BLASTX nr result

ID: Papaver23_contig00010881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00010881
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 ...   114   6e-24
ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 ...   114   6e-24
ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...   112   4e-23
emb|CBI17233.3| unnamed protein product [Vitis vinifera]              112   4e-23
ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protei...   110   1e-22

>ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1181

 Score =  114 bits (286), Expect = 6e-24
 Identities = 63/120 (52%), Positives = 82/120 (68%)
 Frame = -2

Query: 408  NKAVFRISATGVILDFTQAAEIVAKIAKKRKQVRTPLKIFEETALTKDMFTSDLEIEWLE 229
            N+A FRI+AT V+L+F  AA IV KI    K V  P KIF++TAL KDMFTSDLE+   E
Sbjct: 897  NQATFRITATAVVLEFNHAARIVKKI----KLVGYPCKIFKKTALIKDMFTSDLEVARFE 952

Query: 228  GAEVQTARGAQGNVKKAAQEKLVIKLIRKGDQPKEGIASSSLQHEISLSDKVFMCVWDQV 49
            GA ++T  G +G VKKAA+E++  +  RKG Q KEGIA  + + +I +SD VF+  W QV
Sbjct: 953  GAAIRTVSGIRGQVKKAAKEEIGNQAKRKGGQTKEGIARCTFEDKILMSDIVFLRAWTQV 1012


>ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1176

 Score =  114 bits (286), Expect = 6e-24
 Identities = 63/120 (52%), Positives = 82/120 (68%)
 Frame = -2

Query: 408  NKAVFRISATGVILDFTQAAEIVAKIAKKRKQVRTPLKIFEETALTKDMFTSDLEIEWLE 229
            N+A FRI+AT V+L+F  AA IV KI    K V  P KIF++TAL KDMFTSDLE+   E
Sbjct: 892  NQATFRITATAVVLEFNHAARIVKKI----KLVGYPCKIFKKTALIKDMFTSDLEVARFE 947

Query: 228  GAEVQTARGAQGNVKKAAQEKLVIKLIRKGDQPKEGIASSSLQHEISLSDKVFMCVWDQV 49
            GA ++T  G +G VKKAA+E++  +  RKG Q KEGIA  + + +I +SD VF+  W QV
Sbjct: 948  GAAIRTVSGIRGQVKKAAKEEIGNQAKRKGGQTKEGIARCTFEDKILMSDIVFLRAWTQV 1007


>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis vinifera]
          Length = 1139

 Score =  112 bits (279), Expect = 4e-23
 Identities = 63/120 (52%), Positives = 81/120 (67%)
 Frame = -2

Query: 408  NKAVFRISATGVILDFTQAAEIVAKIAKKRKQVRTPLKIFEETALTKDMFTSDLEIEWLE 229
            N+A FRI AT V+L+F  AA +V KI    K V  P KIF++TAL K+MFTSDLEI   E
Sbjct: 858  NQATFRIIATAVVLEFNHAARLVKKI----KLVGEPCKIFKKTALIKNMFTSDLEIARFE 913

Query: 228  GAEVQTARGAQGNVKKAAQEKLVIKLIRKGDQPKEGIASSSLQHEISLSDKVFMCVWDQV 49
            GA VQTA G +G VKKAA+E+L  +  +KG  P+EGIA  + +  I +SD VF+  W +V
Sbjct: 914  GAAVQTASGIRGQVKKAAKEELGNQPKKKGGLPREGIARCTFEDRILMSDLVFLRAWTEV 973


>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score =  112 bits (279), Expect = 4e-23
 Identities = 63/120 (52%), Positives = 81/120 (67%)
 Frame = -2

Query: 408  NKAVFRISATGVILDFTQAAEIVAKIAKKRKQVRTPLKIFEETALTKDMFTSDLEIEWLE 229
            N+A FRI AT V+L+F  AA +V KI    K V  P KIF++TAL K+MFTSDLEI   E
Sbjct: 1024 NQATFRIIATAVVLEFNHAARLVKKI----KLVGEPCKIFKKTALIKNMFTSDLEIARFE 1079

Query: 228  GAEVQTARGAQGNVKKAAQEKLVIKLIRKGDQPKEGIASSSLQHEISLSDKVFMCVWDQV 49
            GA VQTA G +G VKKAA+E+L  +  +KG  P+EGIA  + +  I +SD VF+  W +V
Sbjct: 1080 GAAVQTASGIRGQVKKAAKEELGNQPKKKGGLPREGIARCTFEDRILMSDLVFLRAWTEV 1139


>ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507881|gb|AES89023.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 1175

 Score =  110 bits (275), Expect = 1e-22
 Identities = 61/120 (50%), Positives = 81/120 (67%)
 Frame = -2

Query: 408  NKAVFRISATGVILDFTQAAEIVAKIAKKRKQVRTPLKIFEETALTKDMFTSDLEIEWLE 229
            N+A FRI+AT V+++F  AA IV KI    K V  P KIF++TAL KDMFTSDLE+   E
Sbjct: 893  NQATFRITATAVVVEFNHAARIVKKI----KLVGYPCKIFKKTALIKDMFTSDLEVARFE 948

Query: 228  GAEVQTARGAQGNVKKAAQEKLVIKLIRKGDQPKEGIASSSLQHEISLSDKVFMCVWDQV 49
            GA ++T  G +G VKK A+E++  +  RKG Q KEGIA  + + +I +SD VF+  W QV
Sbjct: 949  GAAIRTVSGIRGQVKKVAKEEIGNQPKRKGGQIKEGIARCTFEDKILMSDIVFLRAWTQV 1008


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