BLASTX nr result

ID: Papaver23_contig00010930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00010930
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517310.1| ribosome biogenesis protein bms1, putative [...    97   1e-18
ref|XP_004161775.1| PREDICTED: ribosome biogenesis protein BMS1 ...    94   9e-18
ref|XP_004139860.1| PREDICTED: ribosome biogenesis protein BMS1 ...    94   9e-18
ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 ...    94   1e-17
ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 ...    94   1e-17

>ref|XP_002517310.1| ribosome biogenesis protein bms1, putative [Ricinus communis]
           gi|223543573|gb|EEF45103.1| ribosome biogenesis protein
           bms1, putative [Ricinus communis]
          Length = 284

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 64/144 (44%), Positives = 86/144 (59%), Gaps = 33/144 (22%)
 Frame = -3

Query: 468 KQKGTPLKLSKKRTALVN-FTPETKVSMYKGAPIWTLSGIRGKINEAAK----------- 325
           K  G P K+ KK   + N FT + +V+ ++GA I T+SGIRG++ +AAK           
Sbjct: 28  KLVGYPCKIFKKTALITNMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEEIGNQPKKKG 87

Query: 324 ---REGIAKCTFKCRISMSDIVFMRVWRQVEVPRFFNPSTT-LEPCD-------SIA--- 187
              REGIA+CTF+ RI MSDIVF+R W QVEVP+F+NP TT L+P +       S+A   
Sbjct: 88  GAPREGIARCTFEDRILMSDIVFLRAWTQVEVPQFYNPLTTALQPREENWQGMKSVAELR 147

Query: 186 -------PVNKDSLNKDDPAQRRV 136
                  PVNKDSL K  P +R++
Sbjct: 148 RENNLPIPVNKDSLYK--PIERKL 169


>ref|XP_004161775.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Cucumis
           sativus]
          Length = 553

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 59/144 (40%), Positives = 84/144 (58%), Gaps = 34/144 (23%)
 Frame = -3

Query: 468 KQKGTPLKLSKKRTALVN--FTPETKVSMYKGAPIWTLSGIRGKINEAAK---------- 325
           K  G P K+ KK TAL+   FT + +++ ++GA + T+SGIRG++ +AAK          
Sbjct: 298 KLVGYPCKIFKK-TALIKDMFTSDLEIARFEGASVRTVSGIRGQVKKAAKEEIGNQPKKK 356

Query: 324 ----REGIAKCTFKCRISMSDIVFMRVWRQVEVPRFFNPSTT-LEPCDSI---------- 190
               +EGIA+CTF+ +I MSDIVF+R W +VEVP+F+NP TT L+P D +          
Sbjct: 357 GGPPKEGIARCTFEDKIRMSDIVFLRAWTKVEVPKFYNPLTTALQPRDRVWQGMKTVAEL 416

Query: 189 -------APVNKDSLNKDDPAQRR 139
                   P+NKDSL K    Q+R
Sbjct: 417 RKEHNLPIPLNKDSLYKPIERQKR 440


>ref|XP_004139860.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Cucumis sativus]
          Length = 1198

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 59/144 (40%), Positives = 84/144 (58%), Gaps = 34/144 (23%)
 Frame = -3

Query: 468  KQKGTPLKLSKKRTALVN--FTPETKVSMYKGAPIWTLSGIRGKINEAAK---------- 325
            K  G P K+ KK TAL+   FT + +++ ++GA + T+SGIRG++ +AAK          
Sbjct: 943  KLVGYPCKIFKK-TALIKDMFTSDLEIARFEGASVRTVSGIRGQVKKAAKEEIGNQPKKK 1001

Query: 324  ----REGIAKCTFKCRISMSDIVFMRVWRQVEVPRFFNPSTT-LEPCDSI---------- 190
                +EGIA+CTF+ +I MSDIVF+R W +VEVP+F+NP TT L+P D +          
Sbjct: 1002 GGPPKEGIARCTFEDKIRMSDIVFLRAWTKVEVPKFYNPLTTALQPRDRVWQGMKTVAEL 1061

Query: 189  -------APVNKDSLNKDDPAQRR 139
                    P+NKDSL K    Q+R
Sbjct: 1062 RKEHNLPIPLNKDSLYKPIERQKR 1085


>ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1181

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 64/151 (42%), Positives = 86/151 (56%), Gaps = 34/151 (22%)
 Frame = -3

Query: 468  KQKGTPLKLSKKRTALVN--FTPETKVSMYKGAPIWTLSGIRGKINEAAK---------- 325
            K  G P K+ KK TAL+   FT + +V+ ++GA I T+SGIRG++ +AAK          
Sbjct: 923  KLVGYPCKIFKK-TALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEEIGNQAKRK 981

Query: 324  ----REGIAKCTFKCRISMSDIVFMRVWRQVEVPRFFNPSTT-LEPCDSI---------- 190
                +EGIA+CTF+ +I MSDIVF+R W QVEVP+F+NP TT L+P D            
Sbjct: 982  GGQTKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPRDMTWKGMRTVAEL 1041

Query: 189  -------APVNKDSLNKDDPAQRRVELKQRR 118
                    PVNKDSL K      ++E K R+
Sbjct: 1042 RREHNLPIPVNKDSLYK------KIERKPRK 1066


>ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1176

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 64/151 (42%), Positives = 86/151 (56%), Gaps = 34/151 (22%)
 Frame = -3

Query: 468  KQKGTPLKLSKKRTALVN--FTPETKVSMYKGAPIWTLSGIRGKINEAAK---------- 325
            K  G P K+ KK TAL+   FT + +V+ ++GA I T+SGIRG++ +AAK          
Sbjct: 918  KLVGYPCKIFKK-TALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEEIGNQAKRK 976

Query: 324  ----REGIAKCTFKCRISMSDIVFMRVWRQVEVPRFFNPSTT-LEPCDS----------- 193
                +EGIA+CTF+ +I MSDIVF+R W QVEVP+F+NP TT L+P D            
Sbjct: 977  GGQTKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPRDMTWKGMKTVAEL 1036

Query: 192  ------IAPVNKDSLNKDDPAQRRVELKQRR 118
                    PVNKDSL K      ++E K R+
Sbjct: 1037 RREHNLAIPVNKDSLYK------KIERKPRK 1061


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