BLASTX nr result
ID: Papaver23_contig00009062
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00009062
(573 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotei... 218 4e-55
emb|CBI34863.3| unnamed protein product [Vitis vinifera] 218 4e-55
ref|XP_002521470.1| RNA binding protein, putative [Ricinus commu... 189 2e-46
ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotei... 176 2e-42
ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore... 176 2e-42
>ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
vinifera]
Length = 2363
Score = 218 bits (556), Expect = 4e-55
Identities = 112/197 (56%), Positives = 142/197 (72%), Gaps = 7/197 (3%)
Frame = +3
Query: 3 EMPIFPSFTEGNLFSFYELCKDYKWSIDDEQVLSYRSAEH----SHKTLVSGALDTMYPS 170
EMPIFPS +G+LFSFYELCK+YKW+++DE+VLS+ AEH + SG+ + P
Sbjct: 1332 EMPIFPSLPQGDLFSFYELCKNYKWTVEDEKVLSFHMAEHIRGDRYGLPSSGSKEIKLPG 1391
Query: 171 YSDIKDLGFINVVYGRSSGKTNVAVXXXXXXXXXXXXXXKMYTASASLWVVSYPPLSLGV 350
+ D KDLGFIN++YGRS+G+T VAV + Y+AS S+ VVS PL+ GV
Sbjct: 1392 HLDEKDLGFINMLYGRSAGRTTVAVSFNCDFISSGHSQSRSYSASMSISVVSELPLAFGV 1451
Query: 351 PITWILPPFYTTSNLLP---ESYNQGDSQGRKGTVIYTLMRSCGGKNEEIHKDAISIEGA 521
PITW+LPP+YTTS+LLP ESY Q D RKGT+ Y+L+RSCGGKNEE+ KDAISI+
Sbjct: 1452 PITWVLPPYYTTSSLLPSSSESYGQWD-LSRKGTITYSLLRSCGGKNEEVQKDAISIDRD 1510
Query: 522 RIKTSDSGNLGCIQAKD 572
RIKT++S NL CIQAKD
Sbjct: 1511 RIKTTESNNLACIQAKD 1527
>emb|CBI34863.3| unnamed protein product [Vitis vinifera]
Length = 1961
Score = 218 bits (556), Expect = 4e-55
Identities = 112/197 (56%), Positives = 142/197 (72%), Gaps = 7/197 (3%)
Frame = +3
Query: 3 EMPIFPSFTEGNLFSFYELCKDYKWSIDDEQVLSYRSAEH----SHKTLVSGALDTMYPS 170
EMPIFPS +G+LFSFYELCK+YKW+++DE+VLS+ AEH + SG+ + P
Sbjct: 1257 EMPIFPSLPQGDLFSFYELCKNYKWTVEDEKVLSFHMAEHIRGDRYGLPSSGSKEIKLPG 1316
Query: 171 YSDIKDLGFINVVYGRSSGKTNVAVXXXXXXXXXXXXXXKMYTASASLWVVSYPPLSLGV 350
+ D KDLGFIN++YGRS+G+T VAV + Y+AS S+ VVS PL+ GV
Sbjct: 1317 HLDEKDLGFINMLYGRSAGRTTVAVSFNCDFISSGHSQSRSYSASMSISVVSELPLAFGV 1376
Query: 351 PITWILPPFYTTSNLLP---ESYNQGDSQGRKGTVIYTLMRSCGGKNEEIHKDAISIEGA 521
PITW+LPP+YTTS+LLP ESY Q D RKGT+ Y+L+RSCGGKNEE+ KDAISI+
Sbjct: 1377 PITWVLPPYYTTSSLLPSSSESYGQWD-LSRKGTITYSLLRSCGGKNEEVQKDAISIDRD 1435
Query: 522 RIKTSDSGNLGCIQAKD 572
RIKT++S NL CIQAKD
Sbjct: 1436 RIKTTESNNLACIQAKD 1452
>ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
gi|223539369|gb|EEF40960.1| RNA binding protein, putative
[Ricinus communis]
Length = 2256
Score = 189 bits (481), Expect = 2e-46
Identities = 100/192 (52%), Positives = 128/192 (66%), Gaps = 3/192 (1%)
Frame = +3
Query: 6 MPIFPSFTEGNLFSFYELCKDYKWSIDDEQVLSYRSAEHSHKTLVSGALDTMYPSYSDIK 185
+PI+PSF EG+LFS YELCK YKW++DDE+VL + A H + + +D K
Sbjct: 1247 VPIYPSFLEGDLFSIYELCKKYKWTVDDEKVLDFYKAGGLHG-------EKNWLQLNDEK 1299
Query: 186 DLGFINVVYGRSSGKTNVAVXXXXXXXXXXXXXXKMYTASASLWVVSYPPLSLGVPITWI 365
+LGF+ V+YGRS+G+T+VAV ++Y AS SL VV Y PL+LG+PITWI
Sbjct: 1300 ELGFMKVLYGRSAGRTSVAVSFSCDFVSTSYSETRLYDASISLLVVPYLPLALGLPITWI 1359
Query: 366 LPPFYTTSNLLP---ESYNQGDSQGRKGTVIYTLMRSCGGKNEEIHKDAISIEGARIKTS 536
LPP Y TS++LP ES+ Q D Q KG + Y+L+RSC KNE HKDAISI+G RIKT
Sbjct: 1360 LPPHYITSSILPSSLESHGQWDGQSHKGIITYSLLRSC-EKNEGWHKDAISIDGDRIKTM 1418
Query: 537 DSGNLGCIQAKD 572
+S NL CIQ KD
Sbjct: 1419 ESNNLACIQGKD 1430
>ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Cucumis
sativus]
Length = 1758
Score = 176 bits (446), Expect = 2e-42
Identities = 94/193 (48%), Positives = 124/193 (64%), Gaps = 3/193 (1%)
Frame = +3
Query: 3 EMPIFPSFTEGNLFSFYELCKDYKWSIDDEQVLSYRSAEHSHKTLVSGALDTMYPSYSDI 182
EMPI+P F EG+ FSFY+LCK Y W+I+DE+V Y P Y +
Sbjct: 1239 EMPIYPLFPEGDAFSFYQLCKGYNWTIEDEKVRLY------------------LPLYMN- 1279
Query: 183 KDLGFINVVYGRSSGKTNVAVXXXXXXXXXXXXXXKMYTASASLWVVSYPPLSLGVPITW 362
+++GFIN+VYGRS+G TN+AV K++++SASL V+ PL+LGVPITW
Sbjct: 1280 EEIGFINMVYGRSAGITNIAVSFLCEFTSGSKVETKIFSSSASLSVIPNLPLALGVPITW 1339
Query: 363 ILPPFYTTSNLLP---ESYNQGDSQGRKGTVIYTLMRSCGGKNEEIHKDAISIEGARIKT 533
ILPPFYT+S LP +SY +SQ RK T+ YT++RSC K+E+ K+AI I RIKT
Sbjct: 1340 ILPPFYTSSKALPSSMDSYGHWESQSRKRTITYTVLRSCDKKDEDAWKNAIYINEERIKT 1399
Query: 534 SDSGNLGCIQAKD 572
S+S N+ CIQAKD
Sbjct: 1400 SESNNIACIQAKD 1412
>ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein
210-like [Cucumis sativus]
Length = 2257
Score = 176 bits (446), Expect = 2e-42
Identities = 94/193 (48%), Positives = 124/193 (64%), Gaps = 3/193 (1%)
Frame = +3
Query: 3 EMPIFPSFTEGNLFSFYELCKDYKWSIDDEQVLSYRSAEHSHKTLVSGALDTMYPSYSDI 182
EMPI+P F EG+ FSFY+LCK Y W+I+DE+V Y P Y +
Sbjct: 1239 EMPIYPLFPEGDAFSFYQLCKGYNWTIEDEKVRLY------------------LPLYMN- 1279
Query: 183 KDLGFINVVYGRSSGKTNVAVXXXXXXXXXXXXXXKMYTASASLWVVSYPPLSLGVPITW 362
+++GFIN+VYGRS+G TN+AV K++++SASL V+ PL+LGVPITW
Sbjct: 1280 EEIGFINMVYGRSAGITNIAVSFLCEFTSGSKVETKIFSSSASLSVIPNLPLALGVPITW 1339
Query: 363 ILPPFYTTSNLLP---ESYNQGDSQGRKGTVIYTLMRSCGGKNEEIHKDAISIEGARIKT 533
ILPPFYT+S LP +SY +SQ RK T+ YT++RSC K+E+ K+AI I RIKT
Sbjct: 1340 ILPPFYTSSKALPSSMDSYGHWESQSRKRTITYTVLRSCDKKDEDAWKNAIYINEERIKT 1399
Query: 534 SDSGNLGCIQAKD 572
S+S N+ CIQAKD
Sbjct: 1400 SESNNIACIQAKD 1412