BLASTX nr result

ID: Papaver23_contig00010880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00010880
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 ...   213   2e-53
ref|XP_003606827.1| Ribosome biogenesis protein BMS1-like protei...   213   3e-53
ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protei...   213   3e-53
ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protei...   213   3e-53
ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 ...   209   3e-52

>ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1181

 Score =  213 bits (543), Expect = 2e-53
 Identities = 105/162 (64%), Positives = 127/162 (78%), Gaps = 2/162 (1%)
 Frame = +3

Query: 147  ELNDPDEVKRLEIEGFRAGTYLKLEVRDVPFASTENIDPYRPILVGGISLEEENVGCMQA 326
            ELND DE  RLEIEGF+ GTYL+LE+RDVP    E  DPY PILVGGI + EENVG MQA
Sbjct: 760  ELNDLDEATRLEIEGFQTGTYLRLEIRDVPCEMVEYFDPYHPILVGGIGIGEENVGYMQA 819

Query: 327  RLKQHRWHLKLLKTREPIIVSVGWRRYQTRLVYAQED-DGLH-LIDHIPEYADCLAMFWG 500
            RLK+HRWH K+LKTR+PIIVSVGWRRYQT  +YA ED +G H ++ + PE+  CLAMFWG
Sbjct: 820  RLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPIYAIEDSNGRHRMLKYTPEHMHCLAMFWG 879

Query: 501  PIAPQDSGVVAVQNLAGNKAPFRVSAMGVVVESQPVAEIVKK 626
            P+AP ++GVVA+QNL+ N+A FR++A  VV+E    A IVKK
Sbjct: 880  PLAPPNTGVVAIQNLSNNQATFRITATAVVLEFNHAARIVKK 921



 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 35/49 (71%), Positives = 42/49 (85%)
 Frame = +3

Query: 3   AGVGDFPLYGITSIADPCSLPSSAKVKGVGDKERLFYAPMSGLGDLFYE 149
           AGVGD+ L GIT++ DPC LPS+AK KG+ DKE+LFYAPMSGLGDL Y+
Sbjct: 306 AGVGDYSLAGITALPDPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYD 354


>ref|XP_003606827.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507882|gb|AES89024.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 988

 Score =  213 bits (541), Expect = 3e-53
 Identities = 106/162 (65%), Positives = 126/162 (77%), Gaps = 2/162 (1%)
 Frame = +3

Query: 147  ELNDPDEVKRLEIEGFRAGTYLKLEVRDVPFASTENIDPYRPILVGGISLEEENVGCMQA 326
            ELND DE  RLE+EGFR GTYL+LEV DVP    E+ DPY PILVGG+ L EENVG MQA
Sbjct: 756  ELNDLDEDTRLEVEGFRTGTYLRLEVHDVPCEMVEHFDPYHPILVGGVGLGEENVGYMQA 815

Query: 327  RLKQHRWHLKLLKTREPIIVSVGWRRYQTRLVYAQED-DGLH-LIDHIPEYADCLAMFWG 500
            RLK+HRWH K+LKTR+PIIVSVGWRRYQT  VYA ED +G H ++ + PE+  CLAMFWG
Sbjct: 816  RLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDLNGRHRMLKYTPEHMHCLAMFWG 875

Query: 501  PIAPQDSGVVAVQNLAGNKAPFRVSAMGVVVESQPVAEIVKK 626
            P+AP ++G+VAVQ L+ N+A FR++A  VVVE    A IVKK
Sbjct: 876  PLAPPNTGIVAVQTLSNNQATFRITATAVVVEFNHAARIVKK 917



 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 32/49 (65%), Positives = 40/49 (81%)
 Frame = +3

Query: 3   AGVGDFPLYGITSIADPCSLPSSAKVKGVGDKERLFYAPMSGLGDLFYE 149
           AGVGD+ L  +T + DPC LPS+AK KG+ DKE+LFYAPMSG+GDL Y+
Sbjct: 301 AGVGDYGLAHVTGLPDPCPLPSAAKKKGLRDKEKLFYAPMSGVGDLLYD 349


>ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507881|gb|AES89023.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 1175

 Score =  213 bits (541), Expect = 3e-53
 Identities = 106/162 (65%), Positives = 126/162 (77%), Gaps = 2/162 (1%)
 Frame = +3

Query: 147  ELNDPDEVKRLEIEGFRAGTYLKLEVRDVPFASTENIDPYRPILVGGISLEEENVGCMQA 326
            ELND DE  RLE+EGFR GTYL+LEV DVP    E+ DPY PILVGG+ L EENVG MQA
Sbjct: 756  ELNDLDEDTRLEVEGFRTGTYLRLEVHDVPCEMVEHFDPYHPILVGGVGLGEENVGYMQA 815

Query: 327  RLKQHRWHLKLLKTREPIIVSVGWRRYQTRLVYAQED-DGLH-LIDHIPEYADCLAMFWG 500
            RLK+HRWH K+LKTR+PIIVSVGWRRYQT  VYA ED +G H ++ + PE+  CLAMFWG
Sbjct: 816  RLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDLNGRHRMLKYTPEHMHCLAMFWG 875

Query: 501  PIAPQDSGVVAVQNLAGNKAPFRVSAMGVVVESQPVAEIVKK 626
            P+AP ++G+VAVQ L+ N+A FR++A  VVVE    A IVKK
Sbjct: 876  PLAPPNTGIVAVQTLSNNQATFRITATAVVVEFNHAARIVKK 917



 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 32/49 (65%), Positives = 40/49 (81%)
 Frame = +3

Query: 3   AGVGDFPLYGITSIADPCSLPSSAKVKGVGDKERLFYAPMSGLGDLFYE 149
           AGVGD+ L  +T + DPC LPS+AK KG+ DKE+LFYAPMSG+GDL Y+
Sbjct: 301 AGVGDYGLAHVTGLPDPCPLPSAAKKKGLRDKEKLFYAPMSGVGDLLYD 349


>ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507880|gb|AES89022.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 1200

 Score =  213 bits (541), Expect = 3e-53
 Identities = 106/162 (65%), Positives = 126/162 (77%), Gaps = 2/162 (1%)
 Frame = +3

Query: 147  ELNDPDEVKRLEIEGFRAGTYLKLEVRDVPFASTENIDPYRPILVGGISLEEENVGCMQA 326
            ELND DE  RLE+EGFR GTYL+LEV DVP    E+ DPY PILVGG+ L EENVG MQA
Sbjct: 756  ELNDLDEDTRLEVEGFRTGTYLRLEVHDVPCEMVEHFDPYHPILVGGVGLGEENVGYMQA 815

Query: 327  RLKQHRWHLKLLKTREPIIVSVGWRRYQTRLVYAQED-DGLH-LIDHIPEYADCLAMFWG 500
            RLK+HRWH K+LKTR+PIIVSVGWRRYQT  VYA ED +G H ++ + PE+  CLAMFWG
Sbjct: 816  RLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDLNGRHRMLKYTPEHMHCLAMFWG 875

Query: 501  PIAPQDSGVVAVQNLAGNKAPFRVSAMGVVVESQPVAEIVKK 626
            P+AP ++G+VAVQ L+ N+A FR++A  VVVE    A IVKK
Sbjct: 876  PLAPPNTGIVAVQTLSNNQATFRITATAVVVEFNHAARIVKK 917



 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 32/49 (65%), Positives = 40/49 (81%)
 Frame = +3

Query: 3   AGVGDFPLYGITSIADPCSLPSSAKVKGVGDKERLFYAPMSGLGDLFYE 149
           AGVGD+ L  +T + DPC LPS+AK KG+ DKE+LFYAPMSG+GDL Y+
Sbjct: 301 AGVGDYGLAHVTGLPDPCPLPSAAKKKGLRDKEKLFYAPMSGVGDLLYD 349


>ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1176

 Score =  209 bits (532), Expect = 3e-52
 Identities = 103/162 (63%), Positives = 122/162 (75%), Gaps = 2/162 (1%)
 Frame = +3

Query: 147  ELNDPDEVKRLEIEGFRAGTYLKLEVRDVPFASTENIDPYRPILVGGISLEEENVGCMQA 326
            ELND DE  RLEIEGFR GTYL+LE+ DVP    E  DPY PILVGGI + EENVG MQA
Sbjct: 755  ELNDLDEATRLEIEGFRTGTYLRLEIHDVPCEMVEYFDPYHPILVGGIGIGEENVGYMQA 814

Query: 327  RLKQHRWHLKLLKTREPIIVSVGWRRYQTRLVYAQEDDG--LHLIDHIPEYADCLAMFWG 500
            RLK+HRWH K+LKTR+PIIVSVGWRRYQT  +YA ED      ++ + PE+  CLAMFWG
Sbjct: 815  RLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPIYAIEDSNGRDRMLKYTPEHMHCLAMFWG 874

Query: 501  PIAPQDSGVVAVQNLAGNKAPFRVSAMGVVVESQPVAEIVKK 626
            P+AP ++GVVA QNL+ N+A FR++A  VV+E    A IVKK
Sbjct: 875  PLAPPNTGVVAFQNLSNNQATFRITATAVVLEFNHAARIVKK 916



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 33/49 (67%), Positives = 41/49 (83%)
 Frame = +3

Query: 3   AGVGDFPLYGITSIADPCSLPSSAKVKGVGDKERLFYAPMSGLGDLFYE 149
           AGVGD+ L  +T++ DPC LPS+AK KG+ DKE+LFYAPMSGLGDL Y+
Sbjct: 308 AGVGDYSLAVVTALPDPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYD 356


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