BLASTX nr result

ID: Papaver23_contig00007341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00007341
         (1278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314014.1| tubulin, beta chain [Populus trichocarpa] gi...   176   1e-41
ref|NP_001042761.1| Os01g0282800 [Oryza sativa Japonica Group] g...   175   3e-41
gb|AFW79504.1| hypothetical protein ZEAMMB73_908177, partial [Ze...   175   3e-41
ref|XP_003568202.1| PREDICTED: tubulin beta-5 chain-like [Brachy...   175   3e-41
ref|XP_003567397.1| PREDICTED: tubulin beta-4 chain-like [Brachy...   175   3e-41

>ref|XP_002314014.1| tubulin, beta chain [Populus trichocarpa]
           gi|118488278|gb|ABK95958.1| unknown [Populus
           trichocarpa] gi|222850422|gb|EEE87969.1| tubulin, beta
           chain [Populus trichocarpa]
          Length = 446

 Score =  176 bits (446), Expect = 1e-41
 Identities = 98/154 (63%), Positives = 108/154 (70%), Gaps = 5/154 (3%)
 Frame = -3

Query: 862 KLFPHAVLMDLEPGTQHGL*L--YGHIFHPDNFVFWKIWCG*QLG*RTLSE---LIDSVL 698
           +  P AVLMDLEPGT   L    YG IF PDNFVF +   G        +E   LIDSVL
Sbjct: 58  RFVPRAVLMDLEPGTMDSLRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117

Query: 697 DVVEKEDEKCDRLQGLKVCHSLGG*TGFGIGTVLISKIREEYPDRMMLTFSVFPSPKGSE 518
           DVV KE E CD LQG +VCHSLGG TG G+GT+LISKIREEYPDRMMLTFSVFPSPK S+
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177

Query: 517 DTIVSLIMHPSVRQLVENADECMVLDNKASFDIC 416
             +       SV QLVENADECMVLDN+A +DIC
Sbjct: 178 TVVEPYNATLSVHQLVENADECMVLDNEALYDIC 211


>ref|NP_001042761.1| Os01g0282800 [Oryza sativa Japonica Group]
           gi|74053560|sp|Q43594.2|TBB1_ORYSJ RecName: Full=Tubulin
           beta-1 chain; AltName: Full=Beta-1-tubulin
           gi|13486716|dbj|BAB39951.1| putative tubulin beta-4
           chain [Oryza sativa Japonica Group]
           gi|15408819|dbj|BAB64211.1| putative beta-tubulin 4
           [Oryza sativa Japonica Group]
           gi|113532292|dbj|BAF04675.1| Os01g0282800 [Oryza sativa
           Japonica Group] gi|125525429|gb|EAY73543.1| hypothetical
           protein OsI_01426 [Oryza sativa Indica Group]
           gi|215768577|dbj|BAH00806.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 447

 Score =  175 bits (443), Expect = 3e-41
 Identities = 97/154 (62%), Positives = 108/154 (70%), Gaps = 5/154 (3%)
 Frame = -3

Query: 862 KLFPHAVLMDLEPGTQHGL*L--YGHIFHPDNFVFWKIWCG*QLG*RTLSE---LIDSVL 698
           +  P AVLMDLEPGT   +    YG IF PDNFVF +   G        +E   LIDSVL
Sbjct: 58  RFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117

Query: 697 DVVEKEDEKCDRLQGLKVCHSLGG*TGFGIGTVLISKIREEYPDRMMLTFSVFPSPKGSE 518
           DVV KE E CD LQG +VCHSLGG TG G+GT+LISKIREEYPDRMMLTFSVFPSPK S+
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177

Query: 517 DTIVSLIMHPSVRQLVENADECMVLDNKASFDIC 416
             +       SV QLVENADECMVLDN+A +DIC
Sbjct: 178 TVVEPYNATLSVHQLVENADECMVLDNEALYDIC 211


>gb|AFW79504.1| hypothetical protein ZEAMMB73_908177, partial [Zea mays]
          Length = 447

 Score =  175 bits (443), Expect = 3e-41
 Identities = 97/154 (62%), Positives = 108/154 (70%), Gaps = 5/154 (3%)
 Frame = -3

Query: 862 KLFPHAVLMDLEPGTQHGL*L--YGHIFHPDNFVFWKIWCG*QLG*RTLSE---LIDSVL 698
           +  P AVLMDLEPGT   +    YG IF PDNFVF +   G        +E   LIDSVL
Sbjct: 58  RFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117

Query: 697 DVVEKEDEKCDRLQGLKVCHSLGG*TGFGIGTVLISKIREEYPDRMMLTFSVFPSPKGSE 518
           DVV KE E CD LQG +VCHSLGG TG G+GT+LISKIREEYPDRMMLTFSVFPSPK S+
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177

Query: 517 DTIVSLIMHPSVRQLVENADECMVLDNKASFDIC 416
             +       SV QLVENADECMVLDN+A +DIC
Sbjct: 178 TVVEPYNATLSVHQLVENADECMVLDNEALYDIC 211


>ref|XP_003568202.1| PREDICTED: tubulin beta-5 chain-like [Brachypodium distachyon]
          Length = 447

 Score =  175 bits (443), Expect = 3e-41
 Identities = 97/154 (62%), Positives = 108/154 (70%), Gaps = 5/154 (3%)
 Frame = -3

Query: 862 KLFPHAVLMDLEPGTQHGL*L--YGHIFHPDNFVFWKIWCG*QLG*RTLSE---LIDSVL 698
           +  P AVLMDLEPGT   +    YG IF PDNFVF +   G        +E   LIDSVL
Sbjct: 58  RFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117

Query: 697 DVVEKEDEKCDRLQGLKVCHSLGG*TGFGIGTVLISKIREEYPDRMMLTFSVFPSPKGSE 518
           DVV KE E CD LQG +VCHSLGG TG G+GT+LISKIREEYPDRMMLTFSVFPSPK S+
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177

Query: 517 DTIVSLIMHPSVRQLVENADECMVLDNKASFDIC 416
             +       SV QLVENADECMVLDN+A +DIC
Sbjct: 178 TVVEPYNATLSVHQLVENADECMVLDNEALYDIC 211


>ref|XP_003567397.1| PREDICTED: tubulin beta-4 chain-like [Brachypodium distachyon]
          Length = 446

 Score =  175 bits (443), Expect = 3e-41
 Identities = 97/154 (62%), Positives = 108/154 (70%), Gaps = 5/154 (3%)
 Frame = -3

Query: 862 KLFPHAVLMDLEPGTQHGL*L--YGHIFHPDNFVFWKIWCG*QLG*RTLSE---LIDSVL 698
           +  P AVLMDLEPGT   +    YG IF PDNFVF +   G        +E   LIDSVL
Sbjct: 58  RFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117

Query: 697 DVVEKEDEKCDRLQGLKVCHSLGG*TGFGIGTVLISKIREEYPDRMMLTFSVFPSPKGSE 518
           DVV KE E CD LQG +VCHSLGG TG G+GT+LISKIREEYPDRMMLTFSVFPSPK S+
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177

Query: 517 DTIVSLIMHPSVRQLVENADECMVLDNKASFDIC 416
             +       SV QLVENADECMVLDN+A +DIC
Sbjct: 178 TVVEPYNATLSVHQLVENADECMVLDNEALYDIC 211


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