BLASTX nr result
ID: Papaver23_contig00009548
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00009548
(625 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADG27844.1| RNA helicase-like protein [Gossypium hirsutum] 281 7e-74
ref|XP_004171505.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 269 3e-70
ref|XP_004150128.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 269 3e-70
gb|ADJ68231.1| DEAD box RNA helicase [Populus alba x Populus tre... 262 3e-68
ref|XP_002326399.1| predicted protein [Populus trichocarpa] gi|2... 261 1e-67
>gb|ADG27844.1| RNA helicase-like protein [Gossypium hirsutum]
Length = 501
Score = 281 bits (719), Expect = 7e-74
Identities = 138/192 (71%), Positives = 164/192 (85%), Gaps = 1/192 (0%)
Frame = +1
Query: 52 QPTSSTSAEKEPELNIGSLKIDENKNTEKFLDEPEEGNIKAVT-GDTLYSTAATFEDLKL 228
+P++ + + PEL + +LKIDE+K KFLDEPE+ NIKAVT G+T Y++A TFE+L L
Sbjct: 44 EPSALSEDKGAPELGVENLKIDESKKINKFLDEPEDSNIKAVTAGETPYTSAFTFEELNL 103
Query: 229 SEEILKGLYVDMKFTRPSKIQSVSLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDV 408
S E+LKGLYV+MKF +PSKIQ++SLPMILTPP+ DLIAQAHNGSGKTTCF LGMLSRVD
Sbjct: 104 SPELLKGLYVEMKFEKPSKIQAISLPMILTPPHLDLIAQAHNGSGKTTCFTLGMLSRVDP 163
Query: 409 KLKAPQALCICPTRELAIQNIEVLNKMGKYTGITSFCAIPVDRARDIPINKRSPITDQIV 588
LKAPQALCICPTRELAIQN+EVL KMGK+TGITS CAIP+D + IPINKR+PI Q+V
Sbjct: 164 NLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAIPMDSSNYIPINKRAPIIAQVV 223
Query: 589 VGTPGTIKKWMS 624
+GTPGTIKKWMS
Sbjct: 224 IGTPGTIKKWMS 235
>ref|XP_004171505.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Cucumis
sativus]
Length = 508
Score = 269 bits (688), Expect = 3e-70
Identities = 141/207 (68%), Positives = 162/207 (78%), Gaps = 1/207 (0%)
Frame = +1
Query: 7 KRAWXXXXXXXXXXXQPTSSTSAEKEPELNIGSLKIDENKNTEKFLDEPEEGNIKAVT-G 183
KRAW +SS +E + SLKI ++ N L+EP + NI AVT G
Sbjct: 37 KRAWGDEEDDDVVESGDSSSAPSEY-----LESLKIQDDTN----LEEPIDSNITAVTTG 87
Query: 184 DTLYSTAATFEDLKLSEEILKGLYVDMKFTRPSKIQSVSLPMILTPPYKDLIAQAHNGSG 363
DT YS+A+TFEDL LS+E+LKGLYV+MKF +PSKIQ++SLPMILTPPYKDLIAQAHNGSG
Sbjct: 88 DTPYSSASTFEDLNLSKELLKGLYVEMKFHKPSKIQAISLPMILTPPYKDLIAQAHNGSG 147
Query: 364 KTTCFVLGMLSRVDVKLKAPQALCICPTRELAIQNIEVLNKMGKYTGITSFCAIPVDRAR 543
KTTCFVLGMLSRVDV LKAPQA CICPTRELA+QNIEVL KMGKYTGITS CA+P D A
Sbjct: 148 KTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSAN 207
Query: 544 DIPINKRSPITDQIVVGTPGTIKKWMS 624
IP++KR PIT Q+V+GTPGTIKKWMS
Sbjct: 208 YIPMSKRPPITAQVVIGTPGTIKKWMS 234
>ref|XP_004150128.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Cucumis
sativus]
Length = 508
Score = 269 bits (688), Expect = 3e-70
Identities = 141/207 (68%), Positives = 162/207 (78%), Gaps = 1/207 (0%)
Frame = +1
Query: 7 KRAWXXXXXXXXXXXQPTSSTSAEKEPELNIGSLKIDENKNTEKFLDEPEEGNIKAVT-G 183
KRAW +SS +E + SLKI ++ N L+EP + NI AVT G
Sbjct: 37 KRAWGDEEDDDVVESGDSSSAPSEY-----LESLKIQDDTN----LEEPIDSNITAVTTG 87
Query: 184 DTLYSTAATFEDLKLSEEILKGLYVDMKFTRPSKIQSVSLPMILTPPYKDLIAQAHNGSG 363
DT YS+A+TFEDL LS+E+LKGLYV+MKF +PSKIQ++SLPMILTPPYKDLIAQAHNGSG
Sbjct: 88 DTPYSSASTFEDLNLSKELLKGLYVEMKFHKPSKIQAISLPMILTPPYKDLIAQAHNGSG 147
Query: 364 KTTCFVLGMLSRVDVKLKAPQALCICPTRELAIQNIEVLNKMGKYTGITSFCAIPVDRAR 543
KTTCFVLGMLSRVDV LKAPQA CICPTRELA+QNIEVL KMGKYTGITS CA+P D A
Sbjct: 148 KTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSAN 207
Query: 544 DIPINKRSPITDQIVVGTPGTIKKWMS 624
IP++KR PIT Q+V+GTPGTIKKWMS
Sbjct: 208 YIPMSKRPPITAQVVIGTPGTIKKWMS 234
>gb|ADJ68231.1| DEAD box RNA helicase [Populus alba x Populus tremula var.
glandulosa]
Length = 492
Score = 262 bits (670), Expect = 3e-68
Identities = 134/209 (64%), Positives = 162/209 (77%), Gaps = 1/209 (0%)
Frame = +1
Query: 1 EVKRAWXXXXXXXXXXXQPTSSTSAEKEPELNIGSLKIDENKNTEKFLDEPEEGNIKAVT 180
E KR W QP S+T + ELN+ +L IDEN KFLDEPE+ I+AVT
Sbjct: 22 ETKRLWSDEVDDEEV--QP-SATEEKAVSELNVDALAIDENTKVNKFLDEPEDSRIQAVT 78
Query: 181 -GDTLYSTAATFEDLKLSEEILKGLYVDMKFTRPSKIQSVSLPMILTPPYKDLIAQAHNG 357
GDT Y++A+TFEDL LS E+LKGLYV+MKF +PSKIQ++SLPMI+TPPYKDLIAQAHNG
Sbjct: 79 TGDTPYTSASTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMIMTPPYKDLIAQAHNG 138
Query: 358 SGKTTCFVLGMLSRVDVKLKAPQALCICPTRELAIQNIEVLNKMGKYTGITSFCAIPVDR 537
SGKTTCFVLGMLSRVD +L+ PQALCICPTREL+IQN+EVL KMGKYTGI+S CA+P++
Sbjct: 139 SGKTTCFVLGMLSRVDPQLQRPQALCICPTRELSIQNMEVLRKMGKYTGISSECAVPIES 198
Query: 538 ARDIPINKRSPITDQIVVGTPGTIKKWMS 624
+ R PI+ Q+V+GTPGTIK+ MS
Sbjct: 199 RNNDRSKSRPPISAQVVIGTPGTIKRLMS 227
>ref|XP_002326399.1| predicted protein [Populus trichocarpa] gi|222833592|gb|EEE72069.1|
predicted protein [Populus trichocarpa]
Length = 492
Score = 261 bits (666), Expect = 1e-67
Identities = 134/209 (64%), Positives = 162/209 (77%), Gaps = 1/209 (0%)
Frame = +1
Query: 1 EVKRAWXXXXXXXXXXXQPTSSTSAEKEPELNIGSLKIDENKNTEKFLDEPEEGNIKAVT 180
E KR W QP S+T + ELN+ +L IDEN KFLDEPE+ I+AVT
Sbjct: 22 ETKRLWSDEVDDEEV--QP-SATEEKAVLELNVDALAIDENTKVNKFLDEPEDSRIQAVT 78
Query: 181 -GDTLYSTAATFEDLKLSEEILKGLYVDMKFTRPSKIQSVSLPMILTPPYKDLIAQAHNG 357
GDT Y++A+TFEDL LS E+LKGLYV+MKF +PSKIQ++SLPMI+TPPYKDLIAQAHNG
Sbjct: 79 TGDTPYTSASTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMIMTPPYKDLIAQAHNG 138
Query: 358 SGKTTCFVLGMLSRVDVKLKAPQALCICPTRELAIQNIEVLNKMGKYTGITSFCAIPVDR 537
SGKTTCFVLGMLSRVD K ++PQALCICPTREL+IQN+EVL KMGKYTGI+S CA+P++
Sbjct: 139 SGKTTCFVLGMLSRVDPKQQSPQALCICPTRELSIQNMEVLQKMGKYTGISSECAVPIES 198
Query: 538 ARDIPINKRSPITDQIVVGTPGTIKKWMS 624
+ R PI+ Q+V+GTPGTIK+ MS
Sbjct: 199 RNNDRSRYRPPISAQVVIGTPGTIKRLMS 227