BLASTX nr result

ID: Papaver23_contig00007202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00007202
         (1111 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helica...   350   5e-94
emb|CBI22072.3| unnamed protein product [Vitis vinifera]              348   1e-93
ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|2...   340   4e-91
ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinu...   339   6e-91
ref|XP_004147777.1| PREDICTED: probable ATP-dependent RNA helica...   339   8e-91

>ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Vitis
            vinifera]
          Length = 1231

 Score =  350 bits (897), Expect = 5e-94
 Identities = 185/343 (53%), Positives = 244/343 (71%), Gaps = 4/343 (1%)
 Frame = -2

Query: 1020 RMSGRRKRSSNYKIPNVNEATRIRITQALEDFTNSDDSPVLTFDAGMTNFERAAVHRLCR 841
            R   +R++      P V E TRIRI++AL++F  + +  V TF+A +TN ERA VH +CR
Sbjct: 3    RSGKKRQKDGEQNNPGVAEGTRIRISRALQEFRETHNE-VYTFEANLTNHERAVVHEVCR 61

Query: 840  KYGLKSKSSGVGDTRQISVYKPTGGKDGMFRKKGKKNISLEFSDESKAYLRDLFSRYPPK 661
            K G+ SKSSG G  R++SVYK    K  +  KK + N  L FS+E+K  L DLF+RYPP 
Sbjct: 62   KMGMTSKSSGRGSQRRVSVYKT---KKKVDTKKEEGNPYLNFSEEAKEVLLDLFTRYPPD 118

Query: 660  EDELNSVQPKKHNASADNRLRKNDDSLCRPCMDKAKFQEKVKA-AFELKNHPKHKQIQEA 484
            + E+ +   +  +   +    K DD   RP M+KA+  +KV+  A  ++  P  +QI E 
Sbjct: 119  DKEMVTQMVENGSGKTEKIWGKKDDIFGRPSMNKAEIAKKVELLASRIEEDPHLRQITEG 178

Query: 483  RSKLPIAVFQESIVSTVESNQVVLISGETGCGKTTQLPQYLLDYMWGKGEQCKILCTQPR 304
            RSKLPIA F++ I ST+ES+QVVLISGETGCGKTTQ+PQ++LDYMWGKGE CKI+CTQPR
Sbjct: 179  RSKLPIASFKDVITSTIESHQVVLISGETGCGKTTQVPQFVLDYMWGKGEACKIVCTQPR 238

Query: 303  RISAISVAERISWERGENVGETAGYKIRMETKGGKNSSVMFCTNGILLRVLVERGNG--- 133
            RISA SVAERIS+E+GENVG++ GYKIR+E+KGG++SS++FCTNGILLRVLV +G     
Sbjct: 239  RISATSVAERISFEKGENVGDSVGYKIRLESKGGRHSSIIFCTNGILLRVLVSKGTDRLK 298

Query: 132  TGAKDENWKSRVSEFTHIVVDEIHERDHHSDFILTILRDLLPS 4
              A  +  K  +S+ THI+VDEIHERD +SDF+L ILRD+L S
Sbjct: 299  PEALRKAAKRDISDITHIIVDEIHERDRYSDFMLAILRDMLAS 341


>emb|CBI22072.3| unnamed protein product [Vitis vinifera]
          Length = 1190

 Score =  348 bits (894), Expect = 1e-93
 Identities = 183/340 (53%), Positives = 241/340 (70%), Gaps = 1/340 (0%)
 Frame = -2

Query: 1020 RMSGRRKRSSNYKIPNVNEATRIRITQALEDFTNSDDSPVLTFDAGMTNFERAAVHRLCR 841
            R   +R++      P V E TRIRI++AL++F  + +  V TF+A +TN ERA VH +CR
Sbjct: 3    RSGKKRQKDGEQNNPGVAEGTRIRISRALQEFRETHNE-VYTFEANLTNHERAVVHEVCR 61

Query: 840  KYGLKSKSSGVGDTRQISVYKPTGGKDGMFRKKGKKNISLEFSDESKAYLRDLFSRYPPK 661
            K G+ SKSSG G  R++SVYK    K  +  KK + N  L FS+E+K  L DLF+RYPP 
Sbjct: 62   KMGMTSKSSGRGSQRRVSVYKT---KKKVDTKKEEGNPYLNFSEEAKEVLLDLFTRYPPD 118

Query: 660  EDELNSVQPKKHNASADNRLRKNDDSLCRPCMDKAKFQEKVKA-AFELKNHPKHKQIQEA 484
            + E+ +   +  +   +    K DD   RP M+KA+  +KV+  A  ++  P  +QI E 
Sbjct: 119  DKEMVTQMVENGSGKTEKIWGKKDDIFGRPSMNKAEIAKKVELLASRIEEDPHLRQITEG 178

Query: 483  RSKLPIAVFQESIVSTVESNQVVLISGETGCGKTTQLPQYLLDYMWGKGEQCKILCTQPR 304
            RSKLPIA F++ I ST+ES+QVVLISGETGCGKTTQ+PQ++LDYMWGKGE CKI+CTQPR
Sbjct: 179  RSKLPIASFKDVITSTIESHQVVLISGETGCGKTTQVPQFVLDYMWGKGEACKIVCTQPR 238

Query: 303  RISAISVAERISWERGENVGETAGYKIRMETKGGKNSSVMFCTNGILLRVLVERGNGTGA 124
            RISA SVAERIS+E+GENVG++ GYKIR+E+KGG++SS++FCTNGILLRVLV +G     
Sbjct: 239  RISATSVAERISFEKGENVGDSVGYKIRLESKGGRHSSIIFCTNGILLRVLVSKGTDRD- 297

Query: 123  KDENWKSRVSEFTHIVVDEIHERDHHSDFILTILRDLLPS 4
                    +S+ THI+VDEIHERD +SDF+L ILRD+L S
Sbjct: 298  --------ISDITHIIVDEIHERDRYSDFMLAILRDMLAS 329


>ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|222857018|gb|EEE94565.1|
            predicted protein [Populus trichocarpa]
          Length = 1195

 Score =  340 bits (872), Expect = 4e-91
 Identities = 180/336 (53%), Positives = 241/336 (71%), Gaps = 2/336 (0%)
 Frame = -2

Query: 1005 RKRSSNYKIPNVNEATRIRITQALEDFTNSDDSPVLTFDAGMTNFERAAVHRLCRKYGLK 826
            +++++  + P V EAT IRI++ LE F  + D  V TF+A ++N++RA VH +C+K G+K
Sbjct: 6    QRKAAQQQNPRVAEATLIRISKILERFRAAPDQ-VYTFEANLSNYDRAVVHEVCKKMGMK 64

Query: 825  SKSSGVGDTRQISVYKPTGGKDGMFRKKGKKNIS-LEFSDESKAYLRDLFSRYPPKEDEL 649
            SKSSG G  R++SVYK T   D +   KGK+N++ L FS ESK  L +LFS YPP+E   
Sbjct: 65   SKSSGRGGQRRVSVYKNTKKLDDV---KGKENLTHLTFSGESKMVLGELFSNYPPEEGGF 121

Query: 648  NSVQPKKHNASADNRLRKNDDSLCRPCMDKAKFQEKVKA-AFELKNHPKHKQIQEARSKL 472
             +    KH+ +A     K DD   +P   KA+  +KV++ A  ++   K KQI E RSKL
Sbjct: 122  GAELEGKHSGTAGKTREKKDDIFSKPSRKKAEIAKKVESFASRIEKDVKLKQIVEGRSKL 181

Query: 471  PIAVFQESIVSTVESNQVVLISGETGCGKTTQLPQYLLDYMWGKGEQCKILCTQPRRISA 292
            PIA F + I ST+ES+QVVLISGETGCGKTTQ+PQ+LLD+MWGKGE CKI+CTQPRRISA
Sbjct: 182  PIASFMDVITSTIESHQVVLISGETGCGKTTQVPQFLLDHMWGKGEACKIVCTQPRRISA 241

Query: 291  ISVAERISWERGENVGETAGYKIRMETKGGKNSSVMFCTNGILLRVLVERGNGTGAKDEN 112
            ISV+ERIS+ERGENVG++ GYKIR+E+KGGK+SS++FCTNG+LLR+LV +G      + N
Sbjct: 242  ISVSERISYERGENVGDSVGYKIRLESKGGKHSSIVFCTNGVLLRILVSKGITGSQNEAN 301

Query: 111  WKSRVSEFTHIVVDEIHERDHHSDFILTILRDLLPS 4
              ++ +       DEIHERD  SDF+L I+RD+LPS
Sbjct: 302  TAAKEN-------DEIHERDRFSDFMLAIIRDILPS 330


>ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223540442|gb|EEF42011.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1229

 Score =  339 bits (870), Expect = 6e-91
 Identities = 185/342 (54%), Positives = 238/342 (69%), Gaps = 4/342 (1%)
 Frame = -2

Query: 1017 MSGRRKRSSNYKIPNVNEATRIRITQALEDFTNSDDSPVLTFDAGMTNFERAAVHRLCRK 838
            M  +R++ +    PNV EATRIRI+Q LE F  + D  V TF+A ++N ERA VH +C+K
Sbjct: 1    MGKKRQKKAEQGNPNVAEATRIRISQILEQFRAAKDQ-VFTFEANLSNRERAVVHEVCKK 59

Query: 837  YGLKSKSSGVGDTRQISVYKPTGGKDGMFRKKGKKNIS-LEFSDESKAYLRDLFSRYPPK 661
             G+KSKS+G G  R++S+YK     D      GK++++ L FS+ESK  L++LF+ YPP+
Sbjct: 60   LGMKSKSTGRGHQRRVSIYKIIQKAD---TGNGKESLTNLTFSEESKLVLQELFAYYPPE 116

Query: 660  EDELNSVQPKKHNASADNRLRKNDDSLCRPCMDKAKFQEKVKAA-FELKNHPKHKQIQEA 484
            + EL +       A       K D     P M KA   +KV++    ++     +QI E 
Sbjct: 117  DGELGAKIVGNCKAKDSIIQGKKDGIFSMPSMAKADITKKVESLNSRIEKDANLRQIVEQ 176

Query: 483  RSKLPIAVFQESIVSTVESNQVVLISGETGCGKTTQLPQYLLDYMWGKGEQCKILCTQPR 304
            RSKLPIA F++ I STVES+Q+VLISGETGCGKTTQ+PQYLL+Y WGK E CKI+CTQPR
Sbjct: 177  RSKLPIASFRDVITSTVESHQIVLISGETGCGKTTQVPQYLLEYKWGKCEACKIICTQPR 236

Query: 303  RISAISVAERISWERGENVGETAGYKIRMETKGGKNSSVMFCTNGILLRVLVERGNGTGA 124
            RISAISVAERIS ERGENVG+  GYKIR+E+KGGKNSS++ CTNG+LLR+LV RG     
Sbjct: 237  RISAISVAERISSERGENVGDDIGYKIRLESKGGKNSSIVLCTNGVLLRLLVSRGTRRSK 296

Query: 123  K--DENWKSRVSEFTHIVVDEIHERDHHSDFILTILRDLLPS 4
            K   +N K  +S  THI+VDEIHERD +SDFIL I+RD+LPS
Sbjct: 297  KKSSKNAKDDISNITHIIVDEIHERDRYSDFILAIIRDILPS 338


>ref|XP_004147777.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
            sativus]
          Length = 1230

 Score =  339 bits (869), Expect = 8e-91
 Identities = 183/340 (53%), Positives = 235/340 (69%), Gaps = 5/340 (1%)
 Frame = -2

Query: 1008 RRKRSSNYKIPN--VNEATRIRITQALEDFTNSDDSPVLTFDAGMTNFERAAVHRLCRKY 835
            ++K+    + P   +N      ITQAL+ F  + D  V TF+A ++  ERA VH +CRK 
Sbjct: 3    KKKQKKGVQKPKCKLNSNVGSAITQALQRFCLTHDE-VFTFEADLSKRERALVHEVCRKM 61

Query: 834  GLKSKSSGVGDTRQISVYKPTGGKDGMFRKKGKKNISLEFSDESKAYLRDLFSRYPPKED 655
            G+ SKSSG GD R++SVYK     +           +++FS+++K  L DLFS YPP + 
Sbjct: 62   GMTSKSSGHGDQRRVSVYKSKLQME-----------TVKFSEKTKTVLDDLFSMYPPDDG 110

Query: 654  ELNSVQPKKHNASADNRLRKNDDSLCRPCMDKAKFQEKVKAAFELKNHPKHKQIQEARSK 475
            EL       H+  AD   R+ DD   RP M K +  +KV  ++ LKN    K++   RSK
Sbjct: 111  ELGKETVGNHHKKADKPRRRKDDIFWRPSMTKEELTKKV-GSYTLKNVANMKKVSLKRSK 169

Query: 474  LPIAVFQESIVSTVESNQVVLISGETGCGKTTQLPQYLLDYMWGKGEQCKILCTQPRRIS 295
            LPIA F++ I STVES+QVVLISGETGCGKTTQ+PQ+LLDYMWGKGE CKI+CTQPRRIS
Sbjct: 170  LPIASFEDVITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRIS 229

Query: 294  AISVAERISWERGENVGETAGYKIRMETKGGKNSSVMFCTNGILLRVLVERGNGTGAKDE 115
            A+SV+ERIS+ERGENVG   GYKIR+E+KGG++SS++ CTNGILLRVL+  G G    + 
Sbjct: 230  AVSVSERISYERGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEA 289

Query: 114  NWKSR---VSEFTHIVVDEIHERDHHSDFILTILRDLLPS 4
            + KSR   VS+ THI+VDE+HERD +SDFILTILRDLLPS
Sbjct: 290  SRKSRKNVVSDLTHIIVDEVHERDRYSDFILTILRDLLPS 329