BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00008920
         (1001 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL49933.1| AT5g58420/mqj2_10 [Arabidopsis thaliana] gi|23505...    62   2e-08
emb|CAA75242.1| ribosomal protein S4 [Oryza sativa Japonica Group]     62   2e-08
gb|AAB67831.1| ribsomal protein S4 [Zea mays] gi|194707820|gb|AC...    62   2e-08
ref|NP_001043015.1| Os01g0358400 [Oryza sativa Japonica Group] g...    62   2e-08
ref|NP_001045624.1| Os02g0105900 [Oryza sativa Japonica Group] g...    62   2e-08

>gb|AAL49933.1| AT5g58420/mqj2_10 [Arabidopsis thaliana] gi|23505827|gb|AAN28773.1|
           At5g58420/mqj2_10 [Arabidopsis thaliana]
          Length = 262

 Score = 61.6 bits (148), Expect(2) = 2e-08
 Identities = 31/33 (93%), Positives = 31/33 (93%), Gaps = 1/33 (3%)
 Frame = +3

Query: 288 ARGLKKHLKRLNAPKR-MLDKLGGAFAPKPSSG 383
           ARGLKKHLKRLNAPK  MLDKLGGAFAPKPSSG
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSG 34



 Score = 23.9 bits (50), Expect(2) = 2e-08
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 385 SDPYKYRECLPFIFFPVKQIE 447
           S P+K RECLP +     ++E
Sbjct: 33  SGPHKSRECLPLVLIIRNRLE 53


>emb|CAA75242.1| ribosomal protein S4 [Oryza sativa Japonica Group]
          Length = 268

 Score = 61.6 bits (148), Expect(2) = 2e-08
 Identities = 31/33 (93%), Positives = 31/33 (93%), Gaps = 1/33 (3%)
 Frame = +3

Query: 288 ARGLKKHLKRLNAPKR-MLDKLGGAFAPKPSSG 383
           ARGLKKHLKRLNAPK  MLDKLGGAFAPKPSSG
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSG 34



 Score = 23.5 bits (49), Expect(2) = 2e-08
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 385 SDPYKYRECLPFI 423
           S P+K RECLP I
Sbjct: 33  SGPHKSRECLPLI 45


>gb|AAB67831.1| ribsomal protein S4 [Zea mays] gi|194707820|gb|ACF87994.1| unknown
           [Zea mays] gi|195607094|gb|ACG25377.1| 40S ribosomal
           protein S4 [Zea mays] gi|195653033|gb|ACG45984.1| 40S
           ribosomal protein S4 [Zea mays]
           gi|414873848|tpg|DAA52405.1| TPA: ribosomal protein S4
           [Zea mays]
          Length = 265

 Score = 61.6 bits (148), Expect(2) = 2e-08
 Identities = 31/33 (93%), Positives = 31/33 (93%), Gaps = 1/33 (3%)
 Frame = +3

Query: 288 ARGLKKHLKRLNAPKR-MLDKLGGAFAPKPSSG 383
           ARGLKKHLKRLNAPK  MLDKLGGAFAPKPSSG
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSG 34



 Score = 23.5 bits (49), Expect(2) = 2e-08
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 385 SDPYKYRECLPFI 423
           S P+K RECLP I
Sbjct: 33  SGPHKSRECLPLI 45


>ref|NP_001043015.1| Os01g0358400 [Oryza sativa Japonica Group]
           gi|53791616|dbj|BAD52963.1| putative 40S ribosomal
           protein S4 [Oryza sativa Japonica Group]
           gi|113532546|dbj|BAF04929.1| Os01g0358400 [Oryza sativa
           Japonica Group] gi|125525886|gb|EAY74000.1| hypothetical
           protein OsI_01884 [Oryza sativa Indica Group]
           gi|125570348|gb|EAZ11863.1| hypothetical protein
           OsJ_01737 [Oryza sativa Japonica Group]
           gi|149391309|gb|ABR25672.1| 40S ribosomal protein S4
           [Oryza sativa Indica Group] gi|215692713|dbj|BAG88133.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 265

 Score = 61.6 bits (148), Expect(2) = 2e-08
 Identities = 31/33 (93%), Positives = 31/33 (93%), Gaps = 1/33 (3%)
 Frame = +3

Query: 288 ARGLKKHLKRLNAPKR-MLDKLGGAFAPKPSSG 383
           ARGLKKHLKRLNAPK  MLDKLGGAFAPKPSSG
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSG 34



 Score = 23.5 bits (49), Expect(2) = 2e-08
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 385 SDPYKYRECLPFI 423
           S P+K RECLP I
Sbjct: 33  SGPHKSRECLPLI 45


>ref|NP_001045624.1| Os02g0105900 [Oryza sativa Japonica Group]
           gi|109940160|sp|P49398.3|RS4_ORYSJ RecName: Full=40S
           ribosomal protein S4; AltName: Full=SCAR protein SS620
           gi|313103631|pdb|3IZ6|D Chain D, Localization Of The
           Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em
           Map Of Triticum Aestivum Translating 80s Ribosome
           gi|50252099|dbj|BAD28085.1| putative ribosomal protein
           S4 [Oryza sativa Japonica Group]
           gi|113535155|dbj|BAF07538.1| Os02g0105900 [Oryza sativa
           Japonica Group] gi|125537716|gb|EAY84111.1| hypothetical
           protein OsI_05494 [Oryza sativa Indica Group]
           gi|125580492|gb|EAZ21423.1| hypothetical protein
           OsJ_05027 [Oryza sativa Japonica Group]
           gi|169244433|gb|ACA50490.1| 40S ribosomal protein S4
           [Oryza sativa Japonica Group]
           gi|215678909|dbj|BAG96339.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215734827|dbj|BAG95549.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|306415995|gb|ADM86872.1| 40S ribosomal protein S4
           [Oryza sativa Japonica Group]
          Length = 265

 Score = 61.6 bits (148), Expect(2) = 2e-08
 Identities = 31/33 (93%), Positives = 31/33 (93%), Gaps = 1/33 (3%)
 Frame = +3

Query: 288 ARGLKKHLKRLNAPKR-MLDKLGGAFAPKPSSG 383
           ARGLKKHLKRLNAPK  MLDKLGGAFAPKPSSG
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSG 34



 Score = 23.5 bits (49), Expect(2) = 2e-08
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 385 SDPYKYRECLPFI 423
           S P+K RECLP I
Sbjct: 33  SGPHKSRECLPLI 45