BLASTX nr result
ID: Papaver23_contig00008994
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00008994
(1927 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004150129.1| PREDICTED: ribosome biogenesis GTPase A-like... 300 e-108
ref|XP_002271564.2| PREDICTED: ribosome biogenesis GTPase A-like... 309 e-105
ref|XP_002520741.1| Nucleolar GTP-binding protein, putative [Ric... 299 e-100
gb|ABK94828.1| unknown [Populus trichocarpa] 291 1e-98
ref|XP_002307583.1| predicted protein [Populus trichocarpa] gi|2... 291 2e-98
>ref|XP_004150129.1| PREDICTED: ribosome biogenesis GTPase A-like [Cucumis sativus]
gi|449507918|ref|XP_004163166.1| PREDICTED: ribosome
biogenesis GTPase A-like [Cucumis sativus]
Length = 370
Score = 300 bits (769), Expect(5) = e-108
Identities = 147/190 (77%), Positives = 169/190 (88%)
Frame = -2
Query: 1068 GAIKLGRLAKSMAVGVNVKRKSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRLCTAAPR 889
G +KLGRLAK++A VNVKR++KGLLPRAVRAGIVGYPNVGKSSLINRLLKRR+C AAPR
Sbjct: 182 GTMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPR 241
Query: 888 PGVTRHLKWVHFGKDLELLDSPGIIPMRISDQTSAIKLAICDDIGERSYNVADVAAILVQ 709
PGVTR LKWV FG DLELLDSPGIIPMRISDQT+AIKLAICDDIGERSYN ADVAAILVQ
Sbjct: 242 PGVTRELKWVRFGNDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILVQ 301
Query: 708 MLMRIPTVGSKALYQRYKILAEGPGHSGKIFIDKLALQMFNGDVHQASFRLLTDFRKGKF 529
+L ++P+VG + L +RYK+ + G G+IF+ KLALQ+FNGD HQA+FR+L+DFRKGKF
Sbjct: 302 ILTKLPSVGIETLQKRYKV--DAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKF 359
Query: 528 GWVALERPPK 499
GW ALERPP+
Sbjct: 360 GWTALERPPR 369
Score = 90.1 bits (222), Expect(5) = e-108
Identities = 40/50 (80%), Positives = 49/50 (98%)
Frame = -3
Query: 1343 LKLMDVVIEVRDAKVPLATGHPQMEAWIGNRKRILVLNREDMISTSDRNA 1194
LKLMDVVIEVRDA++P++T HPQM+AW+GNR+RILVLNREDMIS++DRNA
Sbjct: 111 LKLMDVVIEVRDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNA 160
Score = 46.6 bits (109), Expect(5) = e-108
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Frame = -2
Query: 1614 SIQIVGGKAPNWYSNGDTYEGADGEI---DWPDLDADLQYWTRLLRPVR 1477
+IQIVGGK N+ + ++ E+ DW D +ADL YWT LRPV+
Sbjct: 46 TIQIVGGKTSNFLGDSTPKGASNNELLEGDWVDFEADLYYWTNALRPVQ 94
Score = 26.2 bits (56), Expect(5) = e-108
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1
Query: 1186 QGIKVVFANGKLGM 1145
QGIKVVF+NG+ GM
Sbjct: 168 QGIKVVFSNGQHGM 181
Score = 21.6 bits (44), Expect(5) = e-108
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1
Query: 1363 QWYPGH 1346
QWYPGH
Sbjct: 94 QWYPGH 99
>ref|XP_002271564.2| PREDICTED: ribosome biogenesis GTPase A-like [Vitis vinifera]
gi|296086696|emb|CBI32331.3| unnamed protein product
[Vitis vinifera]
Length = 367
Score = 309 bits (792), Expect(3) = e-105
Identities = 154/189 (81%), Positives = 170/189 (89%)
Frame = -2
Query: 1068 GAIKLGRLAKSMAVGVNVKRKSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRLCTAAPR 889
G++KL RLAK++A GVNVKR++KGLLPR VRAGIVGYPNVGKSSLINRLLKRR+C AAPR
Sbjct: 180 GSMKLSRLAKTLASGVNVKRRAKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCPAAPR 239
Query: 888 PGVTRHLKWVHFGKDLELLDSPGIIPMRISDQTSAIKLAICDDIGERSYNVADVAAILVQ 709
PGVTR LKWV FGKDLELLDSPGIIPMRISDQ++AIKLAICDDIGERSY+VADVAAILVQ
Sbjct: 240 PGVTRQLKWVQFGKDLELLDSPGIIPMRISDQSAAIKLAICDDIGERSYDVADVAAILVQ 299
Query: 708 MLMRIPTVGSKALYQRYKILAEGPGHSGKIFIDKLALQMFNGDVHQASFRLLTDFRKGKF 529
ML RIP VG KALY RYKI + G G IF+ KLALQ+FNGD HQA+FR+LTDFRKGKF
Sbjct: 300 MLTRIPAVGPKALYNRYKI--DTDGLCGNIFVQKLALQLFNGDTHQAAFRILTDFRKGKF 357
Query: 528 GWVALERPP 502
GW+ALERPP
Sbjct: 358 GWIALERPP 366
Score = 91.7 bits (226), Expect(3) = e-105
Identities = 42/50 (84%), Positives = 48/50 (96%)
Frame = -3
Query: 1343 LKLMDVVIEVRDAKVPLATGHPQMEAWIGNRKRILVLNREDMISTSDRNA 1194
LKLMDVVIEV+DA++PL+T HPQME+W+GNRKRILVLNREDMIST DRNA
Sbjct: 109 LKLMDVVIEVQDARIPLSTSHPQMESWLGNRKRILVLNREDMISTEDRNA 158
Score = 30.8 bits (68), Expect(3) = e-105
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -1
Query: 1195 HANQGIKVVFANGKLGMVS 1139
+A QGIKVVF+NG+LGM S
Sbjct: 163 YAMQGIKVVFSNGQLGMGS 181
>ref|XP_002520741.1| Nucleolar GTP-binding protein, putative [Ricinus communis]
gi|223540126|gb|EEF41703.1| Nucleolar GTP-binding
protein, putative [Ricinus communis]
Length = 366
Score = 299 bits (765), Expect(3) = e-100
Identities = 145/190 (76%), Positives = 172/190 (90%)
Frame = -2
Query: 1068 GAIKLGRLAKSMAVGVNVKRKSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRLCTAAPR 889
G +KL RLAK++A VNVKR++KGLLPR VRAG+VGYPNVGKSSLINRLLKRR+C AA R
Sbjct: 158 GTVKLSRLAKALAASVNVKRRAKGLLPRPVRAGVVGYPNVGKSSLINRLLKRRMCEAASR 217
Query: 888 PGVTRHLKWVHFGKDLELLDSPGIIPMRISDQTSAIKLAICDDIGERSYNVADVAAILVQ 709
PGVTR LKWV FG +LELLDSPG++PMRI+DQ++AIKLAICDDIGERSY+VADVAAILVQ
Sbjct: 218 PGVTRELKWVRFGNELELLDSPGMLPMRINDQSAAIKLAICDDIGERSYDVADVAAILVQ 277
Query: 708 MLMRIPTVGSKALYQRYKILAEGPGHSGKIFIDKLALQMFNGDVHQASFRLLTDFRKGKF 529
ML RIP+VG +AL++RYKI + G++G+IFI KLA+Q+FNGD HQA+FR+LTDFRKGKF
Sbjct: 278 MLTRIPSVGLEALHRRYKI--DVDGYNGRIFIQKLAIQLFNGDTHQAAFRILTDFRKGKF 335
Query: 528 GWVALERPPK 499
GWVALERPP+
Sbjct: 336 GWVALERPPR 345
Score = 89.4 bits (220), Expect(3) = e-100
Identities = 41/50 (82%), Positives = 48/50 (96%)
Frame = -3
Query: 1343 LKLMDVVIEVRDAKVPLATGHPQMEAWIGNRKRILVLNREDMISTSDRNA 1194
LKLMDVVIEVRDA++PL+T HPQM++W+GNRKRILVLNREDMIS +DRNA
Sbjct: 87 LKLMDVVIEVRDARIPLSTTHPQMDSWLGNRKRILVLNREDMISKADRNA 136
Score = 28.5 bits (62), Expect(3) = e-100
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1
Query: 1192 ANQGIKVVFANGKLGM 1145
A QGIK VFANG+ GM
Sbjct: 142 ATQGIKAVFANGQFGM 157
>gb|ABK94828.1| unknown [Populus trichocarpa]
Length = 367
Score = 291 bits (746), Expect(3) = 1e-98
Identities = 143/190 (75%), Positives = 165/190 (86%)
Frame = -2
Query: 1068 GAIKLGRLAKSMAVGVNVKRKSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRLCTAAPR 889
G +KL R AKS+A VNVKR+ KGLLPR VRAGIVGYPNVGKSSLINRLLKRR+C AAPR
Sbjct: 180 GTMKLSRFAKSLAASVNVKRREKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCPAAPR 239
Query: 888 PGVTRHLKWVHFGKDLELLDSPGIIPMRISDQTSAIKLAICDDIGERSYNVADVAAILVQ 709
PGVTR L+WV FG DLELLDSPGIIPMRISDQ++AIKLAICDDIGERSY+V DVAAILVQ
Sbjct: 240 PGVTRELRWVRFGNDLELLDSPGIIPMRISDQSAAIKLAICDDIGERSYDVTDVAAILVQ 299
Query: 708 MLMRIPTVGSKALYQRYKILAEGPGHSGKIFIDKLALQMFNGDVHQASFRLLTDFRKGKF 529
+L ++PTVG+KAL RYK+ A+ GKIF+ KL++ +FNGD HQA+FR+L+DFRKGKF
Sbjct: 300 ILTKLPTVGAKALNNRYKMDAD--DFCGKIFVQKLSVHLFNGDTHQAAFRILSDFRKGKF 357
Query: 528 GWVALERPPK 499
GW ALERPP+
Sbjct: 358 GWAALERPPR 367
Score = 90.5 bits (223), Expect(3) = 1e-98
Identities = 42/50 (84%), Positives = 48/50 (96%)
Frame = -3
Query: 1343 LKLMDVVIEVRDAKVPLATGHPQMEAWIGNRKRILVLNREDMISTSDRNA 1194
LKLMDVVIEVRDA++PL+T HPQM+AW+GNRKRILVLNREDMIS +DRNA
Sbjct: 109 LKLMDVVIEVRDARIPLSTTHPQMDAWLGNRKRILVLNREDMISKADRNA 158
Score = 28.1 bits (61), Expect(3) = 1e-98
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 1192 ANQGIKVVFANGKLGM 1145
A QGIKVV +NG+LGM
Sbjct: 164 ARQGIKVVLSNGQLGM 179
>ref|XP_002307583.1| predicted protein [Populus trichocarpa] gi|222857032|gb|EEE94579.1|
predicted protein [Populus trichocarpa]
Length = 387
Score = 291 bits (744), Expect(3) = 2e-98
Identities = 143/189 (75%), Positives = 164/189 (86%)
Frame = -2
Query: 1068 GAIKLGRLAKSMAVGVNVKRKSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRLCTAAPR 889
G +KL R AKS+A VNVKR+ KGLLPR VRAGIVGYPNVGKSSLINRLLKRR+C AAPR
Sbjct: 180 GTMKLSRFAKSLAASVNVKRREKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCPAAPR 239
Query: 888 PGVTRHLKWVHFGKDLELLDSPGIIPMRISDQTSAIKLAICDDIGERSYNVADVAAILVQ 709
PGVTR L+WV FG DLELLDSPGIIPMRISDQ++AIKLAICDDIGERSY+V DVAAILVQ
Sbjct: 240 PGVTRELRWVRFGNDLELLDSPGIIPMRISDQSAAIKLAICDDIGERSYDVTDVAAILVQ 299
Query: 708 MLMRIPTVGSKALYQRYKILAEGPGHSGKIFIDKLALQMFNGDVHQASFRLLTDFRKGKF 529
+L ++PTVG+KAL RYK+ A+ GKIF+ KL++ +FNGD HQA+FR+L+DFRKGKF
Sbjct: 300 ILTKLPTVGAKALNNRYKMDAD--DFCGKIFVQKLSVHLFNGDTHQAAFRILSDFRKGKF 357
Query: 528 GWVALERPP 502
GW ALERPP
Sbjct: 358 GWAALERPP 366
Score = 90.5 bits (223), Expect(3) = 2e-98
Identities = 42/50 (84%), Positives = 48/50 (96%)
Frame = -3
Query: 1343 LKLMDVVIEVRDAKVPLATGHPQMEAWIGNRKRILVLNREDMISTSDRNA 1194
LKLMDVVIEVRDA++PL+T HPQM+AW+GNRKRILVLNREDMIS +DRNA
Sbjct: 109 LKLMDVVIEVRDARIPLSTTHPQMDAWLGNRKRILVLNREDMISKADRNA 158
Score = 28.1 bits (61), Expect(3) = 2e-98
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 1192 ANQGIKVVFANGKLGM 1145
A QGIKVV +NG+LGM
Sbjct: 164 ARQGIKVVLSNGQLGM 179