BLASTX nr result

ID: Papaver23_contig00008746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00008746
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...    96   6e-18
emb|CBI17233.3| unnamed protein product [Vitis vinifera]               96   6e-18
ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|2...    95   1e-17
ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protei...    92   7e-17
ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protei...    92   7e-17

>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis vinifera]
          Length = 1139

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 58/147 (39%), Positives = 81/147 (55%), Gaps = 18/147 (12%)
 Frame = -3

Query: 596  CLAMFWGPLAPPHTRITVVHG---TKEVFRVAAKAVVLDPKHHLKIMKHSKWEGKFHKTL 426
            CLAMFWGPLAPP+T +  V      +  FR+ A AVVL+  H  +++K  K  G+  K +
Sbjct: 834  CLAMFWGPLAPPNTGVVAVQNLSNNQATFRIIATAVVLEFNHAARLVKKIKLVGEPCK-I 892

Query: 425  NERTALIK-FEPEDIDVAEFKGAPIRTESGIWGKVNKVIK--------------RKGIAT 291
             ++TALIK     D+++A F+GA ++T SGI G+V K  K              R+GIA 
Sbjct: 893  FKKTALIKNMFTSDLEIARFEGAAVQTASGIRGQVKKAAKEELGNQPKKKGGLPREGIAR 952

Query: 290  CEFEKEICGNDIFIMPVLCEAAAPCFF 210
            C FE  I  +D+  +    E   PCFF
Sbjct: 953  CTFEDRILMSDLVFLRAWTEVEVPCFF 979


>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 58/147 (39%), Positives = 81/147 (55%), Gaps = 18/147 (12%)
 Frame = -3

Query: 596  CLAMFWGPLAPPHTRITVVHG---TKEVFRVAAKAVVLDPKHHLKIMKHSKWEGKFHKTL 426
            CLAMFWGPLAPP+T +  V      +  FR+ A AVVL+  H  +++K  K  G+  K +
Sbjct: 1000 CLAMFWGPLAPPNTGVVAVQNLSNNQATFRIIATAVVLEFNHAARLVKKIKLVGEPCK-I 1058

Query: 425  NERTALIK-FEPEDIDVAEFKGAPIRTESGIWGKVNKVIK--------------RKGIAT 291
             ++TALIK     D+++A F+GA ++T SGI G+V K  K              R+GIA 
Sbjct: 1059 FKKTALIKNMFTSDLEIARFEGAAVQTASGIRGQVKKAAKEELGNQPKKKGGLPREGIAR 1118

Query: 290  CEFEKEICGNDIFIMPVLCEAAAPCFF 210
            C FE  I  +D+  +    E   PCFF
Sbjct: 1119 CTFEDRILMSDLVFLRAWTEVEVPCFF 1145


>ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|222837435|gb|EEE75814.1|
            predicted protein [Populus trichocarpa]
          Length = 1181

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 55/146 (37%), Positives = 75/146 (51%), Gaps = 17/146 (11%)
 Frame = -3

Query: 596  CLAMFWGPLAPPHTRITVVHG---TKEVFRVAAKAVVLDPKHHLKIMKHSKWEGKFHKTL 426
            CLA FWGPLAPP+T +  V      +  FR+ A AVVL+  H  K++K  K  G   K  
Sbjct: 875  CLATFWGPLAPPNTGVVAVQNLANNQASFRITATAVVLEFNHAAKMVKKVKLVGHPCKIF 934

Query: 425  NERTALIKFEPEDIDVAEFKGAPIRTESGIWGKVNKVIK--------------RKGIATC 288
             +   ++     D++VA F+GA +RT SGI G+V K  K              R+GIA C
Sbjct: 935  KKTALIMNMFTSDLEVARFEGAAVRTVSGIRGQVKKAAKDEIGNQPTKKGGAPREGIARC 994

Query: 287  EFEKEICGNDIFIMPVLCEAAAPCFF 210
             FE  I  +DI  +    +  APCF+
Sbjct: 995  TFEDRILMSDIVFLRAWTQVEAPCFY 1020


>ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507881|gb|AES89023.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 1175

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 68/188 (36%), Positives = 94/188 (50%), Gaps = 42/188 (22%)
 Frame = -3

Query: 596  CLAMFWGPLAPPHTRITVVH---GTKEVFRVAAKAVVLDPKHHLKIMKHSKWEGKFHKTL 426
            CLAMFWGPLAPP+T I  V      +  FR+ A AVV++  H  +I+K  K  G +   +
Sbjct: 869  CLAMFWGPLAPPNTGIVAVQTLSNNQATFRITATAVVVEFNHAARIVKKIKLVG-YPCKI 927

Query: 425  NERTALIK-FEPEDIDVAEFKGAPIRTESGIWGKVNKVIK--------------RKGIAT 291
             ++TALIK     D++VA F+GA IRT SGI G+V KV K              ++GIA 
Sbjct: 928  FKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKVAKEEIGNQPKRKGGQIKEGIAR 987

Query: 290  CEFEKEICGNDIFIMPVLCEAAAPCFF-----------------------KRRYS-TVHV 183
            C FE +I  +DI  +    +   P F+                       +R ++  + V
Sbjct: 988  CTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPRDQTWKGMRTVAELRREHNLPIPV 1047

Query: 182  NKDSLKKK 159
            NKDSL KK
Sbjct: 1048 NKDSLYKK 1055


>ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507880|gb|AES89022.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 1200

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 68/188 (36%), Positives = 94/188 (50%), Gaps = 42/188 (22%)
 Frame = -3

Query: 596  CLAMFWGPLAPPHTRITVVH---GTKEVFRVAAKAVVLDPKHHLKIMKHSKWEGKFHKTL 426
            CLAMFWGPLAPP+T I  V      +  FR+ A AVV++  H  +I+K  K  G +   +
Sbjct: 869  CLAMFWGPLAPPNTGIVAVQTLSNNQATFRITATAVVVEFNHAARIVKKIKLVG-YPCKI 927

Query: 425  NERTALIK-FEPEDIDVAEFKGAPIRTESGIWGKVNKVIK--------------RKGIAT 291
             ++TALIK     D++VA F+GA IRT SGI G+V KV K              ++GIA 
Sbjct: 928  FKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKVAKEEIGNQPKRKGGQIKEGIAR 987

Query: 290  CEFEKEICGNDIFIMPVLCEAAAPCFF-----------------------KRRYS-TVHV 183
            C FE +I  +DI  +    +   P F+                       +R ++  + V
Sbjct: 988  CTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPRDQTWKGMRTVAELRREHNLPIPV 1047

Query: 182  NKDSLKKK 159
            NKDSL KK
Sbjct: 1048 NKDSLYKK 1055


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