BLASTX nr result

ID: Papaver23_contig00009064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00009064
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312088.1| predicted protein [Populus trichocarpa] gi|2...    70   5e-12
gb|AAG40865.1|AF311225_1 geranylgeranyltransferase beta subunit ...    69   4e-11
ref|NP_181487.1| geranylgeranyl transferase type-1 subunit beta ...    69   4e-11
ref|XP_002879805.1| geranylgeranyltransferase-I beta subunit [Ar...    68   4e-11
gb|EEE53878.1| hypothetical protein OsJ_00386 [Oryza sativa Japo...    71   1e-10

>ref|XP_002312088.1| predicted protein [Populus trichocarpa] gi|222851908|gb|EEE89455.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score = 69.7 bits (169), Expect(2) = 5e-12
 Identities = 38/74 (51%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
 Frame = +2

Query: 2   YDGGFGLVPGLESHGRHT------VQLQLYV*WDLLKMMFCPKGQHLLIDVQSLLEWCLQ 163
           YDGGFG++PG ESHG  T      + L  ++  D+L           +ID+  LLEWCLQ
Sbjct: 216 YDGGFGMIPGSESHGGGTYCAVASLCLMGFIEDDVLSKSAASS----IIDIPLLLEWCLQ 271

Query: 164 RQAIDGGFQGRANK 205
           RQA DGGFQGRANK
Sbjct: 272 RQAADGGFQGRANK 285



 Score = 25.8 bits (55), Expect(2) = 5e-12
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 318 LGGSELLR*CSTTRFLLTCQSK 383
           LGGS+L+   +   FLLTCQS+
Sbjct: 302 LGGSKLIDGTALRGFLLTCQSE 323



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 42/109 (38%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
 Frame = +1

Query: 49  TYCAVAALRLMGFIEDDVLSKGTTSS--DRCAIVVGMVLAEASN*WWISRPSKQATDTCY 222
           TYCAVA+L LMGFIEDDVLSK   SS  D   ++   +  +A++  +  R +K + DTCY
Sbjct: 233 TYCAVASLCLMGFIEDDVLSKSAASSIIDIPLLLEWCLQRQAADGGFQGRANKPS-DTCY 291

Query: 223 ASW*HSYTTES*VGIIACLLT*QVPIGGILRVLGDQNF*DNAALRDFCL 369
           A W                      +G +LR+LG     D  ALR F L
Sbjct: 292 AFW----------------------VGAVLRILGGSKLIDGTALRGFLL 318


>gb|AAG40865.1|AF311225_1 geranylgeranyltransferase beta subunit [Arabidopsis thaliana]
          Length = 376

 Score = 68.9 bits (167), Expect(2) = 4e-11
 Identities = 39/74 (52%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
 Frame = +2

Query: 2   YDGGFGLVPGLESHGRHT------VQLQLYV*WDLLKMMFCPKGQHLLIDVQSLLEWCLQ 163
           YDGGFGL+PG ESHG  T      ++L  Y+  DLL           +ID   LL WCLQ
Sbjct: 220 YDGGFGLIPGSESHGGATYCAIASLRLMGYIGVDLLSN----DSSSSIIDPSLLLNWCLQ 275

Query: 164 RQAIDGGFQGRANK 205
           RQA DGGFQGR NK
Sbjct: 276 RQANDGGFQGRTNK 289



 Score = 23.5 bits (49), Expect(2) = 4e-11
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 318 LGGSELLR*CSTTRFLLTCQSK 383
           +GG  L+   +  +FL++CQSK
Sbjct: 306 IGGDALIDKMALRKFLMSCQSK 327


>ref|NP_181487.1| geranylgeranyl transferase type-1 subunit beta [Arabidopsis
           thaliana] gi|3355484|gb|AAC27846.1| putative
           geranylgeranyl transferase type I beta subunit
           [Arabidopsis thaliana] gi|27311719|gb|AAO00825.1|
           putative geranylgeranyl transferase type I beta subunit
           [Arabidopsis thaliana] gi|30725602|gb|AAP37823.1|
           At2g39550 [Arabidopsis thaliana]
           gi|330254599|gb|AEC09693.1| geranylgeranyl transferase
           type-1 subunit beta [Arabidopsis thaliana]
          Length = 375

 Score = 68.9 bits (167), Expect(2) = 4e-11
 Identities = 39/74 (52%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
 Frame = +2

Query: 2   YDGGFGLVPGLESHGRHT------VQLQLYV*WDLLKMMFCPKGQHLLIDVQSLLEWCLQ 163
           YDGGFGL+PG ESHG  T      ++L  Y+  DLL           +ID   LL WCLQ
Sbjct: 219 YDGGFGLIPGSESHGGATYCAIASLRLMGYIGVDLLSN----DSSSSIIDPSLLLNWCLQ 274

Query: 164 RQAIDGGFQGRANK 205
           RQA DGGFQGR NK
Sbjct: 275 RQANDGGFQGRTNK 288



 Score = 23.5 bits (49), Expect(2) = 4e-11
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 318 LGGSELLR*CSTTRFLLTCQSK 383
           +GG  L+   +  +FL++CQSK
Sbjct: 305 IGGDALIDKMALRKFLMSCQSK 326


>ref|XP_002879805.1| geranylgeranyltransferase-I beta subunit [Arabidopsis lyrata subsp.
           lyrata] gi|297325644|gb|EFH56064.1|
           geranylgeranyltransferase-I beta subunit [Arabidopsis
           lyrata subsp. lyrata]
          Length = 329

 Score = 68.2 bits (165), Expect(2) = 4e-11
 Identities = 38/74 (51%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
 Frame = +2

Query: 2   YDGGFGLVPGLESHGRHT------VQLQLYV*WDLLKMMFCPKGQHLLIDVQSLLEWCLQ 163
           YDGGFGL+PG ESHG  T      ++L  Y+  DLL           +ID   +L WCLQ
Sbjct: 173 YDGGFGLIPGSESHGGATYCAIASLRLMGYIGVDLLSN----DSSSSIIDPSLILNWCLQ 228

Query: 164 RQAIDGGFQGRANK 205
           RQA DGGFQGR NK
Sbjct: 229 RQANDGGFQGRTNK 242



 Score = 24.3 bits (51), Expect(2) = 4e-11
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 318 LGGSELLR*CSTTRFLLTCQSK 383
           +GG  L+   +  +FLL+CQSK
Sbjct: 259 IGGDALIDKIALRKFLLSCQSK 280


>gb|EEE53878.1| hypothetical protein OsJ_00386 [Oryza sativa Japonica Group]
          Length = 304

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 41/74 (55%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
 Frame = +2

Query: 2   YDGGFGLVPGLESHGRHT------VQLQLYV*WDLLKMMFCPKGQHLLIDVQSLLEWCLQ 163
           YDGGFGLVPG ESHG  T      + L  ++  DL   +  P      IDV+ LLEWCLQ
Sbjct: 150 YDGGFGLVPGSESHGGGTFCAVAALCLMGFIQVDLASNLQEPSS----IDVRLLLEWCLQ 205

Query: 164 RQAIDGGFQGRANK 205
           RQA DGGFQGR NK
Sbjct: 206 RQAADGGFQGRRNK 219


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