BLASTX nr result

ID: Papaver23_contig00008805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00008805
         (991 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containi...   202   1e-49
ref|XP_002516159.1| pentatricopeptide repeat-containing protein,...   201   3e-49
ref|XP_002324203.1| predicted protein [Populus trichocarpa] gi|2...   191   2e-46
ref|XP_002309456.1| predicted protein [Populus trichocarpa] gi|2...   179   9e-43
gb|ABK96374.1| unknown [Populus trichocarpa x Populus deltoides]      179   9e-43

>ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
           [Vitis vinifera]
          Length = 1580

 Score =  202 bits (514), Expect = 1e-49
 Identities = 125/230 (54%), Positives = 147/230 (63%), Gaps = 7/230 (3%)
 Frame = +1

Query: 322 MNLSKKGVSNNVTKL-SVVPNTNLNPNAAEFVPFALRSSPGSTSAGEVVTTPKPETPGTS 498
           M+LSKKG   N  KL S    T LNPNAAEFVPFALRSS GSTS G+      P   GT 
Sbjct: 1   MSLSKKGNPINNIKLDSTAKVTTLNPNAAEFVPFALRSSSGSTSTGDASARFTPS--GTL 58

Query: 499 GKAVLDRTESTVS---DEEALQYWRRQLPDDITPDFNFAGDEELQGPXXXXXXXXXXXDG 669
           GKA LDR+ES++S   DEEA QYWR QLPDDITPDF   G++E Q             D 
Sbjct: 59  GKAKLDRSESSISNNSDEEAHQYWRCQLPDDITPDFKVMGEDESQALGGLSLAGLSLHDS 118

Query: 670 SEASMFSGSTGGGQILSKQQELSSHGVGNNNNLFDKMKYSVSSYVVEDQSSAGFLNLPTN 849
           +E S F  S G G IL++QQELS H V N N+  DKM+YS S Y  ED SSA FL+LP  
Sbjct: 119 TETSRF--SAGSGYILNEQQELSPHHV-NGNSFTDKMRYSASPY-GEDPSSATFLHLPNK 174

Query: 850 PWDKQNVSNDQ-LGIGKEGFQYNGNG--GYLNDMLSENPSFDGSEVNPVE 990
           PWDKQ V  DQ L  G+EG  YNGN   G++NDML+E+   D +++NP+E
Sbjct: 175 PWDKQIVHGDQLLSNGREGTPYNGNSRHGFVNDMLNEHAMVDETDMNPLE 224


>ref|XP_002516159.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544645|gb|EEF46161.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1439

 Score =  201 bits (510), Expect = 3e-49
 Identities = 113/232 (48%), Positives = 147/232 (63%), Gaps = 9/232 (3%)
 Frame = +1

Query: 322 MNLSKKGVSNNVTKLSVVPN-TNLNPNAAEFVPFALRS--SPGSTSAGEVVTTPKPETPG 492
           M+LSKKG   N TKL++    T LNPNAAEFVPF+LRS  SP  +++    TT +  T G
Sbjct: 1   MSLSKKGSQTNTTKLNIPSKATALNPNAAEFVPFSLRSLSSPSGSTSNAAATTARFATSG 60

Query: 493 TSGKAVLDRTES---TVSDEEALQYWRRQLPDDITPDFNFAGDEELQGPXXXXXXXXXXX 663
             GKAVLDR+ES   T SDEEA Q+WR QLPDDITPDF   G++E Q             
Sbjct: 61  PVGKAVLDRSESSISTTSDEEAHQFWRHQLPDDITPDFKVMGEDESQSLGGLSLAGLSLH 120

Query: 664 DGSEASMFSGSTGGGQILSKQQELSSHGVGNNNNLFDKMKYSVSSYVVEDQSSAGFLNLP 843
           D SE   F  S G G IL++QQE S   + N ++  +KM+Y+++SY  +  S+AG+LNLP
Sbjct: 121 DSSEVPKFPASVGSGYILTEQQEPSPRHI-NGSSFSEKMRYAIASYGEDPTSAAGYLNLP 179

Query: 844 TNPWDKQNVSNDQ-LGIGKEGFQYNGNG--GYLNDMLSENPSFDGSEVNPVE 990
           T PWDKQ ++ND  LG G+E   YNGN   G++NDML E    D  ++NP++
Sbjct: 180 TKPWDKQIINNDHLLGNGREVHPYNGNSRRGFMNDMLGEQAIVDEPDMNPLD 231


>ref|XP_002324203.1| predicted protein [Populus trichocarpa] gi|222865637|gb|EEF02768.1|
           predicted protein [Populus trichocarpa]
          Length = 583

 Score =  191 bits (486), Expect = 2e-46
 Identities = 114/233 (48%), Positives = 149/233 (63%), Gaps = 10/233 (4%)
 Frame = +1

Query: 322 MNLSKKGVSNNVTKLSVVPN--TNLNPNAAEFVPFALRSS--PGSTSAGEVVTTPKPETP 489
           MNLSKKG   N TKLS+ PN  T LNPNAAEFVPF+LRSS  P  +++       K  T 
Sbjct: 1   MNLSKKGSLTNDTKLSL-PNKATTLNPNAAEFVPFSLRSSSSPSGSTSNTTDAATKLATS 59

Query: 490 GTSGKAVLDRTESTVS---DEEALQYWRRQLPDDITPDFNFAGDEELQGPXXXXXXXXXX 660
           GT GK+VLDR+ES+VS   D+EA Q+WR QLPDDITPDF    ++E QG           
Sbjct: 60  GTVGKSVLDRSESSVSNASDDEAHQFWRHQLPDDITPDFKVMNEDESQGLGGLSLAGLSL 119

Query: 661 XDGSEASMFSGSTGGGQILSKQQELSSHGVGNNNNLFDKMKYSVSSYVVEDQSSAGFLNL 840
            D SE   F  S+  G +L++QQE S H + N ++  + M+Y+V+SY  ED +SA FLNL
Sbjct: 120 HDSSEVPRFHASSRSGYVLTEQQEPSPHHI-NGSSFSENMRYAVASY-GEDPTSASFLNL 177

Query: 841 PTNPWDKQNVSNDQ-LGIGKEGFQYNGNG--GYLNDMLSENPSFDGSEVNPVE 990
           PT PWDKQ  ++DQ L  G+E   YNGN   G+ +++L E+   D +E+NP+E
Sbjct: 178 PTKPWDKQIANSDQLLSNGREVHPYNGNSRHGFRSEILGEHAIVDDTEINPLE 230


>ref|XP_002309456.1| predicted protein [Populus trichocarpa] gi|222855432|gb|EEE92979.1|
           predicted protein [Populus trichocarpa]
          Length = 581

 Score =  179 bits (454), Expect = 9e-43
 Identities = 111/231 (48%), Positives = 143/231 (61%), Gaps = 9/231 (3%)
 Frame = +1

Query: 322 MNLSKKGVSNNVTKLSVVPN-TNLNPNAAEFVPFALRSS--PGSTSAGEVVTTPKPETPG 492
           M+LSKKG   N TKL++    T LNPNAAEFVPF+LRSS  P  +++       K  T G
Sbjct: 1   MSLSKKGSLTNDTKLNLPSKATTLNPNAAEFVPFSLRSSSSPSGSTSNSADAATKFTTSG 60

Query: 493 TSGKAVLDRTESTVS---DEEALQYWRRQLPDDITPDFNFAGDEELQGPXXXXXXXXXXX 663
           T GKAVLDR+ES+VS   D+EA Q+WR QLPDDITPDF    D+E QG            
Sbjct: 61  TVGKAVLDRSESSVSNASDDEAHQFWRHQLPDDITPDFKVMSDDESQGLGGLSLAGLSLH 120

Query: 664 DGSEASMFSGSTGGGQILSKQQELSSHGVGNNNNLFDKMKYSVSSYVVEDQSSAGFLNLP 843
           D SE   F  S+  G +L++QQE S   + N ++  +KM+Y  +SY  ED SSA FLNLP
Sbjct: 121 D-SEVPRFHASSRSGYVLTEQQEPSPRHM-NGSSFGEKMRYPSASY-GEDPSSASFLNLP 177

Query: 844 TNPWDKQNVSNDQ-LGIGKEGFQYNGNG--GYLNDMLSENPSFDGSEVNPV 987
           T PWDKQ  + D  LG G+E   YNGN   G+ +++L E+   D +E+NP+
Sbjct: 178 TKPWDKQIANGDHLLGNGREVHPYNGNSRHGFRSEILGEHAIVDDTEINPL 228


>gb|ABK96374.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 581

 Score =  179 bits (454), Expect = 9e-43
 Identities = 111/231 (48%), Positives = 143/231 (61%), Gaps = 9/231 (3%)
 Frame = +1

Query: 322 MNLSKKGVSNNVTKLSVVPN-TNLNPNAAEFVPFALRSS--PGSTSAGEVVTTPKPETPG 492
           M+LSKKG   N TKL++    T LNPNAAEFVPF+LRSS  P  +++       K  T G
Sbjct: 1   MSLSKKGSLTNDTKLNLPSKATTLNPNAAEFVPFSLRSSSSPSGSTSNSADAATKFTTSG 60

Query: 493 TSGKAVLDRTESTVS---DEEALQYWRRQLPDDITPDFNFAGDEELQGPXXXXXXXXXXX 663
           T GKAVLDR+ES+VS   D+EA Q+WR QLPDDITPDF    D+E QG            
Sbjct: 61  TVGKAVLDRSESSVSNASDDEAHQFWRHQLPDDITPDFKVMSDDESQGLGGLSLAGLSLH 120

Query: 664 DGSEASMFSGSTGGGQILSKQQELSSHGVGNNNNLFDKMKYSVSSYVVEDQSSAGFLNLP 843
           D SE   F  S+  G +L++QQE S   + N ++  +KM+Y  +SY  ED SSA FLNLP
Sbjct: 121 D-SEVPRFHASSRSGYVLTEQQEPSPRHM-NGSSFGEKMRYPSASY-GEDPSSASFLNLP 177

Query: 844 TNPWDKQNVSNDQ-LGIGKEGFQYNGNG--GYLNDMLSENPSFDGSEVNPV 987
           T PWDKQ  + D  LG G+E   YNGN   G+ +++L E+   D +E+NP+
Sbjct: 178 TKPWDKQIANGDHLLGNGREVHPYNGNSRHGFRSEILGEHAIVDDTEINPL 228


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