BLASTX nr result

ID: Papaver23_contig00009554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00009554
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...   215   5e-54
emb|CBI17233.3| unnamed protein product [Vitis vinifera]              215   5e-54
ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 ...   213   3e-53
ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 ...   211   9e-53
ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protei...   210   2e-52

>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis vinifera]
          Length = 1139

 Score =  215 bits (548), Expect = 5e-54
 Identities = 110/217 (50%), Positives = 150/217 (69%), Gaps = 8/217 (3%)
 Frame = -3

Query: 638  GGITIEEEAVGCIQVXXXXXXXXXXXXXSKDPIIVSVGWRRYQTRPMYTLKDCRGRNRVL 459
            GGI + EE VG +QV             ++DPIIVS+GWRRYQT P+Y  +DC GR+R+L
Sbjct: 766  GGIGLGEENVGYMQVRIKRHRWHKKLLKTRDPIIVSIGWRRYQTIPVYATEDCNGRHRML 825

Query: 458  NYTPKNKPCLATFWGPFAPPSTGLVVVQSLADYKAAFRTLAKASVLEFSHDTDIVKKHKR 279
             YT ++  CLA FWGP APP+TG+V VQ+L++ +A FR +A A VLEF+H   +VKK K 
Sbjct: 826  KYTKEHMHCLAMFWGPLAPPNTGVVAVQNLSNNQATFRIIATAVVLEFNHAARLVKKIKL 885

Query: 278  IGTPYSIFKKTALIKGLFRSDLEIANFKNAKIQTASGISGKINQPAEKDLIH------GL 117
            +G P  IFKKTALIK +F SDLEIA F+ A +QTASGI G++ + A+++L +      GL
Sbjct: 886  VGEPCKIFKKTALIKNMFTSDLEIARFEGAAVQTASGIRGQVKKAAKEELGNQPKKKGGL 945

Query: 116  --DGIAKCAFKRKIHLHDTVFMHVYEQVEVPRFFNPI 12
              +GIA+C F+ +I + D VF+  + +VEVP FFNP+
Sbjct: 946  PREGIARCTFEDRILMSDLVFLRAWTEVEVPCFFNPL 982


>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score =  215 bits (548), Expect = 5e-54
 Identities = 110/217 (50%), Positives = 150/217 (69%), Gaps = 8/217 (3%)
 Frame = -3

Query: 638  GGITIEEEAVGCIQVXXXXXXXXXXXXXSKDPIIVSVGWRRYQTRPMYTLKDCRGRNRVL 459
            GGI + EE VG +QV             ++DPIIVS+GWRRYQT P+Y  +DC GR+R+L
Sbjct: 932  GGIGLGEENVGYMQVRIKRHRWHKKLLKTRDPIIVSIGWRRYQTIPVYATEDCNGRHRML 991

Query: 458  NYTPKNKPCLATFWGPFAPPSTGLVVVQSLADYKAAFRTLAKASVLEFSHDTDIVKKHKR 279
             YT ++  CLA FWGP APP+TG+V VQ+L++ +A FR +A A VLEF+H   +VKK K 
Sbjct: 992  KYTKEHMHCLAMFWGPLAPPNTGVVAVQNLSNNQATFRIIATAVVLEFNHAARLVKKIKL 1051

Query: 278  IGTPYSIFKKTALIKGLFRSDLEIANFKNAKIQTASGISGKINQPAEKDLIH------GL 117
            +G P  IFKKTALIK +F SDLEIA F+ A +QTASGI G++ + A+++L +      GL
Sbjct: 1052 VGEPCKIFKKTALIKNMFTSDLEIARFEGAAVQTASGIRGQVKKAAKEELGNQPKKKGGL 1111

Query: 116  --DGIAKCAFKRKIHLHDTVFMHVYEQVEVPRFFNPI 12
              +GIA+C F+ +I + D VF+  + +VEVP FFNP+
Sbjct: 1112 PREGIARCTFEDRILMSDLVFLRAWTEVEVPCFFNPL 1148


>ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1181

 Score =  213 bits (541), Expect = 3e-53
 Identities = 107/217 (49%), Positives = 147/217 (67%), Gaps = 8/217 (3%)
 Frame = -3

Query: 638  GGITIEEEAVGCIQVXXXXXXXXXXXXXSKDPIIVSVGWRRYQTRPMYTLKDCRGRNRVL 459
            GGI I EE VG +Q              ++DPIIVSVGWRRYQT P+Y ++D  GR+R+L
Sbjct: 805  GGIGIGEENVGYMQARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPIYAIEDSNGRHRML 864

Query: 458  NYTPKNKPCLATFWGPFAPPSTGLVVVQSLADYKAAFRTLAKASVLEFSHDTDIVKKHKR 279
             YTP++  CLA FWGP APP+TG+V +Q+L++ +A FR  A A VLEF+H   IVKK K 
Sbjct: 865  KYTPEHMHCLAMFWGPLAPPNTGVVAIQNLSNNQATFRITATAVVLEFNHAARIVKKIKL 924

Query: 278  IGTPYSIFKKTALIKGLFRSDLEIANFKNAKIQTASGISGKINQPAEKDLIHGL------ 117
            +G P  IFKKTALIK +F SDLE+A F+ A I+T SGI G++ + A++++ +        
Sbjct: 925  VGYPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEEIGNQAKRKGGQ 984

Query: 116  --DGIAKCAFKRKIHLHDTVFMHVYEQVEVPRFFNPI 12
              +GIA+C F+ KI + D VF+  + QVEVP+F+NP+
Sbjct: 985  TKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPL 1021


>ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1176

 Score =  211 bits (537), Expect = 9e-53
 Identities = 107/217 (49%), Positives = 146/217 (67%), Gaps = 8/217 (3%)
 Frame = -3

Query: 638  GGITIEEEAVGCIQVXXXXXXXXXXXXXSKDPIIVSVGWRRYQTRPMYTLKDCRGRNRVL 459
            GGI I EE VG +Q              ++DPIIVSVGWRRYQT P+Y ++D  GR+R+L
Sbjct: 800  GGIGIGEENVGYMQARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPIYAIEDSNGRDRML 859

Query: 458  NYTPKNKPCLATFWGPFAPPSTGLVVVQSLADYKAAFRTLAKASVLEFSHDTDIVKKHKR 279
             YTP++  CLA FWGP APP+TG+V  Q+L++ +A FR  A A VLEF+H   IVKK K 
Sbjct: 860  KYTPEHMHCLAMFWGPLAPPNTGVVAFQNLSNNQATFRITATAVVLEFNHAARIVKKIKL 919

Query: 278  IGTPYSIFKKTALIKGLFRSDLEIANFKNAKIQTASGISGKINQPAEKDLIHGL------ 117
            +G P  IFKKTALIK +F SDLE+A F+ A I+T SGI G++ + A++++ +        
Sbjct: 920  VGYPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEEIGNQAKRKGGQ 979

Query: 116  --DGIAKCAFKRKIHLHDTVFMHVYEQVEVPRFFNPI 12
              +GIA+C F+ KI + D VF+  + QVEVP+F+NP+
Sbjct: 980  TKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPL 1016


>ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507881|gb|AES89023.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 1175

 Score =  210 bits (535), Expect = 2e-52
 Identities = 105/217 (48%), Positives = 147/217 (67%), Gaps = 8/217 (3%)
 Frame = -3

Query: 638  GGITIEEEAVGCIQVXXXXXXXXXXXXXSKDPIIVSVGWRRYQTRPMYTLKDCRGRNRVL 459
            GG+ + EE VG +Q              ++DPIIVSVGWRRYQT P+Y ++D  GR+R+L
Sbjct: 801  GGVGLGEENVGYMQARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDLNGRHRML 860

Query: 458  NYTPKNKPCLATFWGPFAPPSTGLVVVQSLADYKAAFRTLAKASVLEFSHDTDIVKKHKR 279
             YTP++  CLA FWGP APP+TG+V VQ+L++ +A FR  A A V+EF+H   IVKK K 
Sbjct: 861  KYTPEHMHCLAMFWGPLAPPNTGIVAVQTLSNNQATFRITATAVVVEFNHAARIVKKIKL 920

Query: 278  IGTPYSIFKKTALIKGLFRSDLEIANFKNAKIQTASGISGKINQPAEKDLIHG------- 120
            +G P  IFKKTALIK +F SDLE+A F+ A I+T SGI G++ + A++++ +        
Sbjct: 921  VGYPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKVAKEEIGNQPKRKGGQ 980

Query: 119  -LDGIAKCAFKRKIHLHDTVFMHVYEQVEVPRFFNPI 12
              +GIA+C F+ KI + D VF+  + QVEVP+F+NP+
Sbjct: 981  IKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPL 1017


Top