEQNGDAE 346

Query: 53   IEEPPSKRRCIAPFADS 3
             + PP KR+CI   +D+
Sbjct: 347  NQGPPLKRKCITSLSDA 363


>emb|CAN80839.1| hypothetical protein VITISV_043833 [Vitis vinifera]
          Length = 563

 Score =  368 bits (944), Expect = 2e-99
 Identities = 205/377 (54%), Positives = 256/377 (67%), Gaps = 2/377 (0%)
 Frame = -3

Query: 1127 EENSKPLPANEPEQQELYSIPIYSSWFSWDEIHEVEITFLKEFFNGTSISRTPKVYKEYR 948
            + +SK    +EPE  +LY+IPI+SSWFSWDEIHE E   LKEFF+G+SISRTPK+YKEYR
Sbjct: 6    DPSSKLTRHDEPEL-DLYTIPIHSSWFSWDEIHEKEKISLKEFFDGSSISRTPKIYKEYR 64

Query: 947  DFIINKYREDPSRRLTFTEIRKSLIGDVCLLHKVFLFLEKWGLINFSVTTSSSLDGGQNT 768
            DFII+KYREDPSRRLTF EIRKSL+GDV LLHKVFLFLE+WGLINF         GG+++
Sbjct: 65   DFIISKYREDPSRRLTFAEIRKSLVGDVSLLHKVFLFLERWGLINFGA------PGGEDS 118

Query: 767  LAXXXXXXXXXXXVRFEEGAPNGVRVVAEPGSAKAVASLPKTLNEDVEKGGENGFRFPPL 588
             A           VR E+GAPNG+RVVA P S K + ++P TL+ + E   ENGFR PPL
Sbjct: 119  AA--VAEGAERHRVRSEDGAPNGIRVVAMPNSLKPI-TMPLTLDVNGEV-DENGFRLPPL 174

Query: 587  ASYNDVFGDLVKRKEVVCGTCGEECGSGYYDSDKQKGQVLCVKCFK--VYCESNPVEDFN 414
            ASY+DVF DL K K +VCG CG+ C SG+Y+  K    V+CVKCFK   Y E+  V+DF 
Sbjct: 175  ASYSDVFSDLTKEKGLVCGNCGDNCDSGHYNCLK-GSPVICVKCFKNGNYGENRSVDDFK 233

Query: 413  FHDSKESVNNTGTDAWTEAETXXXLESVMKHGDDWDLVAQDVQTKNKLECISRLIELPFG 234
            F+D  E+  N G   WTEAET   LESV+KHGDDW+LV Q+VQTK KL+CIS+LIELPFG
Sbjct: 234  FNDCNENRGNRGA-VWTEAETLLLLESVLKHGDDWELVVQNVQTKTKLDCISKLIELPFG 292

Query: 233  ELVLSMTNGKGDEKNTTDSNNVKSHELSSAGLQEIAKETIEKENHYQEPTKETVQTAEVE 54
            EL+L  + GK    N    +N  S +     L+  ++E I+      E   E+ Q  + E
Sbjct: 293  ELMLGSSLGKSRASN----DNTSSIKPVQTSLE--SQENIKNGGQGDEQINESEQNGDAE 346

Query: 53   IEEPPSKRRCIAPFADS 3
             + PP KR+CI   +D+
Sbjct: 347  NQGPPLKRKCITSLSDA 363


>ref|XP_003602787.1| SWI/SNF complex subunit SMARCC2 [Medicago truncatula]
            gi|355491835|gb|AES73038.1| SWI/SNF complex subunit
            SMARCC2 [Medicago truncatula]
          Length = 540

 Score =  340 bits (871), Expect = 5e-91
 Identities = 187/365 (51%), Positives = 241/365 (66%), Gaps = 5/365 (1%)
 Frame = -3

Query: 1082 ELYSIPIYSSWFSWDEIHEVEITFLKEFFNGTSISRTPKVYKEYRDFIINKYREDPSRRL 903
            ELY+IP  S WF+WDEIHE E T  KE+F+GTSI+RTPK+YKEYRDFIINKYRE+PSRRL
Sbjct: 14   ELYTIPSSSKWFAWDEIHETEKTAFKEYFDGTSITRTPKIYKEYRDFIINKYREEPSRRL 73

Query: 902  TFTEIRKSLIGDVCLLHKVFLFLEKWGLINFSVTTSSSLDGGQNTLAXXXXXXXXXXXVR 723
            TFTE+RKSL+GDV  L+KVFLFLE WGLIN+   ++ + DG                 ++
Sbjct: 74   TFTEVRKSLVGDVTFLNKVFLFLECWGLINYGAPSAGN-DG-----EAEKEHEKERCKLK 127

Query: 722  FEEGAPNGVRVVAEPGSAKAVASLPKTLNEDVEKGGEN--GFRFPPLASYNDVFGDLVKR 549
             EEGAPNG+RVVA P S K + SLP+        G E+  G +  PLASY+DV+GDL++R
Sbjct: 128  VEEGAPNGIRVVATPNSLKPI-SLPRDTKIAAGGGDESGAGVKIAPLASYSDVYGDLIRR 186

Query: 548  KEVVCGTCGEECGSGYYDSDKQKGQVLCVKCFK--VYCESNPVEDFNFHDSKESVNNTGT 375
            KEV CG CG++CGSG+Y S K    ++C KCFK   Y E   +EDF  ++S E ++   +
Sbjct: 187  KEVNCGNCGDKCGSGHYRSTKD-NFIICTKCFKNGNYGEKRSMEDFKLNESSE-ISANHS 244

Query: 374  DAWTEAETXXXLESVMKHGDDWDLVAQDVQTKNKLECISRLIELPFGELVLSMTNGKGDE 195
              WTE ET   LESV+KHGDDW+LVAQ V+TK KLECIS+LIELPFGEL+L+      + 
Sbjct: 245  AVWTEGETLLLLESVLKHGDDWELVAQSVRTKTKLECISKLIELPFGELMLASVRRNDNS 304

Query: 194  KNTTD-SNNVKSHELSSAGLQEIAKETIEKENHYQEPTKETVQTAEVEIEEPPSKRRCIA 18
             + T   NN    ++SS+  Q    ET   ++   EP  E  Q  +  + E PSKRR ++
Sbjct: 305  NSVTGIVNNRNQVQVSSSDHQ----ETSMTQDQSSEPKNEVEQNGDA-VNENPSKRRRVS 359

Query: 17   PFADS 3
              +DS
Sbjct: 360  TLSDS 364


>ref|XP_002322279.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222869275|gb|EEF06406.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 570

 Score =  333 bits (855), Expect = 4e-89
 Identities = 187/382 (48%), Positives = 241/382 (63%), Gaps = 5/382 (1%)
 Frame = -3

Query: 1133 NDEENSKPLPANEPEQQELYSIPIYSSWFSWDEIHEVEITFLKEFFNGTSISRTPKVYKE 954
            + + N  P+  NEPE  +LY+IP YSSWFSW +IHE E   L+EFF+G+SI+RTPK+YKE
Sbjct: 6    HSDPNLNPIRPNEPEL-DLYTIPSYSSWFSWHDIHETERVALREFFDGSSITRTPKIYKE 64

Query: 953  YRDFIINKYREDPSRRLTFTEIRKSLIGDVCLLHKVFLFLEKWGLINFSVTTSSSLDGGQ 774
            YRDFIINKYREDPSRRLTFTEIRKSL+GDV LL+KVFLFL  WGLINFS   +  +  G 
Sbjct: 65   YRDFIINKYREDPSRRLTFTEIRKSLVGDVSLLNKVFLFLNNWGLINFSCEKNEEIGLGS 124

Query: 773  NTLAXXXXXXXXXXXVRFEEGAPNGVRVVAEPGSAK--AVASLPKTLNEDVEKGGENGFR 600
              +            VR E+GAPNGVR+V  P   K  +V S+  +       G   G +
Sbjct: 125  GNV-----------DVRVEDGAPNGVRIVEMPDKLKPISVGSVQSSAEGSGGGGSGTGLK 173

Query: 599  FPPLASYNDVFGDLV-KRKEVVCGTCGEECGSGYYDSDKQKGQVLCVKCFK--VYCESNP 429
             PPLASY+DVFG+LV K+KEVVCG CG  C SG Y+  K    ++C KCF    Y E+  
Sbjct: 174  LPPLASYSDVFGELVGKKKEVVCGNCGGSCDSGQYEHSK-GDYLICQKCFNDGTYGENKS 232

Query: 428  VEDFNFHDSKESVNNTGTDAWTEAETXXXLESVMKHGDDWDLVAQDVQTKNKLECISRLI 249
             +DF    S E+ N +    WTE ET   LESV +HG+DWDLVAQ+V+TK KL+CIS+LI
Sbjct: 233  KDDFKLKVSAEN-NGSNAAVWTEEETLRLLESVSRHGNDWDLVAQNVKTKTKLDCISKLI 291

Query: 248  ELPFGELVLSMTNGKGDEKNTTDSNNVKSHELSSAGLQEIAKETIEKENHYQEPTKETVQ 69
            ELPFG+L+LS T GKG+      S N  S ++ +A  +   ++  + E+   E      +
Sbjct: 292  ELPFGDLILSSTYGKGNSSGQIGSTN-NSKQVPAAPSEH--QDDTKHEDQLHEQMNANEE 348

Query: 68   TAEVEIEEPPSKRRCIAPFADS 3
              +V  + P  KRR I   +D+
Sbjct: 349  KGDVMDDGPLLKRRRITSVSDA 370


>ref|XP_003527961.1| PREDICTED: SWI/SNF complex subunit SWI3A-like [Glycine max]
          Length = 522

 Score =  327 bits (837), Expect = 5e-87
 Identities = 184/369 (49%), Positives = 232/369 (62%), Gaps = 3/369 (0%)
 Frame = -3

Query: 1100 NEPEQQELYSIPIYSSWFSWDEIHEVEITFLKEFFNGTSISRTPKVYKEYRDFIINKYRE 921
            N   + ELY+IP  S WF+W+EIHE E T  KE+F+G SI+RTPK+YKEYRDFIINKYRE
Sbjct: 8    NSDFELELYTIPSSSRWFAWEEIHETERTAFKEYFDGNSITRTPKIYKEYRDFIINKYRE 67

Query: 920  DPSRRLTFTEIRKSLIGDVCLLHKVFLFLEKWGLINFSVTTSSSLDGGQNTLAXXXXXXX 741
            +PSRRLTFTE+RKSL+GDV  LHK FL LE WGLIN+     SS        A       
Sbjct: 68   EPSRRLTFTEVRKSLVGDVTFLHKAFLLLEHWGLINYGTAQPSS-------GADAAEEEE 120

Query: 740  XXXXVRFEEGAPNGVRVVAEPGSAKAVASLPKTLNEDVEKGGENGFRFPPLASYNDVFGD 561
                VR EEGAP G+RV A P S K +  LP+     V   G +  + PPLASY+DV+GD
Sbjct: 121  EHRKVRLEEGAPGGIRVAATPNSLKPML-LPRNGKSGVNASGAS-LKLPPLASYSDVYGD 178

Query: 560  LVKRKEVVCGTCGEECGSGYYDSDKQKGQVLCVKCFKV--YCESNPVEDFNFHDSKESVN 387
            L+++KE  CG CG +CGSG+Y    Q   ++C+ CFK   Y E    EDF   +S E+  
Sbjct: 179  LIRQKEGNCGLCGHKCGSGHYRC-TQDNFIICINCFKSGNYGEKRSTEDFVLSESSENSG 237

Query: 386  NTGTDAWTEAETXXXLESVMKHGDDWDLVAQDVQTKNKLECISRLIELPFGELVLSMTNG 207
               T  WTEAET   LESV+KHGDDW+LVAQ VQTK KL+CIS+LIELPFGEL+L   + 
Sbjct: 238  KHDT-VWTEAETLLLLESVLKHGDDWELVAQSVQTKTKLDCISKLIELPFGELMLGPAHR 296

Query: 206  KGDEKNTTD-SNNVKSHELSSAGLQEIAKETIEKENHYQEPTKETVQTAEVEIEEPPSKR 30
              +  +     NN K  + SS+  QEI+K     ++   E T E  Q  +  ++E PSKR
Sbjct: 297  NVNINDANGIVNNAKQVQSSSSDNQEISK----TKDQSPEFTNENEQNGDA-VKESPSKR 351

Query: 29   RCIAPFADS 3
            + +A  +DS
Sbjct: 352  QRVASLSDS 360


Top