BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00008667
         (840 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc...   398   e-109
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]   364   2e-98
ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arab...   317   2e-84
ref|NP_175971.3| transcription initiation factor TFIIH subunit H...   316   5e-84
ref|XP_004142720.1| PREDICTED: probable RNA polymerase II transc...   306   4e-81

>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1 [Vitis vinifera] gi|296090002|emb|CBI39821.3| unnamed
            protein product [Vitis vinifera]
          Length = 602

 Score =  398 bits (1023), Expect = e-109
 Identities = 202/279 (72%), Positives = 230/279 (82%)
 Frame = +3

Query: 3    YEQYKRTLAQDLNRHAAVVLEGRTLDMELGDTRTVAEALAKSKKADLATQMSDEKANHNR 182
            YEQY+RTL+QDLNRHAAVVLEGR +D+EL DTRTVAEALAKSK+ + A + SD      R
Sbjct: 321  YEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKRVEAANEKSDGSVTRER 380

Query: 183  SERASRMAEIEDLQTPNNLPFAPLHIKDPREYFDSQQANALKALGDTAVGTKTINCNVNT 362
             ER SRM EIEDLQ P +LPFA L IKDPR+YFDSQQANALK LGDT  G+K I C+++T
Sbjct: 381  LERISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQANALKTLGDTLAGSKQIKCSLST 440

Query: 363  AQAYGFLRKSISEMKVTGLSDPVIESEVARKVLIGLSQQLSSTKYNLGKNPQESILDRLP 542
             +AYG LR  ISE+K  GLSDP+++ ++A KVL GL+Q +SSTK++LGKNPQES+LDRLP
Sbjct: 441  QEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNISSTKFHLGKNPQESVLDRLP 500

Query: 543  KKTKEELLHFWISIQELLKHFWSSYPITTTYLNTKVSRLKDAMADIYPKLQGIKESAQSD 722
              TKEELLH W SIQELL+HFWSSYPITTTYL TK SRLKDAM+ IYPKLQ IKES QSD
Sbjct: 501  IITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLKDAMSQIYPKLQEIKESVQSD 560

Query: 723  FRHQVSLLVQPMVQALDAAFTHYDADLQKRSMRS*VR*N 839
            FRHQVSLLVQPM+QALDAAF HYDAD QKRS RS  R N
Sbjct: 561  FRHQVSLLVQPMLQALDAAFAHYDADQQKRSARSGERPN 599


>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
          Length = 735

 Score =  364 bits (934), Expect = 2e-98
 Identities = 182/254 (71%), Positives = 211/254 (83%)
 Frame = +3

Query: 3    YEQYKRTLAQDLNRHAAVVLEGRTLDMELGDTRTVAEALAKSKKADLATQMSDEKANHNR 182
            YEQY+RTL+QDLNRHAAVVLEGR +D+EL DTRTVAEALAKSK+ + A + SD      R
Sbjct: 364  YEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKRVEAANEKSDGSVTRER 423

Query: 183  SERASRMAEIEDLQTPNNLPFAPLHIKDPREYFDSQQANALKALGDTAVGTKTINCNVNT 362
             ER SRM EIEDLQ P +LPFA L IKDPR+YFDSQQANALK LGDT  G+K I C++++
Sbjct: 424  LERISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQANALKTLGDTLAGSKQIKCSLSS 483

Query: 363  AQAYGFLRKSISEMKVTGLSDPVIESEVARKVLIGLSQQLSSTKYNLGKNPQESILDRLP 542
             +AYG LR  ISE+K  GLSDP+++ ++A KVL GL+Q +SSTK++LGKNPQES+LDRLP
Sbjct: 484  QEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNISSTKFHLGKNPQESVLDRLP 543

Query: 543  KKTKEELLHFWISIQELLKHFWSSYPITTTYLNTKVSRLKDAMADIYPKLQGIKESAQSD 722
              TKEELLH W SIQELL+HFWSSYPITTTYL TK SRLKDAM+ IYPKLQ IKES QSD
Sbjct: 544  IITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLKDAMSQIYPKLQEIKESVQSD 603

Query: 723  FRHQVSLLVQPMVQ 764
            FRHQVSLLVQPM+Q
Sbjct: 604  FRHQVSLLVQPMLQ 617


>ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arabidopsis lyrata subsp.
            lyrata] gi|297340367|gb|EFH70784.1| hypothetical protein
            ARALYDRAFT_892577 [Arabidopsis lyrata subsp. lyrata]
          Length = 592

 Score =  317 bits (812), Expect = 2e-84
 Identities = 162/273 (59%), Positives = 208/273 (76%)
 Frame = +3

Query: 6    EQYKRTLAQDLNRHAAVVLEGRTLDMELGDTRTVAEALAKSKKADLATQMSDEKANHNRS 185
            +Q++R+L QDLNRHAAVVLEGR++D+E  DTR VAEAL + K+   A   + + AN  R 
Sbjct: 317  DQFRRSLLQDLNRHAAVVLEGRSIDVESEDTRIVAEALTRVKQVSKADGETTKDANLERL 376

Query: 186  ERASRMAEIEDLQTPNNLPFAPLHIKDPREYFDSQQANALKALGDTAVGTKTINCNVNTA 365
            ER SR+A +EDLQ P N P APL IKDPR+YF+SQQ N L    +   G K +  NV+  
Sbjct: 377  ERMSRLAGMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVL----NVPRGAKGLKRNVH-- 430

Query: 366  QAYGFLRKSISEMKVTGLSDPVIESEVARKVLIGLSQQLSSTKYNLGKNPQESILDRLPK 545
            +AYG L++SI E++ TGLSDP+I  EV+ +V   L++ +S+ K  +GKNP+ES LDRLPK
Sbjct: 431  EAYGLLKESILEIRATGLSDPLIRPEVSFEVFSSLTRTISTAKNIIGKNPRESFLDRLPK 490

Query: 546  KTKEELLHFWISIQELLKHFWSSYPITTTYLNTKVSRLKDAMADIYPKLQGIKESAQSDF 725
             TK+E+LH W SIQELL+HFWSSYPITTTYL+TKV +LKDAM++ Y KL+ +KES QSD 
Sbjct: 491  STKDEVLHHWTSIQELLRHFWSSYPITTTYLHTKVGKLKDAMSNTYSKLEAMKESVQSDL 550

Query: 726  RHQVSLLVQPMVQALDAAFTHYDADLQKRSMRS 824
            RHQVSLLV+PM QALDAAF HY+ADLQ+R+ +S
Sbjct: 551  RHQVSLLVRPMQQALDAAFQHYEADLQRRTAKS 583


>ref|NP_175971.3| transcription initiation factor TFIIH subunit H1 [Arabidopsis
            thaliana] gi|122215373|sp|Q3ECP0.1|TFB1A_ARATH RecName:
            Full=Probable RNA polymerase II transcription factor B
            subunit 1-1; AltName: Full=General transcription and DNA
            repair factor IIH subunit TFB1-1; Short=AtTFB1-1;
            Short=TFIIH subunit TFB1-1 gi|110741140|dbj|BAE98663.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332195172|gb|AEE33293.1| transcription initiation
            factor TFIIH subunit H1 [Arabidopsis thaliana]
          Length = 591

 Score =  316 bits (809), Expect = 5e-84
 Identities = 164/278 (58%), Positives = 209/278 (75%)
 Frame = +3

Query: 6    EQYKRTLAQDLNRHAAVVLEGRTLDMELGDTRTVAEALAKSKKADLATQMSDEKANHNRS 185
            +Q+KR+L QDLNRHAAVVLEGR++D+E  DTR VAEAL + K+   A   + + AN  R 
Sbjct: 317  DQFKRSLLQDLNRHAAVVLEGRSIDVESEDTRIVAEALTRVKQVSKADGETTKDANQERL 376

Query: 186  ERASRMAEIEDLQTPNNLPFAPLHIKDPREYFDSQQANALKALGDTAVGTKTINCNVNTA 365
            ER SR+A +EDLQ P N P APL IKDPR+YF+SQQ N L    +   G K +  NV+  
Sbjct: 377  ERMSRVAGMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVL----NVPRGAKGLKRNVH-- 430

Query: 366  QAYGFLRKSISEMKVTGLSDPVIESEVARKVLIGLSQQLSSTKYNLGKNPQESILDRLPK 545
            +AYG L++SI E++ TGLSDP+I+ EV+ +V   L++ +++ K   GKNP+ES LDRLPK
Sbjct: 431  EAYGLLKESILEIRATGLSDPLIKPEVSFEVFSSLTRTIATAKNINGKNPRESFLDRLPK 490

Query: 546  KTKEELLHFWISIQELLKHFWSSYPITTTYLNTKVSRLKDAMADIYPKLQGIKESAQSDF 725
             TK+E+LH W SIQELLKHFWSSYPITTTYL+TKV +LKDAM++ Y KL+ +KES QSD 
Sbjct: 491  STKDEVLHHWTSIQELLKHFWSSYPITTTYLHTKVGKLKDAMSNTYSKLEAMKESVQSDL 550

Query: 726  RHQVSLLVQPMVQALDAAFTHYDADLQKRSMRS*VR*N 839
            RHQVSLLV+PM QALDAAF HY+ DLQ+R+ +S  R N
Sbjct: 551  RHQVSLLVRPMQQALDAAFHHYEVDLQRRTAKSGERPN 588


>ref|XP_004142720.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Cucumis sativus]
          Length = 729

 Score =  306 bits (784), Expect = 4e-81
 Identities = 159/254 (62%), Positives = 195/254 (76%)
 Frame = +3

Query: 78   DMELGDTRTVAEALAKSKKADLATQMSDEKANHNRSERASRMAEIEDLQTPNNLPFAPLH 257
            D++L D RTVA+AL +SK A       +   +    +R SRM  IEDLQ P++ PFAPL 
Sbjct: 479  DVDLEDPRTVADALVRSKHA------VEGNESQTALDRISRMTAIEDLQAPHSHPFAPLC 532

Query: 258  IKDPREYFDSQQANALKALGDTAVGTKTINCNVNTAQAYGFLRKSISEMKVTGLSDPVIE 437
            IKDPR+YFD+QQANA+K L DT  G +   C+++T +AYG LR+SISE+K +G + P+I+
Sbjct: 533  IKDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLSTTEAYGSLRESISEIKSSGFNHPIIK 592

Query: 438  SEVARKVLIGLSQQLSSTKYNLGKNPQESILDRLPKKTKEELLHFWISIQELLKHFWSSY 617
             EVA  V  GL+Q +SSTKY LGKNPQESIL+ LP  TKEELLH WISIQELLKHFWSSY
Sbjct: 593  PEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQELLKHFWSSY 652

Query: 618  PITTTYLNTKVSRLKDAMADIYPKLQGIKESAQSDFRHQVSLLVQPMVQALDAAFTHYDA 797
            PITT+YL TKVSRLKDAMA IY +L+ IKE+  +DFRHQVSLLV+PM QALDAAF H+DA
Sbjct: 653  PITTSYLYTKVSRLKDAMAKIYRQLEEIKETVVADFRHQVSLLVRPMHQALDAAFQHHDA 712

Query: 798  DLQKRSMRS*VR*N 839
            D+QKRS++S  R N
Sbjct: 713  DMQKRSVKSGERLN 726