BLASTX nr result

ID: Papaver23_contig00008578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00008578
         (1141 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264869.2| PREDICTED: 50S ribosomal protein L19, chloro...   224   3e-56
emb|CAN82787.1| hypothetical protein VITISV_037813 [Vitis vinifera]   219   1e-54
ref|XP_002326473.1| predicted protein [Populus trichocarpa] gi|1...   217   5e-54
ref|XP_004147231.1| PREDICTED: 50S ribosomal protein L19, chloro...   201   2e-49
ref|XP_002870097.1| ribosomal protein L19 family protein [Arabid...   191   2e-46

>ref|XP_002264869.2| PREDICTED: 50S ribosomal protein L19, chloroplastic [Vitis vinifera]
            gi|296088907|emb|CBI38456.3| unnamed protein product
            [Vitis vinifera]
          Length = 231

 Score =  224 bits (571), Expect = 3e-56
 Identities = 132/233 (56%), Positives = 153/233 (65%), Gaps = 12/233 (5%)
 Frame = -3

Query: 1028 MGSKAIPQALITLPGT----PSKKLGFSTSFPAQLSTFNTNRITLSRVSSKGLSSTVKPL 861
            M SK +PQAL   P +    P KKLG ST    + S+ N NR++ SR SS   +   +P+
Sbjct: 1    MASKVLPQALFITPRSSNQWPPKKLGLSTFPSPRSSSLNLNRLSTSRFSSNSFAFHFRPI 60

Query: 860  M-STRKSFVVRAEA-------SDEVPEVESESNDIEXXXXXXXXAEKPPTTPFKPRVKLG 705
            + S ++ F+VRAEA       +DE  E E   ++ E         E  P  P KPRVKLG
Sbjct: 61   VVSPKRFFIVRAEADNEGELGADENTEEEETVSETESEVKLDAEDEAKP--PRKPRVKLG 118

Query: 704  DIMGLLNKRAVEASEKERPIPDLRSGDIVEIKLEVPENRRRQSIYKGIVISKQNXXXXXX 525
            DIMG+LNKRA+EASEKERP+PDLR+GDIVEIKLEVPENRRR SIYKGIVISKQN      
Sbjct: 119  DIMGILNKRAIEASEKERPVPDLRTGDIVEIKLEVPENRRRLSIYKGIVISKQNAGIHTT 178

Query: 524  XXXXXXXXXXXXXXVFPVYSPNIKEIKLVKHRKVRRARLYYLRDKLPRLSTFK 366
                          VFPVYSPNIKEIK+V HRKVRRARLYYLRDKLPRLSTFK
Sbjct: 179  IRVRRIIAGVGVEIVFPVYSPNIKEIKVVNHRKVRRARLYYLRDKLPRLSTFK 231


>emb|CAN82787.1| hypothetical protein VITISV_037813 [Vitis vinifera]
          Length = 231

 Score =  219 bits (558), Expect = 1e-54
 Identities = 133/234 (56%), Positives = 152/234 (64%), Gaps = 13/234 (5%)
 Frame = -3

Query: 1028 MGSKAIPQALITLPGT----PSKKLGFSTSFPAQLS-TFNTNRITLSRVSSKGLSSTVKP 864
            M SK +PQAL   P +    P KKLG ST FP+  S + N NR++ SR SS       +P
Sbjct: 1    MASKVLPQALFITPRSSNQXPPKKLGLST-FPSPRSXSLNLNRLSTSRFSSNSFXFHFRP 59

Query: 863  LM-STRKSFVVRAEAS-------DEVPEVESESNDIEXXXXXXXXAEKPPTTPFKPRVKL 708
            ++ S ++ F+V AEA        DE  E E   ++ E         E  P  P KPRVKL
Sbjct: 60   IVVSPKRFFIVXAEADNEGELGPDENTEEEETVSETESEVKLDAEDEAKP--PRKPRVKL 117

Query: 707  GDIMGLLNKRAVEASEKERPIPDLRSGDIVEIKLEVPENRRRQSIYKGIVISKQNXXXXX 528
            GDIMG+LNKRA+EASEKERP+PDLR+GDIVEIKLEVPENRRR SIYKGIVISKQN     
Sbjct: 118  GDIMGILNKRAIEASEKERPVPDLRTGDIVEIKLEVPENRRRLSIYKGIVISKQNAGIHT 177

Query: 527  XXXXXXXXXXXXXXXVFPVYSPNIKEIKLVKHRKVRRARLYYLRDKLPRLSTFK 366
                           VFPVYSPNIKEIK+V HRKVRRARLYYLRDKLPRLSTFK
Sbjct: 178  TIRVRRIIAGVGVEIVFPVYSPNIKEIKVVNHRKVRRARLYYLRDKLPRLSTFK 231


>ref|XP_002326473.1| predicted protein [Populus trichocarpa] gi|118483873|gb|ABK93827.1|
            unknown [Populus trichocarpa] gi|222833795|gb|EEE72272.1|
            predicted protein [Populus trichocarpa]
          Length = 241

 Score =  217 bits (552), Expect = 5e-54
 Identities = 129/241 (53%), Positives = 155/241 (64%), Gaps = 20/241 (8%)
 Frame = -3

Query: 1028 MGSKAIPQALITLPGTPS-----KKLGFSTSFPAQLSTFNT---NRITLSRVSSKGLSST 873
            MGSK +PQAL  +P +P+     KKLGFS++        N+   +R ++SRVSS  LSS 
Sbjct: 1    MGSKILPQALAVIPRSPTQFPVPKKLGFSSTINRSSYLSNSASSSRFSVSRVSSTSLSSN 60

Query: 872  VKPLMS--TRKSFVVRAEASDEVPEVESESNDIEXXXXXXXXAEKPPTT----------P 729
            ++      +R+SFV RAE+     EV  E+ ++E         E+              P
Sbjct: 61   LEAFFKDFSRQSFVTRAESESGGGEVVEETENVEEEVVVEGSEEEEVQAEAEVEGAVKEP 120

Query: 728  FKPRVKLGDIMGLLNKRAVEASEKERPIPDLRSGDIVEIKLEVPENRRRQSIYKGIVISK 549
             KPRVKLGDI+G+LNKRAVE SE ERPIPD+R+GDIVEIKLEVPENRRR SIYKGIVISK
Sbjct: 121  RKPRVKLGDIIGILNKRAVETSEMERPIPDIRTGDIVEIKLEVPENRRRLSIYKGIVISK 180

Query: 548  QNXXXXXXXXXXXXXXXXXXXXVFPVYSPNIKEIKLVKHRKVRRARLYYLRDKLPRLSTF 369
            QN                    VFP+YSPNIKEIK++KHRKVRRARLYYLRDKLPRLSTF
Sbjct: 181  QNAGIHTTIRIRRIIAGIGVEIVFPLYSPNIKEIKVIKHRKVRRARLYYLRDKLPRLSTF 240

Query: 368  K 366
            K
Sbjct: 241  K 241


>ref|XP_004147231.1| PREDICTED: 50S ribosomal protein L19, chloroplastic-like [Cucumis
            sativus] gi|449523724|ref|XP_004168873.1| PREDICTED: 50S
            ribosomal protein L19, chloroplastic-like [Cucumis
            sativus]
          Length = 221

 Score =  201 bits (512), Expect = 2e-49
 Identities = 115/226 (50%), Positives = 149/226 (65%), Gaps = 5/226 (2%)
 Frame = -3

Query: 1028 MGSKAIPQALITLPGTPS----KKLGFSTSFPAQLSTFNTNRITLSRVSSKGLSSTVKPL 861
            M SK +PQA+I++P  P+    ++LGF ++      +F+T  ++ S + S    +   PL
Sbjct: 1    MASKILPQAVISIPRNPNQCAPRRLGFCSAVSGTRVSFST--LSSSSIGSHFHHTVAAPL 58

Query: 860  MSTRKSFVVRAEASDEVPEVESESNDIEXXXXXXXXAEKPPTTPF-KPRVKLGDIMGLLN 684
               R++FVVRAEA+ E      E+ + E        A+     P  KPRVKLGD+MG+LN
Sbjct: 59   ---RRAFVVRAEANPEADSAAEEAPEAEVEAAVESDAQPEEEKPSRKPRVKLGDVMGILN 115

Query: 683  KRAVEASEKERPIPDLRSGDIVEIKLEVPENRRRQSIYKGIVISKQNXXXXXXXXXXXXX 504
            KRA+EASEKERPIPD+R+GDIVE+KLEV ENRRR S+Y+GIVISKQN             
Sbjct: 116  KRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRII 175

Query: 503  XXXXXXXVFPVYSPNIKEIKLVKHRKVRRARLYYLRDKLPRLSTFK 366
                   VFP+YSPNI+EI++V HRKVRRARLYYLRDKLP+LSTFK
Sbjct: 176  AGVGVEIVFPLYSPNIREIRVVSHRKVRRARLYYLRDKLPKLSTFK 221


>ref|XP_002870097.1| ribosomal protein L19 family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297315933|gb|EFH46356.1| ribosomal protein L19
            family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 225

 Score =  191 bits (486), Expect = 2e-46
 Identities = 116/224 (51%), Positives = 141/224 (62%), Gaps = 8/224 (3%)
 Frame = -3

Query: 1013 IPQALITLPGTP---SKKLGFSTSF---PAQLSTFNTNRITLSRVSSK-GLSSTVKPLMS 855
            +PQAL   P  P   SK LGFS+     P+  S  + +R++L+  SSK G S   +    
Sbjct: 8    LPQALHMTPRNPTQSSKNLGFSSFLSCAPSMNSRISVSRLSLNHSSSKFGFSLDTR---- 63

Query: 854  TRKSFVVRAEASDEVPEVESESNDIEXXXXXXXXAEKPPTTPF-KPRVKLGDIMGLLNKR 678
             RK F+VR E  +   E ESE    E         E     P  KPR+KLGD+MG+LN+R
Sbjct: 64   VRKEFIVRVEEGNT--EAESEEAVAEIADTEGNVEEVGEAKPQRKPRIKLGDVMGILNQR 121

Query: 677  AVEASEKERPIPDLRSGDIVEIKLEVPENRRRQSIYKGIVISKQNXXXXXXXXXXXXXXX 498
            A+E SEK RP+P++R+GDIVEIKLEVPEN+RR SIYKGIV+S+QN               
Sbjct: 122  AIEVSEKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAG 181

Query: 497  XXXXXVFPVYSPNIKEIKLVKHRKVRRARLYYLRDKLPRLSTFK 366
                 VFP+YSPNIKEIK+V HRKVRRARLYYLRDKLPRLSTFK
Sbjct: 182  IGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 225


Top