BLASTX nr result

ID: Papaver23_contig00008874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00008874
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15996.3| unnamed protein product [Vitis vinifera]               89   4e-16
emb|CAN78612.1| hypothetical protein VITISV_028922 [Vitis vinifera]    89   4e-16
ref|XP_004143147.1| PREDICTED: 50S ribosomal protein L4, chlorop...    82   7e-14
ref|XP_002309469.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_003529033.1| PREDICTED: 50S ribosomal protein L4, chlorop...    77   1e-12

>emb|CBI15996.3| unnamed protein product [Vitis vinifera]
          Length = 99

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/51 (88%), Positives = 47/51 (92%)
 Frame = +1

Query: 1   VSDNVRLSSRNIRTLKMLTPRTLNLFDILNSDKLVLTQPSVDYLNKMYEPE 153
           VSDNVRLSSRNI TLKMLTPRTLNLFDILNSDKLVLTQ +VDYLN+MY  E
Sbjct: 19  VSDNVRLSSRNIGTLKMLTPRTLNLFDILNSDKLVLTQETVDYLNRMYAVE 69


>emb|CAN78612.1| hypothetical protein VITISV_028922 [Vitis vinifera]
          Length = 306

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/51 (88%), Positives = 47/51 (92%)
 Frame = +1

Query: 1   VSDNVRLSSRNIRTLKMLTPRTLNLFDILNSDKLVLTQPSVDYLNKMYEPE 153
           VSDNVRLSSRNI TLKMLTPRTLNLFDILNSDKLVLTQ +VDYLN+MY  E
Sbjct: 210 VSDNVRLSSRNIGTLKMLTPRTLNLFDILNSDKLVLTQETVDYLNRMYAVE 260


>ref|XP_004143147.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like [Cucumis
           sativus] gi|449496602|ref|XP_004160176.1| PREDICTED: 50S
           ribosomal protein L4, chloroplastic-like [Cucumis
           sativus]
          Length = 288

 Score = 81.6 bits (200), Expect = 7e-14
 Identities = 41/53 (77%), Positives = 46/53 (86%)
 Frame = +1

Query: 1   VSDNVRLSSRNIRTLKMLTPRTLNLFDILNSDKLVLTQPSVDYLNKMYEPEYD 159
           VSDNVRLSSRNI TLK+LTPRTLNLFDIL+SDKLVLT  +VDYLN+ Y   Y+
Sbjct: 211 VSDNVRLSSRNIGTLKLLTPRTLNLFDILDSDKLVLTPTAVDYLNERYGINYE 263


>ref|XP_002309469.1| predicted protein [Populus trichocarpa] gi|222855445|gb|EEE92992.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/53 (75%), Positives = 45/53 (84%)
 Frame = +1

Query: 1   VSDNVRLSSRNIRTLKMLTPRTLNLFDILNSDKLVLTQPSVDYLNKMYEPEYD 159
           VSDNV LSSRNI TL+MLTPRTLNLFDILNSDKLVLT  +VDYLN  Y  +++
Sbjct: 210 VSDNVGLSSRNIGTLRMLTPRTLNLFDILNSDKLVLTPDTVDYLNGRYGVDFE 262


>ref|XP_003529033.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like isoform 1
           [Glycine max] gi|356520772|ref|XP_003529034.1|
           PREDICTED: 50S ribosomal protein L4, chloroplastic-like
           isoform 2 [Glycine max]
          Length = 303

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/53 (71%), Positives = 46/53 (86%)
 Frame = +1

Query: 1   VSDNVRLSSRNIRTLKMLTPRTLNLFDILNSDKLVLTQPSVDYLNKMYEPEYD 159
           V +NVRLSSRNI TLKM TPRTLNL+DIL++DKLVLTQ +VDYLN+ Y  +Y+
Sbjct: 215 VPENVRLSSRNIGTLKMHTPRTLNLYDILDADKLVLTQGAVDYLNQRYGGDYE 267


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