BLASTX nr result

ID: Papaver23_contig00007072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00007072
         (975 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512872.1| translocon-associated protein, beta subunit ...   174   4e-41
ref|XP_002274610.2| PREDICTED: translocon-associated protein sub...   171   2e-40
ref|XP_002274525.1| PREDICTED: translocon-associated protein sub...   171   2e-40
ref|XP_002871597.1| translocon-associated protein beta family pr...   168   2e-39
ref|XP_004145695.1| PREDICTED: translocon-associated protein sub...   166   6e-39

>ref|XP_002512872.1| translocon-associated protein, beta subunit precursor, putative
           [Ricinus communis] gi|223547883|gb|EEF49375.1|
           translocon-associated protein, beta subunit precursor,
           putative [Ricinus communis]
          Length = 208

 Score =  174 bits (440), Expect = 4e-41
 Identities = 96/192 (50%), Positives = 119/192 (61%)
 Frame = -3

Query: 829 VMMCLLSISATFASSDSPFIVANKKVSLNRLKSGIERVSVSIDIYNQGSATAYDVSLTDG 650
           +++ L  IS+T ASSD PFIVA+KK +LNRLKSG ERVSVSIDIYNQGS+TAYDVSL D 
Sbjct: 9   LLVALFLISSTSASSDVPFIVAHKKATLNRLKSGAERVSVSIDIYNQGSSTAYDVSLLDD 68

Query: 649 EWSPSIFNLVSGNTSKSWEKLDVGSVVSHSFVLESNVKGVYHASPAVIKFRTPTKAXXXX 470
            W   IF+++SGNTS+SWE+LDVG ++SH+F LE  VKG+++ SPAV+ FR PTKA    
Sbjct: 69  HWPQDIFDVISGNTSQSWERLDVGGILSHTFELEGKVKGLFYGSPAVVTFRIPTKA---- 124

Query: 469 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKYGSLVSVLT 290
                                                           LAKYGSL+SV++
Sbjct: 125 -------------------ALQEAFSTPILPLDVLAERPPEKKFEWRLLAKYGSLISVIS 165

Query: 289 IVVSFIYLVASP 254
           IVV F+YLVASP
Sbjct: 166 IVVLFVYLVASP 177


>ref|XP_002274610.2| PREDICTED: translocon-associated protein subunit beta isoform 2
           [Vitis vinifera]
          Length = 189

 Score =  171 bits (434), Expect = 2e-40
 Identities = 96/194 (49%), Positives = 117/194 (60%)
 Frame = -3

Query: 835 ISVMMCLLSISATFASSDSPFIVANKKVSLNRLKSGIERVSVSIDIYNQGSATAYDVSLT 656
           ISV++ L+ +S+T  SSD PFIVA+KK SL RLKSG ERVSVSIDIYNQGS TAYDVSLT
Sbjct: 6   ISVVVALILVSSTLGSSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSTTAYDVSLT 65

Query: 655 DGEWSPSIFNLVSGNTSKSWEKLDVGSVVSHSFVLESNVKGVYHASPAVIKFRTPTKAXX 476
           D  WS  +FN+VSGNTS SWE+LD G ++SH+F LES V+G+++ +PAVI FR PT A  
Sbjct: 66  DDSWSQDVFNIVSGNTSTSWERLDAGGLLSHAFELESKVEGMFYGAPAVITFRIPTTA-- 123

Query: 475 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKYGSLVSV 296
                                                             LAKYGS +SV
Sbjct: 124 ---------------------ALQEAYSTPILPLDILAVRPPEKKFEWRLLAKYGSQISV 162

Query: 295 LTIVVSFIYLVASP 254
           ++IV  F+YLVASP
Sbjct: 163 ISIVSVFVYLVASP 176


>ref|XP_002274525.1| PREDICTED: translocon-associated protein subunit beta isoform 1
           [Vitis vinifera]
          Length = 191

 Score =  171 bits (434), Expect = 2e-40
 Identities = 96/194 (49%), Positives = 117/194 (60%)
 Frame = -3

Query: 835 ISVMMCLLSISATFASSDSPFIVANKKVSLNRLKSGIERVSVSIDIYNQGSATAYDVSLT 656
           ISV++ L+ +S+T  SSD PFIVA+KK SL RLKSG ERVSVSIDIYNQGS TAYDVSLT
Sbjct: 6   ISVVVALILVSSTLGSSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSTTAYDVSLT 65

Query: 655 DGEWSPSIFNLVSGNTSKSWEKLDVGSVVSHSFVLESNVKGVYHASPAVIKFRTPTKAXX 476
           D  WS  +FN+VSGNTS SWE+LD G ++SH+F LES V+G+++ +PAVI FR PT A  
Sbjct: 66  DDSWSQDVFNIVSGNTSTSWERLDAGGLLSHAFELESKVEGMFYGAPAVITFRIPTTA-- 123

Query: 475 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKYGSLVSV 296
                                                             LAKYGS +SV
Sbjct: 124 -------------------ALQEAYSTPILPLDILAVRPPEKKFEWAKRLLAKYGSQISV 164

Query: 295 LTIVVSFIYLVASP 254
           ++IV  F+YLVASP
Sbjct: 165 ISIVSVFVYLVASP 178


>ref|XP_002871597.1| translocon-associated protein beta family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297317434|gb|EFH47856.1|
           translocon-associated protein beta family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 195

 Score =  168 bits (425), Expect = 2e-39
 Identities = 92/194 (47%), Positives = 117/194 (60%)
 Frame = -3

Query: 835 ISVMMCLLSISATFASSDSPFIVANKKVSLNRLKSGIERVSVSIDIYNQGSATAYDVSLT 656
           IS M   + +SA+FA+S+ PF+V +KK +LNRLKSG ERVSVS DIYNQGS+TAYDV+LT
Sbjct: 10  ISAMAVFMLVSASFATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGSSTAYDVTLT 69

Query: 655 DGEWSPSIFNLVSGNTSKSWEKLDVGSVVSHSFVLESNVKGVYHASPAVIKFRTPTKAXX 476
           D  W  + F +V+GNTSKSWE+LD G ++SHSF LE+ VKGV++ +PAV+ FR PTK   
Sbjct: 70  DNSWDKATFEVVNGNTSKSWERLDAGGILSHSFELEAKVKGVFYGAPAVVTFRIPTK--- 126

Query: 475 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKYGSLVSV 296
                                                             LAKYGSLVSV
Sbjct: 127 ------------------PALQEAYSTPLLPLDILADKPPTKILDVAKRLLAKYGSLVSV 168

Query: 295 LTIVVSFIYLVASP 254
           +++VV FIYLVA+P
Sbjct: 169 ISMVVLFIYLVATP 182


>ref|XP_004145695.1| PREDICTED: translocon-associated protein subunit beta-like isoform
           1 [Cucumis sativus] gi|449455916|ref|XP_004145696.1|
           PREDICTED: translocon-associated protein subunit
           beta-like isoform 2 [Cucumis sativus]
           gi|449492917|ref|XP_004159140.1| PREDICTED:
           translocon-associated protein subunit beta-like isoform
           1 [Cucumis sativus] gi|449492920|ref|XP_004159141.1|
           PREDICTED: translocon-associated protein subunit
           beta-like isoform 2 [Cucumis sativus]
          Length = 190

 Score =  166 bits (421), Expect = 6e-39
 Identities = 94/194 (48%), Positives = 114/194 (58%)
 Frame = -3

Query: 835 ISVMMCLLSISATFASSDSPFIVANKKVSLNRLKSGIERVSVSIDIYNQGSATAYDVSLT 656
           I ++   L +S+T A+SD PFIVA+KK SL RLKSG ERVSVSIDIYNQGS+TAYDVSL 
Sbjct: 6   IHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLN 65

Query: 655 DGEWSPSIFNLVSGNTSKSWEKLDVGSVVSHSFVLESNVKGVYHASPAVIKFRTPTKAXX 476
           D  W   +F++VSG TS SWE+LD G  VSHSF LE+  +G++H SPAVI FR PTK+  
Sbjct: 66  DASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVPTKS-- 123

Query: 475 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKYGSLVSV 296
                                                             LAKYGSL+SV
Sbjct: 124 -------------------ALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISV 164

Query: 295 LTIVVSFIYLVASP 254
           ++I+V FIYLVASP
Sbjct: 165 VSIIVLFIYLVASP 178


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