BLASTX nr result
ID: Papaver23_contig00007442
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00007442
(1001 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 227 4e-57
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici... 225 1e-56
ref|XP_002324295.1| rna-dependent RNA polymerase [Populus tricho... 224 2e-56
ref|XP_002308662.1| rna-dependent RNA polymerase [Populus tricho... 224 2e-56
gb|ACU17923.1| unknown [Glycine max] 224 3e-56
>ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Glycine max]
Length = 1204
Score = 227 bits (578), Expect = 4e-57
Identities = 113/186 (60%), Positives = 136/186 (73%)
Frame = +1
Query: 1 DYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKKVLGE 180
DYGA+DEKCI LAELAATAVDFPKTGK+V MP LKPK+YPDFMGKE SY+SKK+LG
Sbjct: 935 DYGALDEKCIHLAELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKERHQSYRSKKILGR 994
Query: 181 LYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCLYDGQLNA 360
LYR+IKD+ D D D L F DIPYD DLE+PGSADFI +AW++KC YDGQL+
Sbjct: 995 LYRRIKDAYD---EDIDAPYLN-FVTGDIPYDKDLEVPGSADFIADAWEQKCSYDGQLSG 1050
Query: 361 LLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXXAYNSVKREFKRVFDNLGEDSQN 540
LL Q+ VK EEEVVTG +WSMPKYN+R +Y+++K+EF+ F+ L D
Sbjct: 1051 LLGQYKVKREEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRHTFEKLNSDVGE 1110
Query: 541 LTEAEK 558
L+E EK
Sbjct: 1111 LSEEEK 1116
>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
putative [Ricinus communis]
Length = 1203
Score = 225 bits (574), Expect = 1e-56
Identities = 111/191 (58%), Positives = 136/191 (71%), Gaps = 5/191 (2%)
Frame = +1
Query: 1 DYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKKVLGE 180
+YGA+DE CIKLAELAATAVDFPKTGK+V MP LKPK+YPDFMGKED+ SY S K+LG
Sbjct: 936 EYGALDENCIKLAELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEDYQSYNSNKILGR 995
Query: 181 LYRKIKDSPDLVVGDSDKDTLAVFQV-----DDIPYDTDLEIPGSADFIREAWDRKCLYD 345
LYR++KD D D D D A DIPYD DLE+ GS+D+I +AWD+KC YD
Sbjct: 996 LYRQVKD--DYNDDDDDDDDAATSSELNLVRGDIPYDKDLEVSGSSDYILDAWDQKCSYD 1053
Query: 346 GQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXXAYNSVKREFKRVFDNLG 525
GQL LL Q+ VK EEEVVTGH+WSMPK N+R +Y+S+K+EF++VF+ +
Sbjct: 1054 GQLKGLLAQYKVKREEEVVTGHIWSMPKCNSRKQGELKERLKQSYHSLKKEFRQVFEKMD 1113
Query: 526 EDSQNLTEAEK 558
D + LTE EK
Sbjct: 1114 SDFEQLTEDEK 1124
Score = 58.2 bits (139), Expect = 3e-06
Identities = 29/57 (50%), Positives = 36/57 (63%)
Frame = +3
Query: 729 KSVELRNSDDKVATPMLSFAWVPAEYLVRIKIRRRDVRHLDMEKPINSLAGYLVGKI 899
KS+EL+ D MLSFAW+ A+YL RIKIR R +D KP+NSL YL +I
Sbjct: 1147 KSMELQEPDAAGCASMLSFAWIAADYLARIKIRCRGFDGVDTSKPVNSLVKYLADRI 1203
>ref|XP_002324295.1| rna-dependent RNA polymerase [Populus trichocarpa]
gi|222865729|gb|EEF02860.1| rna-dependent RNA polymerase
[Populus trichocarpa]
Length = 1200
Score = 224 bits (572), Expect = 2e-56
Identities = 107/186 (57%), Positives = 140/186 (75%)
Frame = +1
Query: 1 DYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKKVLGE 180
+YGA D+ C+ LAELAATAVDFPKTGKVV+MP LKPKMYPDFMGKE++ SYKS+K+LG
Sbjct: 939 EYGATDKNCLTLAELAATAVDFPKTGKVVSMPPYLKPKMYPDFMGKEEYQSYKSEKILGR 998
Query: 181 LYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCLYDGQLNA 360
LYR+IKD+ D V S + L DIPYD+DLE+ G++D+I +AWD+KC YDGQLN
Sbjct: 999 LYRQIKDAYDEDVAASSELNLVP---GDIPYDSDLEVVGASDYISDAWDQKCSYDGQLNG 1055
Query: 361 LLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXXAYNSVKREFKRVFDNLGEDSQN 540
LL Q+ VK EEEVVTGH+WSMPKY++R +YNS+K+EF+++F+ + + +
Sbjct: 1056 LLSQYKVKREEEVVTGHIWSMPKYSSRKQGELKDRLKHSYNSLKKEFRQIFEKMDLEFEQ 1115
Query: 541 LTEAEK 558
L + EK
Sbjct: 1116 LEDGEK 1121
Score = 62.8 bits (151), Expect = 1e-07
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = +3
Query: 729 KSVELRNSDDKVATPMLSFAWVPAEYLVRIKIRRRDVRHLDMEKPINSLAGYLVGKI 899
KS+EL++ D + MLSFAW+ A+YL RIKIR R+ ++D KP+NSLA YL ++
Sbjct: 1144 KSLELQDPDGAGTSVMLSFAWIAADYLARIKIRHRETGNVDSAKPVNSLAKYLADRM 1200
>ref|XP_002308662.1| rna-dependent RNA polymerase [Populus trichocarpa]
gi|222854638|gb|EEE92185.1| rna-dependent RNA polymerase
[Populus trichocarpa]
Length = 1198
Score = 224 bits (572), Expect = 2e-56
Identities = 112/190 (58%), Positives = 139/190 (73%), Gaps = 4/190 (2%)
Frame = +1
Query: 1 DYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKKVLGE 180
+YGA+DEKC+ LAELAATAVDFPKTGK+V+MP +LKPK+YPDFMGKE+ SYKSKK+LG
Sbjct: 936 EYGALDEKCLTLAELAATAVDFPKTGKIVSMPSDLKPKIYPDFMGKEEHQSYKSKKILGR 995
Query: 181 LYRKIKDSPDLVVGDSDKDTLAVFQVD----DIPYDTDLEIPGSADFIREAWDRKCLYDG 348
LYR+IKD+ D D D A +++ DIPYD DLE+ G+ DFI +AWDRKC YDG
Sbjct: 996 LYRQIKDAYD------DDDVAASSELNFVRGDIPYDLDLEVLGATDFISDAWDRKCSYDG 1049
Query: 349 QLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXXAYNSVKREFKRVFDNLGE 528
QLN LL Q+ VK EEEVVTGHVWSMPK ++R +YN +KREF++VF+ +
Sbjct: 1050 QLNGLLAQYKVKREEEVVTGHVWSMPKGSSRKQGDLKERLKHSYNCLKREFRQVFEKMDL 1109
Query: 529 DSQNLTEAEK 558
D L + EK
Sbjct: 1110 DFGQLDDDEK 1119
Score = 61.6 bits (148), Expect = 3e-07
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = +3
Query: 729 KSVELRNSDDKVATPMLSFAWVPAEYLVRIKIRRRDVRHLDMEKPINSLAGYLVGKI 899
KS+EL++SD + MLSFAW+ A+YL RIKIR + ++D KP+NSLA YL ++
Sbjct: 1142 KSLELQDSDGAGISVMLSFAWIAADYLARIKIRHSRIGNVDSAKPVNSLAKYLADRM 1198
>gb|ACU17923.1| unknown [Glycine max]
Length = 290
Score = 224 bits (571), Expect = 3e-56
Identities = 112/186 (60%), Positives = 135/186 (72%)
Frame = +1
Query: 1 DYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKKVLGE 180
DYGA+DEKCI LAELAATAVDFPKTGK+V MP LKPK+YPDFMGKE SY+SKK+LG
Sbjct: 21 DYGALDEKCIHLAELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKERHQSYRSKKILGR 80
Query: 181 LYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCLYDGQLNA 360
LYR+IKD+ D D D L F IPYD DLE+PGSADFI +AW++KC YDGQL+
Sbjct: 81 LYRRIKDAYD---EDIDAPYLN-FVTGGIPYDKDLEVPGSADFIADAWEQKCSYDGQLSG 136
Query: 361 LLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXXAYNSVKREFKRVFDNLGEDSQN 540
LL Q+ VK EEEVVTG +WSMPKYN+R +Y+++K+EF+ F+ L D
Sbjct: 137 LLGQYKVKREEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRHTFEKLNSDVGE 196
Query: 541 LTEAEK 558
L+E EK
Sbjct: 197 LSEEEK 202