BLASTX nr result

ID: Papaver23_contig00009010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00009010
         (1426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168988.1| PREDICTED: methyl-CpG-binding domain-contain...    77   1e-11
ref|XP_003632148.1| PREDICTED: methyl-CpG-binding domain-contain...    71   8e-10
ref|XP_002314180.1| methyl binding domain protein [Populus trich...    70   1e-09
emb|CBI16127.3| unnamed protein product [Vitis vinifera]               68   7e-09
ref|NP_200746.1| methyl-CPG-binding domain 6 protein [Arabidopsi...    67   1e-08

>ref|XP_004168988.1| PREDICTED: methyl-CpG-binding domain-containing protein 6-like
            [Cucumis sativus]
          Length = 206

 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 50/149 (33%), Positives = 73/149 (48%)
 Frame = -1

Query: 1189 GSSIDANGSGNLNPVTGNDTVPRQTLGDQNADYEDKDSKPDNMEDGVLQTPATPTVAIES 1010
            GS ID++ S   +P     TVP  TL  ++ D   +  +   +     ++P  P      
Sbjct: 62   GSFIDSSTS---SPTPATSTVPSPTLPSRDLD---RTPRKTPLTSSTRRSPLRPDPLNSF 115

Query: 1009 LAKSNSVKSWRRSGAVGTSLKLGVIEGADLPEWLPQGWKMERKVRQNGASAGMIDAVYTD 830
               S+  K    S +  +   L     ++ P WLP GW +E +VR +GA+AG +D  Y D
Sbjct: 116  NGDSSPSKKVSASNSASSKSAL-----SERPNWLPPGWVVEDRVRSSGATAGTVDKYYFD 170

Query: 829  PEKGRKFWSKVGVLRYLETGTGRIRPKRL 743
            P   R+F SK+ VL +LETGT R R K L
Sbjct: 171  PVSNRRFRSKIEVLYFLETGTLRKRKKSL 199


>ref|XP_003632148.1| PREDICTED: methyl-CpG-binding domain-containing protein 6-like [Vitis
            vinifera]
          Length = 297

 Score = 70.9 bits (172), Expect = 8e-10
 Identities = 71/255 (27%), Positives = 106/255 (41%), Gaps = 8/255 (3%)
 Frame = -1

Query: 1285 AKQIQAEPTDNYSTPT---QARATTSKSYID--NQPYGSS---IDANGSGNLNPVTGNDT 1130
            A+ ++ +  DN  T +   QA     K+ +D    P   S   I+ N   N   + G +T
Sbjct: 47   AQTVKGKREDNLKTASYAPQASEDNHKNLVDPPEDPLLKSSCFIETNVVRNGETLIGAET 106

Query: 1129 VPRQTLGDQNADYEDKDSKPDNMEDGVLQTPATPTVAIESLAKSNSVKSWRRSGAVGTSL 950
            V  QT    +A        PD   D        P++   S ++S S     R  A   + 
Sbjct: 107  VDLQTAS--HASQSCGVGAPDG--DSNWAGEVRPSLD-NSASQSESQPRRGRKRASEATA 161

Query: 949  KLGVIEGADLPEWLPQGWKMERKVRQNGASAGMIDAVYTDPEKGRKFWSKVGVLRYLETG 770
             +  +E  D   WLP GW +E +VR +GASAG  D  + +P  GR+F SK  V  YLETG
Sbjct: 162  SMASVERED---WLPPGWIVEGRVRSSGASAGSRDKYFIEPITGRRFRSKKEVRYYLETG 218

Query: 769  TGRIRPKRLXXXXXXXXXXXXXXXXXTVSMPDFTDQAESGSQAQNSDADGFGSLNPLVGG 590
              R +PK+                     +PD      +GS      ++G+    P + G
Sbjct: 219  EVRKKPKKNPDNSPEKGTKSPPLNFNFEDVPDTVKWVRTGS------SEGW---TPFING 269

Query: 589  ETVTEQTVHNWDADF 545
            + V E +  +W A F
Sbjct: 270  QEVPESSKRDWAAAF 284


>ref|XP_002314180.1| methyl binding domain protein [Populus trichocarpa]
            gi|222850588|gb|EEE88135.1| methyl binding domain protein
            [Populus trichocarpa]
          Length = 214

 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 42/116 (36%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
 Frame = -1

Query: 1099 ADYEDKDSKPDNMEDGVLQT-----PATPTVAIESLAKSNSVKSWRRSGAVGTSLKLGVI 935
            A +   D    N +D + Q      P T T A+E+L + N+     +        K    
Sbjct: 8    AQFPGTDQPVPNQDDALRQNGSVIDPNTRTTAVETLTRPNN--KGNQQPVTPVRAKRRSS 65

Query: 934  EGADLPEWLPQGWKMERKVRQNGASAGMIDAVYTDPEKGRKFWSKVGVLRYLETGT 767
            E      WLP GW +E ++R +GA+AG +D  Y DP  GRKF SK  V  YLETGT
Sbjct: 66   ETTIETSWLPPGWVVEDRIRTSGATAGTVDKYYIDPASGRKFRSKKDVQYYLETGT 121


>emb|CBI16127.3| unnamed protein product [Vitis vinifera]
          Length = 135

 Score = 67.8 bits (164), Expect = 7e-09
 Identities = 41/124 (33%), Positives = 59/124 (47%)
 Frame = -1

Query: 916 EWLPQGWKMERKVRQNGASAGMIDAVYTDPEKGRKFWSKVGVLRYLETGTGRIRPKRLXX 737
           +WLP GW +E +VR +GASAG  D  + +P  GR+F SK  V  YLETG  R +PK+   
Sbjct: 8   DWLPPGWIVEGRVRSSGASAGSRDKYFIEPITGRRFRSKKEVRYYLETGEVRKKPKKNPD 67

Query: 736 XXXXXXXXXXXXXXXTVSMPDFTDQAESGSQAQNSDADGFGSLNPLVGGETVTEQTVHNW 557
                             +PD      +GS      ++G+    P + G+ V E +  +W
Sbjct: 68  NSPEKGTKSPPLNFNFEDVPDTVKWVRTGS------SEGW---TPFINGQEVPESSKRDW 118

Query: 556 DADF 545
            A F
Sbjct: 119 AAAF 122


>ref|NP_200746.1| methyl-CPG-binding domain 6 protein [Arabidopsis thaliana]
            gi|75180469|sp|Q9LTJ1.1|MBD6_ARATH RecName:
            Full=Methyl-CpG-binding domain-containing protein 6;
            Short=AtMBD6; Short=MBD06; AltName:
            Full=Methyl-CpG-binding protein MBD6
            gi|8885544|dbj|BAA97474.1| unnamed protein product
            [Arabidopsis thaliana] gi|28416643|gb|AAO42852.1|
            At5g59380 [Arabidopsis thaliana]
            gi|110743343|dbj|BAE99559.1| hypothetical protein
            [Arabidopsis thaliana] gi|332009795|gb|AED97178.1|
            methyl-CPG-binding domain 6 protein [Arabidopsis
            thaliana]
          Length = 225

 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 16/107 (14%)
 Frame = -1

Query: 1018 IESLAKSNSVKSWRRSGAVGTSLKLGVIEGADL----------------PEWLPQGWKME 887
            ++S AK   ++        G S+++G+  G D                   WLP GW++E
Sbjct: 29   LDSSAKRRPIQGGIGISGSGESVRIGMANGTDQVNHQTESKSRKRAAPGDNWLPPGWRVE 88

Query: 886  RKVRQNGASAGMIDAVYTDPEKGRKFWSKVGVLRYLETGTGRIRPKR 746
             K+R +GA+AG +D  Y +P  GRKF S+  VL YLE GT +   K+
Sbjct: 89   DKIRTSGATAGSVDKYYYEPNTGRKFRSRTEVLYYLEHGTSKRGTKK 135