BLASTX nr result

ID: Papaver23_contig00009605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00009605
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001061850.2| Os08g0428800 [Oryza sativa Japonica Group] g...    80   2e-13
ref|XP_002311516.1| high mobility group family [Populus trichoca...    74   2e-11
dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]...    74   2e-11
ref|XP_003634203.1| PREDICTED: uncharacterized protein LOC100853...    73   3e-11
ref|XP_002527784.1| Histone H1, putative [Ricinus communis] gi|2...    72   6e-11

>ref|NP_001061850.2| Os08g0428800 [Oryza sativa Japonica Group]
           gi|25553691|dbj|BAC24935.1| putative high mobility group
           I/Y (HMGI/Y protein) [Oryza sativa Japonica Group]
           gi|38175502|dbj|BAD01198.1| putative high mobility group
           I/Y (HMGI/Y protein) [Oryza sativa Japonica Group]
           gi|255678466|dbj|BAF23764.2| Os08g0428800 [Oryza sativa
           Japonica Group]
          Length = 178

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 55/176 (31%), Positives = 76/176 (43%), Gaps = 5/176 (2%)
 Frame = -3

Query: 567 LNEKTGSSKKALAKFIDSAYTNLPQSHSALLSNHLKRLKDNGVIITIKNSYXXXXXXXXX 388
           LNEK+GS+K A++KFI+  Y +LP +H++LL+ HL R+K++G +I +KN+Y         
Sbjct: 27  LNEKSGSNKSAISKFIEGKYGDLPPAHASLLTAHLARMKESGELIFLKNNY--------- 77

Query: 387 XXXXXXXXXXXXXXXXXAKRGRGRPPKTNTVVALXXXXXXXXXXXXXXXILNPNPSPNTI 208
                             KRGRGRPPK     A                   P P P   
Sbjct: 78  --------FRADAPDAPPKRGRGRPPKPRDPNA-------------------PPPPPKPS 110

Query: 207 TTIARGGTPN-----TTTIIVGGGSPNTTTAVVGGVQDRSGEAVLPAKRGRGRPPR 55
           +   RG  P      +  I    G P             +G+   P KRGRGRPP+
Sbjct: 111 SPRPRGRPPKSKDPISDAIPKSRGRPPKKAKTAPAPPPAAGDGSAPVKRGRGRPPK 166


>ref|XP_002311516.1| high mobility group family [Populus trichocarpa]
           gi|222851336|gb|EEE88883.1| high mobility group family
           [Populus trichocarpa]
          Length = 207

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 54/175 (30%), Positives = 75/175 (42%), Gaps = 3/175 (1%)
 Frame = -3

Query: 567 LNEKTGSSKKALAKFIDSAYTNLPQSHSALLSNHLKRLKDNGVIITIKNSYXXXXXXXXX 388
           LNEK GS+K +++K I+S + +LP +HS LLS+HL ++K +G ++ +KN+Y         
Sbjct: 50  LNEKEGSNKTSISKQIESTHPDLPPAHSTLLSHHLNKMKQSGQLVLVKNNY--------- 100

Query: 387 XXXXXXXXXXXXXXXXXAKRGRGRPPKTNTVV---ALXXXXXXXXXXXXXXXILNPNPSP 217
                             KRGRGRPPK         +                  P  SP
Sbjct: 101 ---------MKPDPNAPPKRGRGRPPKPKLPTPPGTVSGPPRPRGRPPKPRDPFAPVASP 151

Query: 216 NTITTIARGGTPNTTTIIVGGGSPNTTTAVVGGVQDRSGEAVLPAKRGRGRPPRS 52
              TT    G P       G    N +TAV        G     A+RGRGRPP++
Sbjct: 152 KKKTTSTGTGRPR------GRPPKNASTAVPAA--SSGGAPPSGARRGRGRPPKA 198


>dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]
           gi|1483173|dbj|BAA13133.1| high mobility group protein
           [Canavalia gladiata]
          Length = 178

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 49/171 (28%), Positives = 72/171 (42%)
 Frame = -3

Query: 567 LNEKTGSSKKALAKFIDSAYTNLPQSHSALLSNHLKRLKDNGVIITIKNSYXXXXXXXXX 388
           LNE +GS+K A++K+I+S Y  LP  H+ LL++HL ++KD+G ++ +KN+Y         
Sbjct: 26  LNEPSGSNKSAISKYIESTYGELPDGHATLLAHHLNKMKDSGELVFLKNNY--------- 76

Query: 387 XXXXXXXXXXXXXXXXXAKRGRGRPPKTNTVVALXXXXXXXXXXXXXXXILNPNPSPNTI 208
                             KRGRGRPPK    V L                 +PN  P + 
Sbjct: 77  ---------MKPDPNAPPKRGRGRPPKPK--VPLPPGTVLSPPRPRGRPPKDPNAPPKS- 124

Query: 207 TTIARGGTPNTTTIIVGGGSPNTTTAVVGGVQDRSGEAVLPAKRGRGRPPR 55
                      T +  G G P      +           +P+ R RGRPP+
Sbjct: 125 ---------PKTKVSTGSGRPRGRPKKIARSPAAVAPTPVPSGRPRGRPPK 166


>ref|XP_003634203.1| PREDICTED: uncharacterized protein LOC100853898 [Vitis vinifera]
           gi|147815426|emb|CAN74749.1| hypothetical protein
           VITISV_021497 [Vitis vinifera]
           gi|297734307|emb|CBI15554.3| unnamed protein product
           [Vitis vinifera]
          Length = 355

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 54/172 (31%), Positives = 79/172 (45%)
 Frame = -3

Query: 567 LNEKTGSSKKALAKFIDSAYTNLPQSHSALLSNHLKRLKDNGVIITIKNSYXXXXXXXXX 388
           LNE+TGSSKKA+AK+I+  + +LP SH ALL++HLKRL+ +G ++ +K+SY         
Sbjct: 55  LNERTGSSKKAIAKYIERTFGDLPPSHPALLTHHLKRLRSSGQVVMVKHSY-----MLPR 109

Query: 387 XXXXXXXXXXXXXXXXXAKRGRGRPPKTNTVVALXXXXXXXXXXXXXXXILNPNPSPNTI 208
                             KRGRGRPPK    V                      P+  ++
Sbjct: 110 SGDDAHALPLHPGPVSGPKRGRGRPPKPKIPV---------------------QPTSESV 148

Query: 207 TTIARGGTPNTTTIIVGGGSPNTTTAVVGGVQDRSGEAVLPAKRGRGRPPRS 52
             +A G          G G P  +    GGV+    +++   KR  GRPP++
Sbjct: 149 -LVAVGLVDGPVVPKRGPGRPPKS----GGVRGPRPKSLDGPKRRPGRPPKA 195


>ref|XP_002527784.1| Histone H1, putative [Ricinus communis] gi|223532819|gb|EEF34594.1|
           Histone H1, putative [Ricinus communis]
          Length = 199

 Score = 72.0 bits (175), Expect = 6e-11
 Identities = 50/174 (28%), Positives = 72/174 (41%), Gaps = 3/174 (1%)
 Frame = -3

Query: 567 LNEKTGSSKKALAKFIDSAYTNLPQSHSALLSNHLKRLKDNGVIITIKNSYXXXXXXXXX 388
           LN+K GS+K A++K +++ Y +LP +H+ LLS+HL ++K +G ++ +KN+Y         
Sbjct: 42  LNDKNGSNKSAISKQMETTYPDLPPAHTTLLSHHLNKMKQSGQLVLVKNNY--------- 92

Query: 387 XXXXXXXXXXXXXXXXXAKRGRGRPPKTNTVV---ALXXXXXXXXXXXXXXXILNPNPSP 217
                             KRGRGRPPK    +   A+                  P  SP
Sbjct: 93  ---------MKPDPNAPPKRGRGRPPKPKAPLPPGAVIAPPRPRGRPPKPRDPFAPVASP 143

Query: 216 NTITTIARGGTPNTTTIIVGGGSPNTTTAVVGGVQDRSGEAVLPAKRGRGRPPR 55
                 A  G P         G P    +        S  A    KRGRGRPP+
Sbjct: 144 KKKIATAPTGRPR--------GRPPKLPSAAPPTPSVSSAAASQVKRGRGRPPK 189


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