BLASTX nr result

ID: Papaver23_contig00009413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00009413
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284134.1| PREDICTED: ruBisCO large subunit-binding pro...   153   2e-35
ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding pro...   151   6e-35
ref|XP_002297617.1| predicted protein [Populus trichocarpa] gi|1...   150   8e-35
ref|XP_003557154.1| PREDICTED: chaperonin 60 subunit beta 1, chl...   149   2e-34
ref|XP_002303983.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34

>ref|XP_002284134.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic [Vitis vinifera]
           gi|297743227|emb|CBI36094.3| unnamed protein product
           [Vitis vinifera]
          Length = 609

 Score =  153 bits (386), Expect = 2e-35
 Identities = 86/123 (69%), Positives = 97/123 (78%), Gaps = 8/123 (6%)
 Frame = +3

Query: 102 MASTLTTMSSVGSVAATCSRATTDKK-------LSSSSQISTALFRGKGQNVVLQRRCSS 260
           MAS+  TMSS+G   ++ S  T DKK       LSS + IS   F G+ Q++VLQ+RCS 
Sbjct: 1   MASSFATMSSIGYFTSSSSH-TMDKKFLGSSRRLSSFASISANSFEGRKQSMVLQKRCSP 59

Query: 261 KIRA-AKELYFNKDGSAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVT 437
           K+RA AKELYFNKDGSAIKKLQ GVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVT
Sbjct: 60  KVRAMAKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVT 119

Query: 438 VAK 446
           VA+
Sbjct: 120 VAR 122


>ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic [Vitis vinifera]
           gi|297746501|emb|CBI16557.3| unnamed protein product
           [Vitis vinifera]
          Length = 608

 Score =  151 bits (381), Expect = 6e-35
 Identities = 88/122 (72%), Positives = 98/122 (80%), Gaps = 7/122 (5%)
 Frame = +3

Query: 102 MASTLTTMSSVGSVAATCSR------ATTDKKLSSSSQISTALFRGKGQNVVLQRRCSSK 263
           MAS  TTMSSVGS+AA   R      AT+  +LSS + IS++ F G+ QNVVL+R  S +
Sbjct: 1   MASAFTTMSSVGSLAAPGGRGMDKKLATSSDRLSSFASISSSSF-GRRQNVVLRRTRSPR 59

Query: 264 IRA-AKELYFNKDGSAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTV 440
           I A AK+LYFNKDGSAIKKLQ GVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTV
Sbjct: 60  INAMAKDLYFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTV 119

Query: 441 AK 446
           AK
Sbjct: 120 AK 121


>ref|XP_002297617.1| predicted protein [Populus trichocarpa] gi|118486341|gb|ABK95011.1|
           unknown [Populus trichocarpa]
           gi|222844875|gb|EEE82422.1| predicted protein [Populus
           trichocarpa]
          Length = 607

 Score =  150 bits (380), Expect = 8e-35
 Identities = 86/121 (71%), Positives = 95/121 (78%), Gaps = 6/121 (4%)
 Frame = +3

Query: 102 MASTLTTMSSVGSVAATCSRATTDK------KLSSSSQISTALFRGKGQNVVLQRRCSSK 263
           MAST T MSS G++AA  +RA   K      KLSS + IS + F G+ QNVVL R  S K
Sbjct: 1   MASTFTAMSSAGTLAAPNARALDKKFAFSSNKLSSFASISASRF-GRPQNVVLPRSRSLK 59

Query: 264 IRAAKELYFNKDGSAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA 443
           + AAKEL+FNKDGSAI+KLQ GVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA
Sbjct: 60  VNAAKELHFNKDGSAIRKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA 119

Query: 444 K 446
           K
Sbjct: 120 K 120


>ref|XP_003557154.1| PREDICTED: chaperonin 60 subunit beta 1, chloroplastic-like
           [Brachypodium distachyon]
          Length = 599

 Score =  149 bits (377), Expect = 2e-34
 Identities = 79/115 (68%), Positives = 94/115 (81%)
 Frame = +3

Query: 102 MASTLTTMSSVGSVAATCSRATTDKKLSSSSQISTALFRGKGQNVVLQRRCSSKIRAAKE 281
           MASTL+  S+VG +A   +   +DKK SS S +S+     + +NV LQR+C+ +++AAKE
Sbjct: 1   MASTLSATSTVGLMATGIA---SDKKSSSLSSVSSISLASRPRNVRLQRKCNFRVKAAKE 57

Query: 282 LYFNKDGSAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAK 446
           LYFNKDGSA KKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA+
Sbjct: 58  LYFNKDGSATKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAR 112


>ref|XP_002303983.1| predicted protein [Populus trichocarpa] gi|222841415|gb|EEE78962.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score =  149 bits (377), Expect = 2e-34
 Identities = 86/121 (71%), Positives = 93/121 (76%), Gaps = 6/121 (4%)
 Frame = +3

Query: 102 MASTLTTMSSVGSVAATCSRATTDK------KLSSSSQISTALFRGKGQNVVLQRRCSSK 263
           MAST T MSSVG++AA   R    K      KLSS + IS + F G+ QNVVL R    K
Sbjct: 1   MASTFTAMSSVGTLAAPNGRVMDKKFVFSSNKLSSFASISASRF-GRPQNVVLPRSRPLK 59

Query: 264 IRAAKELYFNKDGSAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA 443
           + AAKEL+FNKDGSAIKKLQ GVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA
Sbjct: 60  VNAAKELHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA 119

Query: 444 K 446
           K
Sbjct: 120 K 120


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