BLASTX nr result

ID: Papaver23_contig00010722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00010722
         (1207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510436.1| conserved hypothetical protein [Ricinus comm...   383   e-104
ref|XP_002300750.1| predicted protein [Populus trichocarpa] gi|1...   382   e-104
ref|XP_002281211.1| PREDICTED: protein TIC 20-I, chloroplastic [...   371   e-100
ref|XP_002307678.1| predicted protein [Populus trichocarpa] gi|1...   371   e-100
ref|NP_171986.3| translocon at the inner envelope membrane of ch...   369   1e-99

>ref|XP_002510436.1| conserved hypothetical protein [Ricinus communis]
            gi|223551137|gb|EEF52623.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 276

 Score =  383 bits (983), Expect = e-104
 Identities = 194/286 (67%), Positives = 216/286 (75%)
 Frame = -2

Query: 1044 MILNGCAMMTCGSMSMAMKHRIVTKPNASRTTFSAAYRLPTVKAVAFQKTRNSWDEQKSC 865
            MILNGC + +    ++         PN+     SA     T KA AF   RNS     + 
Sbjct: 1    MILNGCIVPSTSGYALINTRTCKPWPNS---LVSACVPRLTTKA-AFLDIRNSCTPVPNL 56

Query: 864  PMKDMLFTSGWQPLHPSTWSTTLLAGNHGSPLHTTPVSPMQRSVAHRSHMVPRASSKDVP 685
              K  L + G   L  S  ST LL+G+ G   H  P  P QR    R ++ PRAS KDVP
Sbjct: 57   ESKFWL-SRGLPFLSLSAASTPLLSGDQGGIWHAIPSFPRQR----RCYLCPRAS-KDVP 110

Query: 684  TSFRFPPMTKKPRWWWRMIACLPYLMPLHETWMYAETAYHLHPFLEDFEFMTYPFLGALG 505
             SFR+PPMTKKP+WWWR +ACLPYLMPLHETWMYAETAYHLHPFLEDFEF+TYPFLGA+G
Sbjct: 111  YSFRYPPMTKKPKWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIG 170

Query: 504  KLPTWFLMAYFFVAYLGVVRKKEWPHFFRFHVVMGMLLEIALQVMGTVSRWMPLAIYWGK 325
            +LP+WFLMAYFFVAYLGVVR+KEWPHFFRFHVVMGMLLEIALQV+GTVSRWMPLA+YWGK
Sbjct: 171  RLPSWFLMAYFFVAYLGVVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGK 230

Query: 324  VGMHVWTAIAFAFLFTVLECIRCALAGMYADVPFVCDAAYIQIPYD 187
            VGMH WTAIAFA+LFTVLECIRCALAGMYADVPF CDAAYIQIPYD
Sbjct: 231  VGMHFWTAIAFAYLFTVLECIRCALAGMYADVPFACDAAYIQIPYD 276


>ref|XP_002300750.1| predicted protein [Populus trichocarpa] gi|118482844|gb|ABK93337.1|
            unknown [Populus trichocarpa] gi|222842476|gb|EEE80023.1|
            predicted protein [Populus trichocarpa]
          Length = 272

 Score =  382 bits (982), Expect = e-104
 Identities = 192/290 (66%), Positives = 217/290 (74%), Gaps = 4/290 (1%)
 Frame = -2

Query: 1044 MILNGCAMMTCGSMSMAMKHR----IVTKPNASRTTFSAAYRLPTVKAVAFQKTRNSWDE 877
            MILNGCAM +  + S     +    I+   +   TT  AA  L +  ++       SW  
Sbjct: 1    MILNGCAMPSGSAFSSTRTCKTMPGIMVSDHVPYTTARAAL-LSSRASLERHLESKSWSS 59

Query: 876  QKSCPMKDMLFTSGWQPLHPSTWSTTLLAGNHGSPLHTTPVSPMQRSVAHRSHMVPRASS 697
            +            G+  LH S  ST LL+G++    H  P  P QR    RS+  PRAS 
Sbjct: 60   R------------GFLSLHLSAASTPLLSGDYCGFSHYIPTFPRQR----RSYSCPRAS- 102

Query: 696  KDVPTSFRFPPMTKKPRWWWRMIACLPYLMPLHETWMYAETAYHLHPFLEDFEFMTYPFL 517
            KDVP SFRFPPMTKKPRWWWR +ACLPYLMPLHETWMYAETAYHLHPFLEDFEF+TYPFL
Sbjct: 103  KDVPYSFRFPPMTKKPRWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFL 162

Query: 516  GALGKLPTWFLMAYFFVAYLGVVRKKEWPHFFRFHVVMGMLLEIALQVMGTVSRWMPLAI 337
            GA+G+LP+WFLMAYFFVAYLGVVR+KEWPHFFRFHVVMGMLLEIALQV+GTVSRWMPLA+
Sbjct: 163  GAIGRLPSWFLMAYFFVAYLGVVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAV 222

Query: 336  YWGKVGMHVWTAIAFAFLFTVLECIRCALAGMYADVPFVCDAAYIQIPYD 187
            YWGK+GMH WTA+AFA+LFTVLECIRCALAGMYADVPF CDAAYIQIPYD
Sbjct: 223  YWGKLGMHFWTAVAFAYLFTVLECIRCALAGMYADVPFACDAAYIQIPYD 272


>ref|XP_002281211.1| PREDICTED: protein TIC 20-I, chloroplastic [Vitis vinifera]
            gi|302142547|emb|CBI19750.3| unnamed protein product
            [Vitis vinifera]
          Length = 272

 Score =  371 bits (952), Expect = e-100
 Identities = 188/288 (65%), Positives = 214/288 (74%), Gaps = 2/288 (0%)
 Frame = -2

Query: 1044 MILNGCAMMTCGSMSMAMKHRIVTKPNASRTTFSAAYRLPTVKAVAFQKTRNSWDEQKSC 865
            MILNG ++MT G   M  +     KP  S   F+    LP     A    R+SW   + C
Sbjct: 1    MILNG-SVMTSGCALMDSR---ACKPVTSHQVFACFPHLPA--RTASLSIRSSW---RPC 51

Query: 864  P-MKDMLFTSGWQPL-HPSTWSTTLLAGNHGSPLHTTPVSPMQRSVAHRSHMVPRASSKD 691
              +K   F  G  PL H S  ST LL+G+ G   HT P+ P +          P  +SKD
Sbjct: 52   QELKSWSF--GGMPLSHLSAASTPLLSGDQGGLSHTLPMLPRRPRSP-----TPLRASKD 104

Query: 690  VPTSFRFPPMTKKPRWWWRMIACLPYLMPLHETWMYAETAYHLHPFLEDFEFMTYPFLGA 511
            VP SFR+PPMTKKP+WWWR +ACLPYLMPLHETWMYAETAYHLHPFLEDFEF+TYPFL  
Sbjct: 105  VPYSFRYPPMTKKPQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFVTYPFLEF 164

Query: 510  LGKLPTWFLMAYFFVAYLGVVRKKEWPHFFRFHVVMGMLLEIALQVMGTVSRWMPLAIYW 331
            +G+LP+W LMAYFF+AYLGVVRKKEWPHFFRFHVVMGMLLEIALQV+GT+SRWMPLA+YW
Sbjct: 165  IGRLPSWSLMAYFFIAYLGVVRKKEWPHFFRFHVVMGMLLEIALQVIGTISRWMPLAVYW 224

Query: 330  GKVGMHVWTAIAFAFLFTVLECIRCALAGMYADVPFVCDAAYIQIPYD 187
            GKVGMH WTA+AF +LFTVLECIRCALAGMYAD+PFVCDAAYIQIPYD
Sbjct: 225  GKVGMHFWTAVAFGYLFTVLECIRCALAGMYADIPFVCDAAYIQIPYD 272


>ref|XP_002307678.1| predicted protein [Populus trichocarpa] gi|118487446|gb|ABK95551.1|
            unknown [Populus trichocarpa] gi|222857127|gb|EEE94674.1|
            predicted protein [Populus trichocarpa]
          Length = 272

 Score =  371 bits (952), Expect = e-100
 Identities = 187/290 (64%), Positives = 212/290 (73%), Gaps = 4/290 (1%)
 Frame = -2

Query: 1044 MILNGCAMMTCGSMSMAMKHR----IVTKPNASRTTFSAAYRLPTVKAVAFQKTRNSWDE 877
            M+LN C M +    +     +    IV   +   TT  AA  L +  ++  Q    SW  
Sbjct: 1    MLLNDCTMPSGSGFTNTRACKTMPGIVVSASVPCTTARAAL-LNSRASLGRQLDSKSWSS 59

Query: 876  QKSCPMKDMLFTSGWQPLHPSTWSTTLLAGNHGSPLHTTPVSPMQRSVAHRSHMVPRASS 697
            +            G   L  S  S  LL+G++G   H  P  P QR    RS+  PRAS 
Sbjct: 60   R------------GLPSLLLSAASMPLLSGDYGRFSHNIPTYPRQR----RSYSCPRAS- 102

Query: 696  KDVPTSFRFPPMTKKPRWWWRMIACLPYLMPLHETWMYAETAYHLHPFLEDFEFMTYPFL 517
            KDVP S+RFPPMTKKP WWWR +ACLPYLMPLHETWMYAETAYHLHPFLEDFEF+TYPFL
Sbjct: 103  KDVPYSYRFPPMTKKPGWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFL 162

Query: 516  GALGKLPTWFLMAYFFVAYLGVVRKKEWPHFFRFHVVMGMLLEIALQVMGTVSRWMPLAI 337
            GA+G+LP+WFLMAYFFVAYLGVVR+KEWPHFFRFHVVMGMLLEIALQV+GTVSRWMPLA+
Sbjct: 163  GAIGRLPSWFLMAYFFVAYLGVVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAV 222

Query: 336  YWGKVGMHVWTAIAFAFLFTVLECIRCALAGMYADVPFVCDAAYIQIPYD 187
            YWGK+GMH WTA+AFA+LFTVLECIRCALAGMYADVPF CDAAYIQIPYD
Sbjct: 223  YWGKLGMHFWTAVAFAYLFTVLECIRCALAGMYADVPFACDAAYIQIPYD 272


>ref|NP_171986.3| translocon at the inner envelope membrane of chloroplasts 20
           [Arabidopsis thaliana]
           gi|75151589|sp|Q8GZ79.1|TI201_ARATH RecName:
           Full=Protein TIC 20-I, chloroplastic; AltName:
           Full=Translocon at the inner envelope membrane of
           chloroplasts 20-I; Short=AtTIC20-I; Flags: Precursor
           gi|26449432|dbj|BAC41843.1| unknown protein [Arabidopsis
           thaliana] gi|332189644|gb|AEE27765.1| translocon at the
           inner envelope membrane of chloroplasts 20 [Arabidopsis
           thaliana]
          Length = 274

 Score =  369 bits (946), Expect = 1e-99
 Identities = 181/273 (66%), Positives = 211/273 (77%), Gaps = 12/273 (4%)
 Frame = -2

Query: 969 PNASRTTFSAAYRLPTVKAVAFQK-----------TRNSWDEQKSCPMKDMLFTSGWQPL 823
           P+A     S A++  + +A A Q             +NSW    S P  ++   S   PL
Sbjct: 8   PSAHVLMSSRAFKSSSYRAAAGQTQHYLARSSLPVVKNSWGSPPS-PFNELPRVSRGVPL 66

Query: 822 -HPSTWSTTLLAGNHGSPLHTTPVSPMQRSVAHRSHMVPRASSKDVPTSFRFPPMTKKPR 646
            + S  S+ LL G  GS   T PV P++R    ++ + PRAS KDVP+SFRFPPMTKKP+
Sbjct: 67  SYLSASSSLLLNGEQGSLSGTLPVLPVRR----KTLLTPRAS-KDVPSSFRFPPMTKKPQ 121

Query: 645 WWWRMIACLPYLMPLHETWMYAETAYHLHPFLEDFEFMTYPFLGALGKLPTWFLMAYFFV 466
           WWWR +ACLPYLMPLHETWMYAETAYHLHPFLEDFEF+TYPFLGA+G+LP+WFLMAYFFV
Sbjct: 122 WWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFV 181

Query: 465 AYLGVVRKKEWPHFFRFHVVMGMLLEIALQVMGTVSRWMPLAIYWGKVGMHVWTAIAFAF 286
           AYLG+VR+KEWPHFFRFHVVMGMLLEIALQV+GTVS+WMPL +YWGK GMH WTA+AFA+
Sbjct: 182 AYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAVAFAY 241

Query: 285 LFTVLECIRCALAGMYADVPFVCDAAYIQIPYD 187
           LFTVLE IRCALAGMYAD+PFVCDAAYIQIPYD
Sbjct: 242 LFTVLESIRCALAGMYADIPFVCDAAYIQIPYD 274


Top