BLASTX nr result

ID: Papaver23_contig00009506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00009506
         (830 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex...   127   5e-37
ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [...   127   5e-37
ref|XP_002330007.1| global transcription factor group [Populus t...   127   6e-37
ref|XP_003600629.1| FACT complex subunit SPT16 [Medicago truncat...   123   5e-36
ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [...   124   7e-36

>ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SPT16-like
            [Cucumis sativus]
          Length = 1073

 Score =  127 bits (318), Expect(2) = 5e-37
 Identities = 79/204 (38%), Positives = 113/204 (55%), Gaps = 14/204 (6%)
 Frame = -3

Query: 825  GRQGKTVTGTLEVHANGFRYKNYGIPFELDIMFHNVNYAFFQDGDKKMAPLCHLHLHKAI 646
            G +G+ + GTLE H NGFRY        +DIMF NV +AFFQ  + +M  L H HLH  I
Sbjct: 697  GGRGRKLPGTLEAHLNGFRYATTRSEERVDIMFGNVKHAFFQPAENEMITLLHFHLHNHI 756

Query: 645  MVGTEMTKDIQFRMVEGRNMRRLVG-------DSDEFKKENQKQKDNSEVMRDFLSRVES 487
            MVG + TKD+QF  VE  ++ + +G       D DE ++E +++   +++  DF S V  
Sbjct: 757  MVGNKKTKDVQF-YVEVMDVVQTIGGGKRSAYDPDEIEEEQRERDRKNKINMDFQSFVNR 815

Query: 486  I--CLRSNSFGFAEVE-----KKYGFYGEMILKEDLTLPATFVFMFTCLVQLEHLPFAVV 328
            +        FG  ++E     ++ GF+G         +P +     TCLV+L   PF VV
Sbjct: 816  VNDLWGQPQFGGLDLEFDQPLRELGFHGVPYKSSAFIVPTS-----TCLVELIETPFLVV 870

Query: 327  TLSEIEIVNLVHLGSGKEMFNMTI 256
            TL EIEIVNL  +G G++ F+MTI
Sbjct: 871  TLGEIEIVNLERVGFGQKNFDMTI 894



 Score = 54.3 bits (129), Expect(2) = 5e-37
 Identities = 26/42 (61%), Positives = 34/42 (80%)
 Frame = -2

Query: 160  NMTIVFKELKRDVIQINSISSTELINIKETLDASVVKYYESQ 35
            +MTIVFK+ KRDV++I+SI ST L  IKE LD + +KYYES+
Sbjct: 891  DMTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESK 932


>ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [Cucumis sativus]
          Length = 1073

 Score =  127 bits (318), Expect(2) = 5e-37
 Identities = 79/204 (38%), Positives = 113/204 (55%), Gaps = 14/204 (6%)
 Frame = -3

Query: 825  GRQGKTVTGTLEVHANGFRYKNYGIPFELDIMFHNVNYAFFQDGDKKMAPLCHLHLHKAI 646
            G +G+ + GTLE H NGFRY        +DIMF NV +AFFQ  + +M  L H HLH  I
Sbjct: 697  GGRGRKLPGTLEAHLNGFRYATTRSEERVDIMFGNVKHAFFQPAENEMITLLHFHLHNHI 756

Query: 645  MVGTEMTKDIQFRMVEGRNMRRLVG-------DSDEFKKENQKQKDNSEVMRDFLSRVES 487
            MVG + TKD+QF  VE  ++ + +G       D DE ++E +++   +++  DF S V  
Sbjct: 757  MVGNKKTKDVQF-YVEVMDVVQTIGGGKRSAYDPDEIEEEQRERDRKNKINMDFQSFVNR 815

Query: 486  I--CLRSNSFGFAEVE-----KKYGFYGEMILKEDLTLPATFVFMFTCLVQLEHLPFAVV 328
            +        FG  ++E     ++ GF+G         +P +     TCLV+L   PF VV
Sbjct: 816  VNDLWGQPQFGGLDLEFDQPLRELGFHGVPYKSSAFIVPTS-----TCLVELIETPFLVV 870

Query: 327  TLSEIEIVNLVHLGSGKEMFNMTI 256
            TL EIEIVNL  +G G++ F+MTI
Sbjct: 871  TLGEIEIVNLERVGFGQKNFDMTI 894



 Score = 54.3 bits (129), Expect(2) = 5e-37
 Identities = 26/42 (61%), Positives = 34/42 (80%)
 Frame = -2

Query: 160  NMTIVFKELKRDVIQINSISSTELINIKETLDASVVKYYESQ 35
            +MTIVFK+ KRDV++I+SI ST L  IKE LD + +KYYES+
Sbjct: 891  DMTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESK 932


>ref|XP_002330007.1| global transcription factor group [Populus trichocarpa]
            gi|222871432|gb|EEF08563.1| global transcription factor
            group [Populus trichocarpa]
          Length = 1065

 Score =  127 bits (318), Expect(2) = 6e-37
 Identities = 77/204 (37%), Positives = 117/204 (57%), Gaps = 14/204 (6%)
 Frame = -3

Query: 825  GRQGKTVTGTLEVHANGFRYKNYGIPFELDIMFHNVNYAFFQDGDKKMAPLCHLHLHKAI 646
            G +G+ + G+LE H NGFRY        +DIMF N+ +AFFQ  +K+M  L H HLH  I
Sbjct: 687  GGRGRKLPGSLEAHVNGFRYSTSRAEERVDIMFANIKHAFFQPAEKEMITLLHFHLHNHI 746

Query: 645  MVGTEMTKDIQFRMVEGRNMRRLVG-------DSDEFKKENQKQKDNSEVMRD---FLSR 496
            MVG + TKD+QF  VE  ++ + +G       D DE ++E ++++  +++  D   F++R
Sbjct: 747  MVGNKKTKDVQF-YVEVMDVVQTLGGGKRSAYDPDEIEEEQRERERKNKINMDFQSFVNR 805

Query: 495  VESICLRSNSFG----FAEVEKKYGFYGEMILKEDLTLPATFVFMFTCLVQLEHLPFAVV 328
            V  +  +    G    F +  ++ GF+G         +P +     +CLV+L   PF VV
Sbjct: 806  VNDLWAQPQFSGLDLEFDQPLRELGFHGVPHKVTSFIVPTS-----SCLVELVETPFLVV 860

Query: 327  TLSEIEIVNLVHLGSGKEMFNMTI 256
            TLSEIEIVNL  +G G++ F+MTI
Sbjct: 861  TLSEIEIVNLERVGLGQKNFDMTI 884



 Score = 53.9 bits (128), Expect(2) = 6e-37
 Identities = 26/42 (61%), Positives = 34/42 (80%)
 Frame = -2

Query: 160  NMTIVFKELKRDVIQINSISSTELINIKETLDASVVKYYESQ 35
            +MTIVFK+ KRDV++I+SI ST L  IKE LD + +KYYES+
Sbjct: 881  DMTIVFKDFKRDVLRIDSIPSTALDGIKEWLDTTDIKYYESR 922


>ref|XP_003600629.1| FACT complex subunit SPT16 [Medicago truncatula]
            gi|355489677|gb|AES70880.1| FACT complex subunit SPT16
            [Medicago truncatula]
          Length = 1066

 Score =  123 bits (309), Expect(2) = 5e-36
 Identities = 77/204 (37%), Positives = 114/204 (55%), Gaps = 14/204 (6%)
 Frame = -3

Query: 825  GRQGKTVTGTLEVHANGFRYKNYGIPFELDIMFHNVNYAFFQDGDKKMAPLCHLHLHKAI 646
            G +G+ + GTLE H NGFRY        +D+MF N+ +AFFQ  + +M  L H HLH  I
Sbjct: 689  GGRGRKIPGTLEAHVNGFRYSTTRSDERVDVMFANIKHAFFQPAENEMITLLHFHLHNHI 748

Query: 645  MVGTEMTKDIQFRMVEGRNMRRLVG-------DSDEFKKENQKQKDNSEV---MRDFLSR 496
            MVG + TKD+QF  VE  +M + VG       D DE ++E ++++  +++    + F++R
Sbjct: 749  MVGNKKTKDVQF-YVEVMDMVQNVGGGKRSAYDPDELEEEQRERERKNKINVEFQSFVNR 807

Query: 495  VESICLRSNSFG----FAEVEKKYGFYGEMILKEDLTLPATFVFMFTCLVQLEHLPFAVV 328
            V  +  +    G    F +  ++ GF G         +P +      CLV+L   PF VV
Sbjct: 808  VNDLWGQPQFNGLDLEFDQPLRELGFPGVPHKSSVFIVPTS-----ACLVELIETPFLVV 862

Query: 327  TLSEIEIVNLVHLGSGKEMFNMTI 256
            TLSEIEIVNL  +G G++ F+MTI
Sbjct: 863  TLSEIEIVNLERVGLGQKNFDMTI 886



 Score = 54.3 bits (129), Expect(2) = 5e-36
 Identities = 26/42 (61%), Positives = 34/42 (80%)
 Frame = -2

Query: 160  NMTIVFKELKRDVIQINSISSTELINIKETLDASVVKYYESQ 35
            +MTIVFK+ KRDV++I+SI ST L  IKE LD + +KYYES+
Sbjct: 883  DMTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESR 924


>ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1083

 Score =  124 bits (310), Expect(2) = 7e-36
 Identities = 76/204 (37%), Positives = 117/204 (57%), Gaps = 14/204 (6%)
 Frame = -3

Query: 825  GRQGKTVTGTLEVHANGFRYKNYGIPFELDIMFHNVNYAFFQDGDKKMAPLCHLHLHKAI 646
            G +G+ ++GTLE H NGFRY        +DIM+ N+ +AFFQ  + +M  L H HLH  I
Sbjct: 686  GGRGRKLSGTLEAHVNGFRYSTSRPDERVDIMYGNIKHAFFQPVENEMITLIHFHLHNHI 745

Query: 645  MVGTEMTKDIQFRMVEGRNMRRLVG-------DSDEFKKENQKQKDNSEVMRD---FLSR 496
            MVGT+ TKD+QF  VE  ++ + +G       D DE ++E +++   ++V  D   F++R
Sbjct: 746  MVGTKKTKDVQF-YVEVMDVVQTLGSGKRSAYDPDEIEEEQRERDRKNKVNMDFQSFVNR 804

Query: 495  VESICLRSNSFG----FAEVEKKYGFYGEMILKEDLTLPATFVFMFTCLVQLEHLPFAVV 328
            V  +  +    G    F +  ++ GF+G         +P +     +CLV+L   PF V+
Sbjct: 805  VNDLWGQPQFSGLDLEFDQPLRELGFHGVPYKSSAFIVPTS-----SCLVELIETPFLVI 859

Query: 327  TLSEIEIVNLVHLGSGKEMFNMTI 256
            TL+EIEIVNL  +G G++ F+MTI
Sbjct: 860  TLAEIEIVNLERVGLGQKNFDMTI 883



 Score = 53.5 bits (127), Expect(2) = 7e-36
 Identities = 25/42 (59%), Positives = 34/42 (80%)
 Frame = -2

Query: 160  NMTIVFKELKRDVIQINSISSTELINIKETLDASVVKYYESQ 35
            +MTIVFK+ KRDV++I+SI ST +  IKE LD + +KYYES+
Sbjct: 880  DMTIVFKDFKRDVLRIDSIPSTSIDGIKEWLDTTDIKYYESR 921


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