BLASTX nr result
ID: Papaver23_contig00009064
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver23_contig00009064 (405 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002312088.1| predicted protein [Populus trichocarpa] gi|2... 70 5e-12 gb|AAG40865.1|AF311225_1 geranylgeranyltransferase beta subunit ... 69 4e-11 ref|NP_181487.1| geranylgeranyl transferase type-1 subunit beta ... 69 4e-11 ref|XP_002879805.1| geranylgeranyltransferase-I beta subunit [Ar... 68 4e-11 gb|EEE53878.1| hypothetical protein OsJ_00386 [Oryza sativa Japo... 71 1e-10 >ref|XP_002312088.1| predicted protein [Populus trichocarpa] gi|222851908|gb|EEE89455.1| predicted protein [Populus trichocarpa] Length = 372 Score = 69.7 bits (169), Expect(2) = 5e-12 Identities = 38/74 (51%), Positives = 46/74 (62%), Gaps = 6/74 (8%) Frame = +2 Query: 2 YDGGFGLVPGLESHGRHT------VQLQLYV*WDLLKMMFCPKGQHLLIDVQSLLEWCLQ 163 YDGGFG++PG ESHG T + L ++ D+L +ID+ LLEWCLQ Sbjct: 216 YDGGFGMIPGSESHGGGTYCAVASLCLMGFIEDDVLSKSAASS----IIDIPLLLEWCLQ 271 Query: 164 RQAIDGGFQGRANK 205 RQA DGGFQGRANK Sbjct: 272 RQAADGGFQGRANK 285 Score = 25.8 bits (55), Expect(2) = 5e-12 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +3 Query: 318 LGGSELLR*CSTTRFLLTCQSK 383 LGGS+L+ + FLLTCQS+ Sbjct: 302 LGGSKLIDGTALRGFLLTCQSE 323 Score = 60.5 bits (145), Expect = 1e-07 Identities = 42/109 (38%), Positives = 55/109 (50%), Gaps = 2/109 (1%) Frame = +1 Query: 49 TYCAVAALRLMGFIEDDVLSKGTTSS--DRCAIVVGMVLAEASN*WWISRPSKQATDTCY 222 TYCAVA+L LMGFIEDDVLSK SS D ++ + +A++ + R +K + DTCY Sbjct: 233 TYCAVASLCLMGFIEDDVLSKSAASSIIDIPLLLEWCLQRQAADGGFQGRANKPS-DTCY 291 Query: 223 ASW*HSYTTES*VGIIACLLT*QVPIGGILRVLGDQNF*DNAALRDFCL 369 A W +G +LR+LG D ALR F L Sbjct: 292 AFW----------------------VGAVLRILGGSKLIDGTALRGFLL 318 >gb|AAG40865.1|AF311225_1 geranylgeranyltransferase beta subunit [Arabidopsis thaliana] Length = 376 Score = 68.9 bits (167), Expect(2) = 4e-11 Identities = 39/74 (52%), Positives = 44/74 (59%), Gaps = 6/74 (8%) Frame = +2 Query: 2 YDGGFGLVPGLESHGRHT------VQLQLYV*WDLLKMMFCPKGQHLLIDVQSLLEWCLQ 163 YDGGFGL+PG ESHG T ++L Y+ DLL +ID LL WCLQ Sbjct: 220 YDGGFGLIPGSESHGGATYCAIASLRLMGYIGVDLLSN----DSSSSIIDPSLLLNWCLQ 275 Query: 164 RQAIDGGFQGRANK 205 RQA DGGFQGR NK Sbjct: 276 RQANDGGFQGRTNK 289 Score = 23.5 bits (49), Expect(2) = 4e-11 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = +3 Query: 318 LGGSELLR*CSTTRFLLTCQSK 383 +GG L+ + +FL++CQSK Sbjct: 306 IGGDALIDKMALRKFLMSCQSK 327 >ref|NP_181487.1| geranylgeranyl transferase type-1 subunit beta [Arabidopsis thaliana] gi|3355484|gb|AAC27846.1| putative geranylgeranyl transferase type I beta subunit [Arabidopsis thaliana] gi|27311719|gb|AAO00825.1| putative geranylgeranyl transferase type I beta subunit [Arabidopsis thaliana] gi|30725602|gb|AAP37823.1| At2g39550 [Arabidopsis thaliana] gi|330254599|gb|AEC09693.1| geranylgeranyl transferase type-1 subunit beta [Arabidopsis thaliana] Length = 375 Score = 68.9 bits (167), Expect(2) = 4e-11 Identities = 39/74 (52%), Positives = 44/74 (59%), Gaps = 6/74 (8%) Frame = +2 Query: 2 YDGGFGLVPGLESHGRHT------VQLQLYV*WDLLKMMFCPKGQHLLIDVQSLLEWCLQ 163 YDGGFGL+PG ESHG T ++L Y+ DLL +ID LL WCLQ Sbjct: 219 YDGGFGLIPGSESHGGATYCAIASLRLMGYIGVDLLSN----DSSSSIIDPSLLLNWCLQ 274 Query: 164 RQAIDGGFQGRANK 205 RQA DGGFQGR NK Sbjct: 275 RQANDGGFQGRTNK 288 Score = 23.5 bits (49), Expect(2) = 4e-11 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = +3 Query: 318 LGGSELLR*CSTTRFLLTCQSK 383 +GG L+ + +FL++CQSK Sbjct: 305 IGGDALIDKMALRKFLMSCQSK 326 >ref|XP_002879805.1| geranylgeranyltransferase-I beta subunit [Arabidopsis lyrata subsp. lyrata] gi|297325644|gb|EFH56064.1| geranylgeranyltransferase-I beta subunit [Arabidopsis lyrata subsp. lyrata] Length = 329 Score = 68.2 bits (165), Expect(2) = 4e-11 Identities = 38/74 (51%), Positives = 44/74 (59%), Gaps = 6/74 (8%) Frame = +2 Query: 2 YDGGFGLVPGLESHGRHT------VQLQLYV*WDLLKMMFCPKGQHLLIDVQSLLEWCLQ 163 YDGGFGL+PG ESHG T ++L Y+ DLL +ID +L WCLQ Sbjct: 173 YDGGFGLIPGSESHGGATYCAIASLRLMGYIGVDLLSN----DSSSSIIDPSLILNWCLQ 228 Query: 164 RQAIDGGFQGRANK 205 RQA DGGFQGR NK Sbjct: 229 RQANDGGFQGRTNK 242 Score = 24.3 bits (51), Expect(2) = 4e-11 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = +3 Query: 318 LGGSELLR*CSTTRFLLTCQSK 383 +GG L+ + +FLL+CQSK Sbjct: 259 IGGDALIDKIALRKFLLSCQSK 280 >gb|EEE53878.1| hypothetical protein OsJ_00386 [Oryza sativa Japonica Group] Length = 304 Score = 70.9 bits (172), Expect = 1e-10 Identities = 41/74 (55%), Positives = 46/74 (62%), Gaps = 6/74 (8%) Frame = +2 Query: 2 YDGGFGLVPGLESHGRHT------VQLQLYV*WDLLKMMFCPKGQHLLIDVQSLLEWCLQ 163 YDGGFGLVPG ESHG T + L ++ DL + P IDV+ LLEWCLQ Sbjct: 150 YDGGFGLVPGSESHGGGTFCAVAALCLMGFIQVDLASNLQEPSS----IDVRLLLEWCLQ 205 Query: 164 RQAIDGGFQGRANK 205 RQA DGGFQGR NK Sbjct: 206 RQAADGGFQGRRNK 219