BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00009396
         (1405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   591   e-166
ref|XP_002325882.1| predicted protein [Populus trichocarpa] gi|2...   585   e-165
ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-lik...   580   e-163
emb|CBI26421.3| unnamed protein product [Vitis vinifera]              580   e-163
ref|XP_002319237.1| predicted protein [Populus trichocarpa] gi|2...   571   e-160

>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 508

 Score =  591 bits (1523), Expect = e-166
 Identities = 302/392 (77%), Positives = 343/392 (87%), Gaps = 2/392 (0%)
 Frame = -1

Query: 1405 SMLEKQWNLSFERKRTVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLMVLRRK- 1229
            SMLEKQWNLSFER  +   P  +S K I V  SG+SARQRRI+ R KN   +   ++   
Sbjct: 117  SMLEKQWNLSFERTDSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQANV 176

Query: 1228 -KQIGSIVSPELLQNKLQGYVKGVVSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLG 1052
             KQ+ S VSPELLQN+L+GYVKGVVSEELL+H EVV LS  IKAGLSLEDHK+RLKERLG
Sbjct: 177  FKQLKSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERLG 236

Query: 1051 YEPSDEQLATSMRIPRVELQAVLMECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQ 872
             +PSDEQ+ATS++I R ELQ+  + CSLAREKLAMSNVRLVMSIAQ+YD+MGAE+ADLVQ
Sbjct: 237  CDPSDEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQ 296

Query: 871  GGLIGLLRGIEKFDSTKGFKISTYVYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNA 692
            GGLIGLLRGIEKFDS+KGF+ISTYVYWWIRQGVSRAL+ENSRTLRLP+HLHERL LIRNA
Sbjct: 297  GGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNA 356

Query: 691  KIRLEENGITPSVDRIAECLNMSKKKITNATEAVSKIFSLDREAFPSINGLPGETLHSYI 512
            KIRLEE G+TPS+DRIAE LN+S+KK+ NATEAVSK+FSLDREAFPS+NGLPGET HSYI
Sbjct: 357  KIRLEEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYI 416

Query: 511  ADTRLENNPWHGVDEWSLQEEVNNLISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGL 332
            AD  LENNPWHGVD+W+L++EVN LI+ TL  REQ+IIRLYYGLD E LTWEDIS+RIGL
Sbjct: 417  ADNCLENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRIGL 476

Query: 331  SRERVRQVGLVALEKLKNAARKRKLEAMLVKH 236
            SRERVRQVGLVALEKLK+AARK+KLEAMLVKH
Sbjct: 477  SRERVRQVGLVALEKLKHAARKKKLEAMLVKH 508


>ref|XP_002325882.1| predicted protein [Populus trichocarpa] gi|222862757|gb|EEF00264.1|
            predicted protein [Populus trichocarpa]
          Length = 509

 Score =  585 bits (1508), Expect = e-165
 Identities = 294/392 (75%), Positives = 343/392 (87%), Gaps = 2/392 (0%)
 Frame = -1

Query: 1405 SMLEKQWNLSFERKRTVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLMVLRRK- 1229
            SMLEKQWNLSFER  +     +++NK I V  SG+SARQRR++ R KN   +  + +   
Sbjct: 118  SMLEKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSD 177

Query: 1228 -KQIGSIVSPELLQNKLQGYVKGVVSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLG 1052
             K + S+ SP+LLQN+L+GYVKGVVS+E+L HTEVV LS  I+AGLS EDHK+RLKERLG
Sbjct: 178  FKFLRSVSSPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKERLG 237

Query: 1051 YEPSDEQLATSMRIPRVELQAVLMECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQ 872
             EPSDEQ+A S+RI R +LQ+ L++CSLAREKLAMSNVRLVMSIAQKYD+MGAE+ADLVQ
Sbjct: 238  CEPSDEQIADSLRISRADLQSKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLVQ 297

Query: 871  GGLIGLLRGIEKFDSTKGFKISTYVYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNA 692
            GGLIGLLRGIEKFDS+KGFKISTYVYWWIRQGVSRAL++NSRTLRLP+HLHERL LIRNA
Sbjct: 298  GGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRNA 357

Query: 691  KIRLEENGITPSVDRIAECLNMSKKKITNATEAVSKIFSLDREAFPSINGLPGETLHSYI 512
            KIRLEE G+TPS+DRIAE LNMS++K+ NATEA+SK+FSLDREAFPS+NGLPGET HSYI
Sbjct: 358  KIRLEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYI 417

Query: 511  ADTRLENNPWHGVDEWSLQEEVNNLISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGL 332
            AD R ENNPWHGVDEW+L+EEVN LI +TL  RE++IIRLY+GLD+ECLTWEDIS+R+GL
Sbjct: 418  ADNRPENNPWHGVDEWALKEEVNKLIDSTLQEREKEIIRLYHGLDQECLTWEDISKRMGL 477

Query: 331  SRERVRQVGLVALEKLKNAARKRKLEAMLVKH 236
            SRERVRQVGLVALEKLK+AARKR  EAMLVKH
Sbjct: 478  SRERVRQVGLVALEKLKHAARKRNTEAMLVKH 509


>ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-like isoform 2 [Vitis
            vinifera]
          Length = 497

 Score =  580 bits (1495), Expect = e-163
 Identities = 300/393 (76%), Positives = 341/393 (86%), Gaps = 3/393 (0%)
 Frame = -1

Query: 1405 SMLEKQWNLSFERKRTVV---VPGEESNKNIEVARSGISARQRRISTRNKNHVSNLMVLR 1235
            SMLEKQWNLSFE +       +  +   K  EV  SG SARQRRIS R +     +M  +
Sbjct: 113  SMLEKQWNLSFEEEEEEEEEDMGKKARQKRREVTCSGTSARQRRISGRKR-----VMNEK 167

Query: 1234 RKKQIGSIVSPELLQNKLQGYVKGVVSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERL 1055
             K ++ + +  E   N+L+GYVKGVVSEELLTH +VV LS KIKAGL LEDHK+RLKER+
Sbjct: 168  SKSRVRAALGVE---NRLKGYVKGVVSEELLTHAQVVLLSNKIKAGLLLEDHKSRLKERI 224

Query: 1054 GYEPSDEQLATSMRIPRVELQAVLMECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLV 875
            G EP+DEQ+A S+R+ R ELQ+ L+ECSLAREKLAMSNVRLVMSIAQ+YD+MGAE+ADLV
Sbjct: 225  GSEPTDEQVAASLRMSRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLV 284

Query: 874  QGGLIGLLRGIEKFDSTKGFKISTYVYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRN 695
            QGGLIGLLRGIEKFDS+KGFKISTYVYWWIRQGVSRAL+ENSRTLRLPSHLHERLSLIRN
Sbjct: 285  QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPSHLHERLSLIRN 344

Query: 694  AKIRLEENGITPSVDRIAECLNMSKKKITNATEAVSKIFSLDREAFPSINGLPGETLHSY 515
            AKIRLEE GITPS+DRIAECLNMS+KK+ NATEA+SK+FSLDREAFPS+NGLPGETLHSY
Sbjct: 345  AKIRLEEKGITPSIDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSY 404

Query: 514  IADTRLENNPWHGVDEWSLQEEVNNLISTTLGTREQDIIRLYYGLDKECLTWEDISRRIG 335
            IAD RLENNPWHGVDEW+L++EVN LI+TTLG RE+DIIRLYYGLD ECLTWEDIS+RIG
Sbjct: 405  IADVRLENNPWHGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTWEDISKRIG 464

Query: 334  LSRERVRQVGLVALEKLKNAARKRKLEAMLVKH 236
            LSRERVRQVGLVALEKLKNAARK ++EAMLVK+
Sbjct: 465  LSRERVRQVGLVALEKLKNAARKGRMEAMLVKY 497


>emb|CBI26421.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score =  580 bits (1494), Expect = e-163
 Identities = 299/390 (76%), Positives = 340/390 (87%)
 Frame = -1

Query: 1405 SMLEKQWNLSFERKRTVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLMVLRRKK 1226
            SMLEKQWNLSF+ ++          K  EV  SG SARQRRIS R +     +M  + K 
Sbjct: 184  SMLEKQWNLSFKARQ----------KRREVTCSGTSARQRRISGRKR-----VMNEKSKS 228

Query: 1225 QIGSIVSPELLQNKLQGYVKGVVSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYE 1046
            ++ + +  E   N+L+GYVKGVVSEELLTH +VV LS KIKAGL LEDHK+RLKER+G E
Sbjct: 229  RVRAALGVE---NRLKGYVKGVVSEELLTHAQVVLLSNKIKAGLLLEDHKSRLKERIGSE 285

Query: 1045 PSDEQLATSMRIPRVELQAVLMECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGG 866
            P+DEQ+A S+R+ R ELQ+ L+ECSLAREKLAMSNVRLVMSIAQ+YD+MGAE+ADLVQGG
Sbjct: 286  PTDEQVAASLRMSRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG 345

Query: 865  LIGLLRGIEKFDSTKGFKISTYVYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKI 686
            LIGLLRGIEKFDS+KGFKISTYVYWWIRQGVSRAL+ENSRTLRLPSHLHERLSLIRNAKI
Sbjct: 346  LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPSHLHERLSLIRNAKI 405

Query: 685  RLEENGITPSVDRIAECLNMSKKKITNATEAVSKIFSLDREAFPSINGLPGETLHSYIAD 506
            RLEE GITPS+DRIAECLNMS+KK+ NATEA+SK+FSLDREAFPS+NGLPGETLHSYIAD
Sbjct: 406  RLEEKGITPSIDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIAD 465

Query: 505  TRLENNPWHGVDEWSLQEEVNNLISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSR 326
             RLENNPWHGVDEW+L++EVN LI+TTLG RE+DIIRLYYGLD ECLTWEDIS+RIGLSR
Sbjct: 466  VRLENNPWHGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTWEDISKRIGLSR 525

Query: 325  ERVRQVGLVALEKLKNAARKRKLEAMLVKH 236
            ERVRQVGLVALEKLKNAARK ++EAMLVK+
Sbjct: 526  ERVRQVGLVALEKLKNAARKGRMEAMLVKY 555


>ref|XP_002319237.1| predicted protein [Populus trichocarpa] gi|222857613|gb|EEE95160.1|
            predicted protein [Populus trichocarpa]
          Length = 499

 Score =  571 bits (1472), Expect = e-160
 Identities = 292/390 (74%), Positives = 336/390 (86%)
 Frame = -1

Query: 1405 SMLEKQWNLSFERKRTVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLMVLRRKK 1226
            SMLEKQWNLSFE   +     ++SNK I V  SG+SARQRR++ + KN        + + 
Sbjct: 118  SMLEKQWNLSFESINSSDSKIKKSNKKIPVTCSGVSARQRRLNNKRKN--------QNQS 169

Query: 1225 QIGSIVSPELLQNKLQGYVKGVVSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYE 1046
            +  S +SP LL N+L+GYVKGVVS+E+L HTEVV LS  I+AGLSLEDHK+ LKERLG E
Sbjct: 170  KFMSDISPGLLLNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSLEDHKSSLKERLGCE 229

Query: 1045 PSDEQLATSMRIPRVELQAVLMECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGG 866
            PSDEQLA S+RI R +LQ+ L++CSLAREKLAMSNVRLVMSIAQK D+MGAE+ADLVQ G
Sbjct: 230  PSDEQLADSLRISRADLQSQLIQCSLAREKLAMSNVRLVMSIAQKNDNMGAEMADLVQAG 289

Query: 865  LIGLLRGIEKFDSTKGFKISTYVYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKI 686
            LIGLLRGIEKFDS+KGFKISTYVYWWIRQGVSRAL+EN RTLRLP+HLHERL LIRNAKI
Sbjct: 290  LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENPRTLRLPNHLHERLGLIRNAKI 349

Query: 685  RLEENGITPSVDRIAECLNMSKKKITNATEAVSKIFSLDREAFPSINGLPGETLHSYIAD 506
            RLEE G+TPS+DRIAE LNMS++K+ NATEA+SK+FSLDREAFPS+NGLPGET HSYIAD
Sbjct: 350  RLEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 409

Query: 505  TRLENNPWHGVDEWSLQEEVNNLISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSR 326
             RLENNPWHGVDEW+L+EEVN LI + L  RE++IIRLY+GLDKECLTWEDIS+R+GLSR
Sbjct: 410  NRLENNPWHGVDEWALKEEVNKLIDSALQEREREIIRLYHGLDKECLTWEDISKRMGLSR 469

Query: 325  ERVRQVGLVALEKLKNAARKRKLEAMLVKH 236
            ERVRQVGLVALEKLK+AARK KLEAMLVKH
Sbjct: 470  ERVRQVGLVALEKLKHAARKGKLEAMLVKH 499