BLASTX nr result

ID: Papaver23_contig00009536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00009536
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43072.1| unknown [Lotus japonicus]                               45   1e-05
gb|AFK40850.1| unknown [Medicago truncatula]                           45   1e-05
gb|ACJ86193.1| unknown [Medicago truncatula]                           45   1e-05
ref|XP_003590400.1| 60S ribosomal protein L24 [Medicago truncatu...    45   1e-05

>gb|AFK43072.1| unknown [Lotus japonicus]
          Length = 164

 Score = 44.7 bits (104), Expect(2) = 1e-05
 Identities = 22/37 (59%), Positives = 26/37 (70%)
 Frame = +3

Query: 300 KTLLPEAVKKRHPATKKPYSRSIIGATSGISQRAACE 410
           K +  EAVKKR  ATKKPYSRSI+GAT  + Q+   E
Sbjct: 63  KDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTE 99



 Score = 30.4 bits (67), Expect(2) = 1e-05
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +2

Query: 170 GRGIGFTRSNSQVFLFV 220
           GRGI F RS+SQVFLFV
Sbjct: 18  GRGIRFIRSDSQVFLFV 34


>gb|AFK40850.1| unknown [Medicago truncatula]
          Length = 163

 Score = 44.7 bits (104), Expect(2) = 1e-05
 Identities = 22/37 (59%), Positives = 26/37 (70%)
 Frame = +3

Query: 300 KTLLPEAVKKRHPATKKPYSRSIIGATSGISQRAACE 410
           K +  EAVKKR  ATKKPYSRSI+GAT  + Q+   E
Sbjct: 63  KDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTE 99



 Score = 30.4 bits (67), Expect(2) = 1e-05
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +2

Query: 170 GRGIGFTRSNSQVFLFV 220
           GRGI F RS+SQVFLFV
Sbjct: 18  GRGIRFIRSDSQVFLFV 34


>gb|ACJ86193.1| unknown [Medicago truncatula]
          Length = 163

 Score = 44.7 bits (104), Expect(2) = 1e-05
 Identities = 22/37 (59%), Positives = 26/37 (70%)
 Frame = +3

Query: 300 KTLLPEAVKKRHPATKKPYSRSIIGATSGISQRAACE 410
           K +  EAVKKR  ATKKPYSRSI+GAT  + Q+   E
Sbjct: 63  KDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTE 99



 Score = 30.4 bits (67), Expect(2) = 1e-05
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +2

Query: 170 GRGIGFTRSNSQVFLFV 220
           GRGI F RS+SQVFLFV
Sbjct: 18  GRGIRFIRSDSQVFLFV 34


>ref|XP_003590400.1| 60S ribosomal protein L24 [Medicago truncatula]
           gi|92870918|gb|ABE80118.1| Ribosomal protein L24E
           [Medicago truncatula] gi|355479448|gb|AES60651.1| 60S
           ribosomal protein L24 [Medicago truncatula]
           gi|388498714|gb|AFK37423.1| unknown [Medicago
           truncatula]
          Length = 163

 Score = 44.7 bits (104), Expect(2) = 1e-05
 Identities = 22/37 (59%), Positives = 26/37 (70%)
 Frame = +3

Query: 300 KTLLPEAVKKRHPATKKPYSRSIIGATSGISQRAACE 410
           K +  EAVKKR  ATKKPYSRSI+GAT  + Q+   E
Sbjct: 63  KDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSE 99



 Score = 30.4 bits (67), Expect(2) = 1e-05
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +2

Query: 170 GRGIGFTRSNSQVFLFV 220
           GRGI F RS+SQVFLFV
Sbjct: 18  GRGIRFIRSDSQVFLFV 34


Top