BLASTX nr result

ID: Papaver23_contig00009868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00009868
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520933.1| PREDICTED: ataxin-3 homolog [Glycine max]         117   1e-24
ref|XP_003604579.1| Ataxin-3-like protein [Medicago truncatula] ...   116   2e-24
gb|AFK38244.1| unknown [Lotus japonicus]                              112   3e-23
ref|XP_002527866.1| Ataxin-3, putative [Ricinus communis] gi|223...   109   3e-22
ref|XP_002877957.1| josephin family protein [Arabidopsis lyrata ...   106   2e-21

>ref|XP_003520933.1| PREDICTED: ataxin-3 homolog [Glycine max]
          Length = 336

 Score =  117 bits (292), Expect = 1e-24
 Identities = 70/144 (48%), Positives = 85/144 (59%), Gaps = 26/144 (18%)
 Frame = -3

Query: 506 LNCPVADPAQVDPELENSFICHLQDHWFSIRKVN----------------GK*TVS---- 387
           L+ PVA+PAQ+DPELEN+FICHLQDHWF IRKVN                 K  +S    
Sbjct: 95  LDSPVAEPAQIDPELENAFICHLQDHWFCIRKVNREWYNFDSLYAAPQHLSKFYLSAYLD 154

Query: 386 -----G*SIFHVRGNFPKDCSISTSEA-RGFGKWIMPEDAQRITKSCNTSQSGTHTTRAP 225
                G SIF VRGNFPK+  IS+SEA  GFG+W+ PEDA+RITKSCN+ Q+        
Sbjct: 155 SLKGFGWSIFLVRGNFPKEFPISSSEASNGFGQWLSPEDAERITKSCNSVQAPHQRVNER 214

Query: 224 TQPIASFYQTFREKRSLSDMENDD 153
            Q    F  +  E   L DME++D
Sbjct: 215 QQNYDQFL-SHGETEMLLDMEDED 237


>ref|XP_003604579.1| Ataxin-3-like protein [Medicago truncatula]
           gi|355505634|gb|AES86776.1| Ataxin-3-like protein
           [Medicago truncatula]
          Length = 330

 Score =  116 bits (290), Expect = 2e-24
 Identities = 67/144 (46%), Positives = 83/144 (57%), Gaps = 26/144 (18%)
 Frame = -3

Query: 506 LNCPVADPAQVDPELENSFICHLQDHWFSIRKVNGK------------------------ 399
           L+ PVA+PAQ+DPELEN+FICHLQDHWF IRKVNG+                        
Sbjct: 97  LDSPVAEPAQIDPELENAFICHLQDHWFCIRKVNGEWYNFDSLYAAPQHLSKFYLAAYLD 156

Query: 398 -*TVSG*SIFHVRGNFPKDCSISTSEARGFGKWIMPEDAQRITKSCNTSQSGTHTTR-AP 225
                G SIF VRGNFP +  IS SE+ GFG+W+ PEDA+RITKSCN  Q      R   
Sbjct: 157 SLKGFGWSIFLVRGNFPTEFPIS-SESNGFGQWLSPEDAERITKSCNAVQQAPQQQRTVE 215

Query: 224 TQPIASFYQTFREKRSLSDMENDD 153
            Q  ++ + +  E    SDME++D
Sbjct: 216 RQQHSNPFLSREEAEMFSDMEDED 239


>gb|AFK38244.1| unknown [Lotus japonicus]
          Length = 345

 Score =  112 bits (280), Expect = 3e-23
 Identities = 66/144 (45%), Positives = 81/144 (56%), Gaps = 26/144 (18%)
 Frame = -3

Query: 506 LNCPVADPAQVDPELENSFICHLQDHWFSIRKVNGK------------------------ 399
           L+ PVA+PAQ+DPELEN+FICHLQDHWF IRKVNG+                        
Sbjct: 99  LDSPVAEPAQIDPELENAFICHLQDHWFCIRKVNGEWYNFDSLYAAPQHLSKFYLAAYLD 158

Query: 398 -*TVSG*SIFHVRGNFPKDCSISTSEA-RGFGKWIMPEDAQRITKSCNTSQSGTHTTRAP 225
                G SIF VRGNFPK+  IS+SEA  GFG+W+ PEDA+RI KSC++ Q         
Sbjct: 159 SLKGFGWSIFLVRGNFPKEFPISSSEASNGFGQWLSPEDAERIIKSCSSVQPPQRVNNER 218

Query: 224 TQPIASFYQTFREKRSLSDMENDD 153
            Q    F     E    S+ME++D
Sbjct: 219 QQRQDQFLSR-EEADMFSEMEDED 241


>ref|XP_002527866.1| Ataxin-3, putative [Ricinus communis] gi|223532717|gb|EEF34497.1|
           Ataxin-3, putative [Ricinus communis]
          Length = 266

 Score =  109 bits (272), Expect = 3e-22
 Identities = 57/108 (52%), Positives = 70/108 (64%), Gaps = 26/108 (24%)
 Frame = -3

Query: 506 LNCPVADPAQVDPELENSFICHLQDHWFSIRKVNGK------------------------ 399
           LN PVA+PAQ+DP+LEN+FICHL DHWF IRKVNG+                        
Sbjct: 97  LNSPVAEPAQIDPDLENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLAAYLD 156

Query: 398 -*TVSG*SIFHVRGNFPKDCSISTSEA-RGFGKWIMPEDAQRITKSCN 261
               SG SIF VRGNFPK+  I++SEA  G+G+W+ PEDA+RITKSC+
Sbjct: 157 SLKSSGWSIFLVRGNFPKEFPIASSEASNGYGQWLSPEDAERITKSCS 204


>ref|XP_002877957.1| josephin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323795|gb|EFH54216.1| josephin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 283

 Score =  106 bits (265), Expect = 2e-21
 Identities = 62/155 (40%), Positives = 86/155 (55%), Gaps = 37/155 (23%)
 Frame = -3

Query: 506 LNCPVADPAQVDPELENSFICHLQDHWFSIRKVNGK------------------------ 399
           LNCP A+PAQ+DPELE++FICHL DHWF IRKVNG+                        
Sbjct: 101 LNCPDAEPAQIDPELESAFICHLHDHWFCIRKVNGEWYNFDSLLAAPQHLSKFYLSAFLD 160

Query: 398 -*TVSG*SIFHVRGNFPKDCSISTSE--ARGFGKWIMPEDAQRITKSCNTSQSGTHT--- 237
               SG SIF V+GNFP++C +S+S   +  FG+W+ PEDA+RI KS ++S  G+     
Sbjct: 161 SLKGSGWSIFIVKGNFPQECPMSSSSEASNSFGQWLSPEDAERIIKSTSSSVRGSSARNN 220

Query: 236 -------TRAPTQPIASFYQTFREKRSLSDMENDD 153
                   + P Q ++       E ++ S+ME+DD
Sbjct: 221 RSNDNVDQQRPNQALSR-----EEVQAFSEMEDDD 250


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