BLASTX nr result
ID: Papaver23_contig00008666
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00008666
(1308 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc... 580 e-163
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera] 568 e-160
ref|NP_175971.3| transcription initiation factor TFIIH subunit H... 494 e-137
ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arab... 492 e-137
ref|NP_001061583.1| Os08g0338200 [Oryza sativa Japonica Group] g... 491 e-136
>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 [Vitis vinifera] gi|296090002|emb|CBI39821.3| unnamed
protein product [Vitis vinifera]
Length = 602
Score = 580 bits (1494), Expect = e-163
Identities = 292/436 (66%), Positives = 347/436 (79%), Gaps = 1/436 (0%)
Frame = +3
Query: 3 MELRMKLLAENSELQKLHKQFVIGGVLSEAEFWVTRKKLLALDVNKMSKQRLGFKTSMLA 182
ME R+KLL E+SELQKLHKQFV+ GVL+EAEFW TRKKLL + ++ SKQR+GFK++M++
Sbjct: 128 MERRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQRVGFKSAMIS 187
Query: 183 DVRPLTDCRTNKVTFSLTPEIIQLIFTEKPAVHQAFLKFVPSKMTEMDFWTKYCRAQFLH 362
D++PLTD RTN+VTF+LTPEII IF EKPAVHQAFL FVP+KMTE DFW KYCRA++LH
Sbjct: 188 DLKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLH 247
Query: 363 RTKNXXXXXXXXXXXXXXXXFLKQDAILACEARQKIRRVDPTLDMEADEGDDYIHLPDHG 542
T+N FLK D ILA EAR+KIRRVDPTLDMEAD+GDDY+HLPDHG
Sbjct: 248 CTRNTVAAAAEAAEDEELAVFLKHDDILANEARRKIRRVDPTLDMEADQGDDYMHLPDHG 307
Query: 543 IFRDRSKEFIESEYEQYKRTLAQDLNRHAAVVLEGRTLGMGLGDTRTIAEALAKSKKVDF 722
IFRD SKE I+ +YEQY+RTL+QDLNRHAAVVLEGR + + L DTRT+AEALAKSK+V+
Sbjct: 308 IFRDGSKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKRVEA 367
Query: 723 AAQISDEKANHNRLERASRMAVIEDLQTPHNLPFAPLLIKDPREYFDSQQANALKALVDT 902
A + SD RLER SRM IEDLQ P +LPFA L IKDPR+YFDSQQANALK L DT
Sbjct: 368 ANEKSDGSVTRERLERISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQANALKTLGDT 427
Query: 903 AVGTKTINCNVNKAQAYGLLRNSISEMKVTGLSDPVIKPEIASTVLIGLSQQLSSTK-NL 1079
G+K I C+++ +AYG LR ISE+K GLSDP++KP+IA VL GL+Q +SSTK +L
Sbjct: 428 LAGSKQIKCSLSTQEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNISSTKFHL 487
Query: 1080 GKNAHERILDIFPKKTEEELLHYWISIQELLKHFWSSYPITTTYLHTKVSRLKDAMADIY 1259
GKN E +LD P T+EELLH+W SIQELL+HFWSSYPITTTYL+TK SRLKDAM+ IY
Sbjct: 488 GKNPQESVLDRLPIITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLKDAMSQIY 547
Query: 1260 SKLQGVEESAQSDFRH 1307
KLQ ++ES QSDFRH
Sbjct: 548 PKLQEIKESVQSDFRH 563
>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
Length = 735
Score = 568 bits (1465), Expect = e-160
Identities = 285/425 (67%), Positives = 338/425 (79%), Gaps = 1/425 (0%)
Frame = +3
Query: 36 SELQKLHKQFVIGGVLSEAEFWVTRKKLLALDVNKMSKQRLGFKTSMLADVRPLTDCRTN 215
SELQKLHKQFV+ GVL+EAEFW TRKKLL + ++ SKQR+GFK++M++D++PLTD RTN
Sbjct: 182 SELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQRVGFKSAMISDLKPLTDGRTN 241
Query: 216 KVTFSLTPEIIQLIFTEKPAVHQAFLKFVPSKMTEMDFWTKYCRAQFLHRTKNXXXXXXX 395
+VTF+LTPEII IF EKPAVHQAFL FVP+KMTE DFW KYCRA++LH T+N
Sbjct: 242 RVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLHCTRNTVAAAAE 301
Query: 396 XXXXXXXXXFLKQDAILACEARQKIRRVDPTLDMEADEGDDYIHLPDHGIFRDRSKEFIE 575
FLK D ILA EAR+KIRRVDPTLDMEAD+GDDY+HLPDHGIFRD SKE I+
Sbjct: 302 AAEDEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYMHLPDHGIFRDGSKEIID 361
Query: 576 SEYEQYKRTLAQDLNRHAAVVLEGRTLGMGLGDTRTIAEALAKSKKVDFAAQISDEKANH 755
+YEQY+RTL+QDLNRHAAVVLEGR + + L DTRT+AEALAKSK+V+ A + SD
Sbjct: 362 PQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKRVEAANEKSDGSVTR 421
Query: 756 NRLERASRMAVIEDLQTPHNLPFAPLLIKDPREYFDSQQANALKALVDTAVGTKTINCNV 935
RLER SRM IEDLQ P +LPFA L IKDPR+YFDSQQANALK L DT G+K I C++
Sbjct: 422 ERLERISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQANALKTLGDTLAGSKQIKCSL 481
Query: 936 NKAQAYGLLRNSISEMKVTGLSDPVIKPEIASTVLIGLSQQLSSTK-NLGKNAHERILDI 1112
+ +AYG LR ISE+K GLSDP++KP+IA VL GL+Q +SSTK +LGKN E +LD
Sbjct: 482 SSQEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNISSTKFHLGKNPQESVLDR 541
Query: 1113 FPKKTEEELLHYWISIQELLKHFWSSYPITTTYLHTKVSRLKDAMADIYSKLQGVEESAQ 1292
P T+EELLH+W SIQELL+HFWSSYPITTTYL+TK SRLKDAM+ IY KLQ ++ES Q
Sbjct: 542 LPIITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLKDAMSQIYPKLQEIKESVQ 601
Query: 1293 SDFRH 1307
SDFRH
Sbjct: 602 SDFRH 606
>ref|NP_175971.3| transcription initiation factor TFIIH subunit H1 [Arabidopsis
thaliana] gi|122215373|sp|Q3ECP0.1|TFB1A_ARATH RecName:
Full=Probable RNA polymerase II transcription factor B
subunit 1-1; AltName: Full=General transcription and DNA
repair factor IIH subunit TFB1-1; Short=AtTFB1-1;
Short=TFIIH subunit TFB1-1 gi|110741140|dbj|BAE98663.1|
hypothetical protein [Arabidopsis thaliana]
gi|332195172|gb|AEE33293.1| transcription initiation
factor TFIIH subunit H1 [Arabidopsis thaliana]
Length = 591
Score = 494 bits (1273), Expect = e-137
Identities = 256/436 (58%), Positives = 319/436 (73%), Gaps = 1/436 (0%)
Frame = +3
Query: 3 MELRMKLLAENSELQKLHKQFVIGGVLSEAEFWVTRKKLLALDVNKMSKQRLGFKTSMLA 182
+ELR KLL ENSELQ+LHKQFV VL+E EFW TRKKLL D + SKQ+LG K+ M++
Sbjct: 123 LELRFKLLRENSELQRLHKQFVESKVLTEDEFWATRKKLLGKDSIRKSKQQLGLKSMMVS 182
Query: 183 DVRPLTDCRTNKVTFSLTPEIIQLIFTEKPAVHQAFLKFVPSKMTEMDFWTKYCRAQFLH 362
++P TD RTN+VTF+LTPEII IF EKPAV QAF+ +VPSKMTE DFWTKY RA++L+
Sbjct: 183 GIKPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFINYVPSKMTEKDFWTKYFRAEYLY 242
Query: 363 RTKNXXXXXXXXXXXXXXXXFLKQDAILACEARQKIRRVDPTLDMEADEGDDYIHLPDHG 542
TKN FLK D ILA E R KIRRVDPTLDMEAD+GDDY HL DHG
Sbjct: 243 STKNTAVAAAEAAEDEELAVFLKPDEILARETRHKIRRVDPTLDMEADQGDDYTHLMDHG 302
Query: 543 IFRDRSKEFIESEYEQYKRTLAQDLNRHAAVVLEGRTLGMGLGDTRTIAEALAKSKKVDF 722
I RD + + +E + +Q+KR+L QDLNRHAAVVLEGR++ + DTR +AEAL + K+V
Sbjct: 303 IQRDGTMDVVEPQNDQFKRSLLQDLNRHAAVVLEGRSIDVESEDTRIVAEALTRVKQVSK 362
Query: 723 AAQISDEKANHNRLERASRMAVIEDLQTPHNLPFAPLLIKDPREYFDSQQANALKALVDT 902
A + + AN RLER SR+A +EDLQ P N P APL IKDPR+YF+SQQ N L +
Sbjct: 363 ADGETTKDANQERLERMSRVAGMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVL----NV 418
Query: 903 AVGTKTINCNVNKAQAYGLLRNSISEMKVTGLSDPVIKPEIASTVLIGLSQQLSSTKNL- 1079
G K + NV+ +AYGLL+ SI E++ TGLSDP+IKPE++ V L++ +++ KN+
Sbjct: 419 PRGAKGLKRNVH--EAYGLLKESILEIRATGLSDPLIKPEVSFEVFSSLTRTIATAKNIN 476
Query: 1080 GKNAHERILDIFPKKTEEELLHYWISIQELLKHFWSSYPITTTYLHTKVSRLKDAMADIY 1259
GKN E LD PK T++E+LH+W SIQELLKHFWSSYPITTTYLHTKV +LKDAM++ Y
Sbjct: 477 GKNPRESFLDRLPKSTKDEVLHHWTSIQELLKHFWSSYPITTTYLHTKVGKLKDAMSNTY 536
Query: 1260 SKLQGVEESAQSDFRH 1307
SKL+ ++ES QSD RH
Sbjct: 537 SKLEAMKESVQSDLRH 552
>ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arabidopsis lyrata subsp.
lyrata] gi|297340367|gb|EFH70784.1| hypothetical protein
ARALYDRAFT_892577 [Arabidopsis lyrata subsp. lyrata]
Length = 592
Score = 492 bits (1267), Expect = e-137
Identities = 254/436 (58%), Positives = 320/436 (73%), Gaps = 1/436 (0%)
Frame = +3
Query: 3 MELRMKLLAENSELQKLHKQFVIGGVLSEAEFWVTRKKLLALDVNKMSKQRLGFKTSMLA 182
+ELR KLL ENSELQ+LHKQFV VL+E EFW TRKKLL D + SKQ++G K+ M++
Sbjct: 123 LELRFKLLRENSELQRLHKQFVESKVLTEDEFWATRKKLLGKDSIRKSKQQVGLKSMMVS 182
Query: 183 DVRPLTDCRTNKVTFSLTPEIIQLIFTEKPAVHQAFLKFVPSKMTEMDFWTKYCRAQFLH 362
++P TD RTN+VTF+LTPEII IF EKPAV QAF+ +VPSKMTE DFWTKY RA++L+
Sbjct: 183 GIKPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFINYVPSKMTEKDFWTKYFRAEYLY 242
Query: 363 RTKNXXXXXXXXXXXXXXXXFLKQDAILACEARQKIRRVDPTLDMEADEGDDYIHLPDHG 542
TKN FLK D ILA E RQKIRRVDPTLDMEAD+GDDY HL DHG
Sbjct: 243 STKNTAVAAAEAAEDEELAVFLKPDEILARETRQKIRRVDPTLDMEADQGDDYTHLMDHG 302
Query: 543 IFRDRSKEFIESEYEQYKRTLAQDLNRHAAVVLEGRTLGMGLGDTRTIAEALAKSKKVDF 722
I RD + + +E + +Q++R+L QDLNRHAAVVLEGR++ + DTR +AEAL + K+V
Sbjct: 303 IQRDGTMDVVEPQNDQFRRSLLQDLNRHAAVVLEGRSIDVESEDTRIVAEALTRVKQVSK 362
Query: 723 AAQISDEKANHNRLERASRMAVIEDLQTPHNLPFAPLLIKDPREYFDSQQANALKALVDT 902
A + + AN RLER SR+A +EDLQ P N P APL IKDPR+YF+SQQ N L +
Sbjct: 363 ADGETTKDANLERLERMSRLAGMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVL----NV 418
Query: 903 AVGTKTINCNVNKAQAYGLLRNSISEMKVTGLSDPVIKPEIASTVLIGLSQQLSSTKN-L 1079
G K + NV+ +AYGLL+ SI E++ TGLSDP+I+PE++ V L++ +S+ KN +
Sbjct: 419 PRGAKGLKRNVH--EAYGLLKESILEIRATGLSDPLIRPEVSFEVFSSLTRTISTAKNII 476
Query: 1080 GKNAHERILDIFPKKTEEELLHYWISIQELLKHFWSSYPITTTYLHTKVSRLKDAMADIY 1259
GKN E LD PK T++E+LH+W SIQELL+HFWSSYPITTTYLHTKV +LKDAM++ Y
Sbjct: 477 GKNPRESFLDRLPKSTKDEVLHHWTSIQELLRHFWSSYPITTTYLHTKVGKLKDAMSNTY 536
Query: 1260 SKLQGVEESAQSDFRH 1307
SKL+ ++ES QSD RH
Sbjct: 537 SKLEAMKESVQSDLRH 552
>ref|NP_001061583.1| Os08g0338200 [Oryza sativa Japonica Group]
gi|38636938|dbj|BAD03200.1| unknown protein [Oryza sativa
Japonica Group] gi|113623552|dbj|BAF23497.1| Os08g0338200
[Oryza sativa Japonica Group]
gi|215686948|dbj|BAG90767.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 604
Score = 491 bits (1265), Expect = e-136
Identities = 257/436 (58%), Positives = 318/436 (72%), Gaps = 1/436 (0%)
Frame = +3
Query: 3 MELRMKLLAENSELQKLHKQFVIGGVLSEAEFWVTRKKLLALDVNKMSKQRLGFKTSMLA 182
M+ RMKLL E+SELQKLH +FV+G +L E+EFW TRK LL + NK SKQR GFK++MLA
Sbjct: 133 MQRRMKLLQEDSELQKLHMKFVLGNILQESEFWATRKNLLEDEANKGSKQRPGFKSAMLA 192
Query: 183 DVRPLTDCRTNKVTFSLTPEIIQLIFTEKPAVHQAFLKFVPSKMTEMDFWTKYCRAQFLH 362
DVRP D RTNKVTFSLT EII IF EKPAVH+AFL FVP KM+E DFWTKY RA++L
Sbjct: 193 DVRPSADGRTNKVTFSLTTEIIHQIFAEKPAVHRAFLDFVPKKMSEKDFWTKYFRAEYLL 252
Query: 363 RTKNXXXXXXXXXXXXXXXXFLKQDAILACEARQKIRRVDPTLDMEADEGDDYIHLPDHG 542
RTKN FLK D ILA EAR KI+RVDPTLDMEAD GDDYIHLPDHG
Sbjct: 253 RTKNTVAATAEAAEDEELAIFLKNDDILAKEARLKIKRVDPTLDMEADAGDDYIHLPDHG 312
Query: 543 IFRDRSKEFIESEYEQYKRTLAQDLNRHAAVVLEGRTLGMGLGDTRTIAEALAKSKKVDF 722
I RD SKE I+++ E +RTL+QDLNRHAAVVLEGR+ + L DT+T+AEA+A+SKK
Sbjct: 313 IIRDGSKETIDNDGELARRTLSQDLNRHAAVVLEGRSSDVELTDTKTVAEAIARSKKEPP 372
Query: 723 AAQISDEKANHNRLERASRMAVIEDLQTPHNLPFAPLLIKDPREYFDSQQANALKALVDT 902
++ ISD+ NH RL + +RM IEDLQ P +LP+APL IKDPREYFDSQQANAL++L
Sbjct: 373 SSSISDD-TNHERLVKVARMTEIEDLQAPRSLPYAPLCIKDPREYFDSQQANALRSLGGN 431
Query: 903 AVGTKTINCNVNKAQAYGLLRNSISEMKVTGLSDPVIKPEIASTVLIGLSQQLSSTKNLG 1082
G NC ++ A+ L IS +KV GL+ PVI+ ++A VL L++ +S ++ L
Sbjct: 432 NDGRHARNCRLSTDDAFDHLLGQISSIKVNGLNYPVIQSDVALKVLNELNEGISRSRRLN 491
Query: 1083 -KNAHERILDIFPKKTEEELLHYWISIQELLKHFWSSYPITTTYLHTKVSRLKDAMADIY 1259
KN + +L P++T +EL+ +W +IQELL+HFWSSYPITT+ L+ KV R+KDAM IY
Sbjct: 492 LKNPQDSLLGQIPRRTRDELMDHWAAIQELLQHFWSSYPITTSVLYNKVQRIKDAMTQIY 551
Query: 1260 SKLQGVEESAQSDFRH 1307
KLQ ++ESAQ D RH
Sbjct: 552 QKLQDIKESAQPDVRH 567