BLASTX nr result

ID: Papaver23_contig00010709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00010709
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P80915.1|AMP1_MACIN RecName: Full=Antimicrobial peptide 1; Sh...    79   4e-13
pdb|1C01|A Chain A, Solution Structure Of Miamp1, A Plant Antimi...    75   7e-12
ref|XP_002981870.1| hypothetical protein SELMODRAFT_115640 [Sela...    63   3e-08
gb|ADJ53037.1| antimicrobial peptide 1 [Pinus pinaster]                61   1e-07
gb|AAL05052.1|AF410952_1 antimicrobial peptide 1 [Pinus sylvestris]    61   1e-07

>sp|P80915.1|AMP1_MACIN RecName: Full=Antimicrobial peptide 1; Short=AMP1; AltName:
           Full=MiAMP1; Flags: Precursor gi|2181943|emb|CAA71842.1|
           AMP1 [Macadamia integrifolia]
          Length = 102

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = -1

Query: 433 ELSNASSLTTYSGPGGCAARFLTYXXXXXXXXXXXG-YQFVYTGQTASMYNQAGCRGVSN 257
           E+ N S+ T +SGPG C  R   Y           G Y F YTGQTA++YNQAGC GV++
Sbjct: 22  EMVNGSAFTVWSGPG-CNNRAERYSKCGCSAIHQKGGYDFSYTGQTAALYNQAGCSGVAH 80

Query: 256 FSFNANARVCRPFEWRSVFIQC 191
             F ++AR C PF W+S+FIQC
Sbjct: 81  TRFGSSARACNPFGWKSIFIQC 102


>pdb|1C01|A Chain A, Solution Structure Of Miamp1, A Plant Antimicrobial
           Protein
          Length = 76

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
 Frame = -1

Query: 418 SSLTTYSGPGGCAARFLTYXXXXXXXXXXXG-YQFVYTGQTASMYNQAGCRGVSNFSFNA 242
           S+ T +SGPG C  R   Y           G Y F YTGQTA++YNQAGC GV++  F +
Sbjct: 1   SAFTVWSGPG-CNNRAERYSKCGCSAIHQKGGYDFSYTGQTAALYNQAGCSGVAHTRFGS 59

Query: 241 NARVCRPFEWRSVFIQC 191
           +AR C PF W+S+FIQC
Sbjct: 60  SARACNPFGWKSIFIQC 76


>ref|XP_002981870.1| hypothetical protein SELMODRAFT_115640 [Selaginella moellendorffii]
           gi|300150312|gb|EFJ16963.1| hypothetical protein
           SELMODRAFT_115640 [Selaginella moellendorffii]
          Length = 84

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
 Frame = -1

Query: 427 SNASSLTTYSGPGGCAARFLTYXXXXXXXXXXXG---YQFVYTGQTASMYNQAGCRGVSN 257
           +NAS    ++GPG C  R   Y               Y F Y GQTA+ YN A CRGV++
Sbjct: 4   ANASFFDAWAGPG-CNNRLERYRACGCNNVGASQHGGYSFAYQGQTAAAYNTANCRGVAH 62

Query: 256 FSFNANARVCRPFEWRSVFIQC 191
             F+++ + C  F WRS+FIQC
Sbjct: 63  TRFSSSVQDCSGFGWRSIFIQC 84


>gb|ADJ53037.1| antimicrobial peptide 1 [Pinus pinaster]
          Length = 105

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
 Frame = -1

Query: 427 SNASSLTTYSGPG--GCAARFLTYXXXXXXXXXXXGYQFVYTGQTASMYNQAGCRGVSNF 254
           S  S  T ++GPG    AAR+              GY+FVY GQTAS YN A C+GV+  
Sbjct: 24  SEGSYFTAWAGPGCNNHAARYSKCGCSNIGNDVHGGYEFVYQGQTASAYNTANCKGVAQT 83

Query: 253 SFNANA-RVCRPFEWRSVFIQC 191
            F+ +  + C  F W+S FIQC
Sbjct: 84  RFSGSVNQACSGFGWKSFFIQC 105


>gb|AAL05052.1|AF410952_1 antimicrobial peptide 1 [Pinus sylvestris]
          Length = 105

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
 Frame = -1

Query: 427 SNASSLTTYSGPG--GCAARFLTYXXXXXXXXXXXGYQFVYTGQTASMYNQAGCRGVSNF 254
           S  S  T ++GPG    AAR+              GY+FVY GQTAS YN A C+GV+  
Sbjct: 24  SEGSYFTAWAGPGCNNHAARYSKCGCSNIGNNVHAGYEFVYQGQTASAYNTANCKGVAQT 83

Query: 253 SFNANA-RVCRPFEWRSVFIQC 191
            F+ +  + C  F W+S FIQC
Sbjct: 84  RFSGSVNQACSGFGWKSFFIQC 105


Top