BLASTX nr result
ID: Papaver23_contig00006844
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00006844
(717 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2... 67 2e-13
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas... 63 1e-11
emb|CAN63923.1| hypothetical protein VITISV_004023 [Vitis vinifera] 60 1e-11
emb|CAN65459.1| hypothetical protein VITISV_032015 [Vitis vinifera] 58 4e-11
emb|CAN73852.1| hypothetical protein VITISV_000114 [Vitis vinifera] 57 3e-10
>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
predicted protein [Populus trichocarpa]
Length = 819
Score = 67.4 bits (163), Expect(2) = 2e-13
Identities = 43/146 (29%), Positives = 72/146 (49%)
Frame = +1
Query: 22 INKCDLMDLWFTDYTYTWNNHRDDSQN*H*TKTR*GLVNSKCNKKFLNSSIKHLGPLDFD 201
I + + DL ++ YTW+N + N K LVN K N KF S + L D
Sbjct: 546 IREAKVDDLRYSGMHYTWSNQCPE--NLIMRKLDRVLVNEKWNLKFPLSEARFLPSGMSD 603
Query: 202 HVPIKLNTYNYWNDGATSFKYFREWMKYEECKLLIQRIW*KNVKGSPAHKLNTKLGIVKH 381
H P+ + + F++F WM ++E L++++W +N +G P ++L KL +K
Sbjct: 604 HSPMVVKVIGNDQNKKKPFRFFDMWMDHDEFMPLVKKVWDQNSRGCPMYQLCCKLRKLKQ 663
Query: 382 ILRLWNKNSFGNIQSNIDNFKKEMKR 459
L+L+N F NI + + K +M +
Sbjct: 664 ELKLFNMAHFSNISDRVRDAKNKMDK 689
Score = 33.9 bits (76), Expect(2) = 2e-13
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Frame = +2
Query: 518 KDLARWYA----IKEKFCKDKSRDQNIALGDRNTRYFH 619
+D+ YA +E F K K+R Q ++LGD+NT YFH
Sbjct: 708 RDVVHKYASTVRAEESFFKQKARIQWLSLGDQNTSYFH 745
>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
H; Endonuclease/exonuclease/phosphatase [Medicago
truncatula]
Length = 1246
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Frame = +1
Query: 67 YTWNNHRDDSQN*H*TKTR*GLVNSKCNKKFLN----SSIKHLGPLDF-----DHVPIKL 219
YTW+N R S N L + CN++++N SS LG DH P+ +
Sbjct: 180 YTWSNGRLGSDN-----VALRLDRAICNEEWVNFWRSSSCSALGNSALVRHQSDHHPLLM 234
Query: 220 NTYNYWNDGATSFKYFREWMKYEECKLLIQRIW*KNVKGSPAHKLNTKLGIVKHILRLWN 399
+ + + +FK+F+ W ++E+C+ ++ W K+ +G +L KL +K + R WN
Sbjct: 235 SMDFCTSQRSGNFKFFKTWTEHEDCRRIVAENWSKHTRGHGMTRLQAKLKHMKQVFRHWN 294
Query: 400 KNSFGNIQSNIDNFKKEMKR 459
+ FG++ + +E+ R
Sbjct: 295 RTVFGDVDRKVRMAVEEVNR 314
Score = 32.3 bits (72), Expect(2) = 1e-11
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 545 KEKFCKDKSRDQNIALGDRNTRYFHNKAK 631
+++ ++K RDQ GDRNT YFH +K
Sbjct: 346 QDELWREKLRDQRFIHGDRNTAYFHRISK 374
>emb|CAN63923.1| hypothetical protein VITISV_004023 [Vitis vinifera]
Length = 1081
Score = 59.7 bits (143), Expect(2) = 1e-11
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Frame = +1
Query: 1 VRIFNKLINKCDLMDLWFTDYTYTWNNHRDDSQN*H*TKTR*GLVNSKCNKKFLNSSIKH 180
+R F ++++ L+DL +TW ++ + LV+ +F S +
Sbjct: 565 MRRFAEVVDDLGLVDLQLQGGAFTWTGGLNNMSK---ARLDRFLVSPCWLDQFSRVSQRR 621
Query: 181 LGPLDFDHVPIKLNTYNYWNDGATSFKYFREWMKYEECKLLIQRIW*-KNVKGSPAHKLN 357
L DH P+ L + W G F++ W K E K LI+ W V+GS + +L+
Sbjct: 622 LPRPISDHFPVLLEGGS-WRRGPAPFRFENMWFKVEGFKDLIRNWWQGTEVRGSASFRLS 680
Query: 358 TKLGIVKHILRLWNKNSFGNIQSN 429
KL VK L++WN+ FGN++SN
Sbjct: 681 EKLKKVKQKLKVWNREEFGNLESN 704
Score = 35.8 bits (81), Expect(2) = 1e-11
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 527 ARWYAIKEKFCKDKSRDQNIALGDRNTRYFHNKA 628
A+W ++E + SR+ + GDRNTRYFH A
Sbjct: 740 AKWVELEETHWRQVSRELWLKAGDRNTRYFHRMA 773
>emb|CAN65459.1| hypothetical protein VITISV_032015 [Vitis vinifera]
Length = 1331
Score = 57.8 bits (138), Expect(2) = 4e-11
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
Frame = +1
Query: 1 VRIFNKLINKCDLMDLWFTDYTYTWNNHRDDSQN*H*TKTR*GLVNSKCNKKFLNSSIKH 180
+R F +++++ L+DL +TW+ + + LV+ +F S +
Sbjct: 679 MRRFAEVVDELGLVDLQLQGGAFTWSGGLNSLSK---ARLDRFLVSPCWLDQFSRVSQRR 735
Query: 181 LGPLDFDHVPIKLNTYNYWNDGATSFKYFREWMKYEECKLLIQRIW*K-NVKGSPAHKLN 357
L +H P+ L + W G F++ W K E K LI+ W V+GS + +L+
Sbjct: 736 LPKPTSNHFPVLLEGGS-WRRGLAPFRFENMWFKVEGFKDLIRSWWWGIEVRGSASFRLS 794
Query: 358 TKLGIVKHILRLWNKNSFGNIQSN 429
KL +K L++WN+ FGN++SN
Sbjct: 795 AKLKELKQKLKVWNREKFGNLESN 818
Score = 35.8 bits (81), Expect(2) = 4e-11
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 515 RKDLARWYAIKEKFCKDKSRDQNIALGDRNTRYFHNKA 628
++D A+W ++E + SR+ + GDRNT YFH A
Sbjct: 850 KEDYAKWVDLEETHWRQVSRELWLKAGDRNTGYFHRMA 887
>emb|CAN73852.1| hypothetical protein VITISV_000114 [Vitis vinifera]
Length = 510
Score = 57.4 bits (137), Expect(2) = 3e-10
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +1
Query: 199 DHVPIKLNTYNYWNDGATSFKYFREWMKYEECKLLIQRIW*KNV-KGSPAHKLNTKLGIV 375
DH P+ L + W+ G F++ W K E K LI+ W + V +G + +L+ KL ++
Sbjct: 54 DHFPVLLEGGS-WSRGPAPFRFENMWFKVEGFKELIRNWWQETVVRGXASFRLSEKLKVL 112
Query: 376 KHILRLWNKNSFGNIQSN 429
K L++WN+ FGN++SN
Sbjct: 113 KQKLKIWNREEFGNLESN 130
Score = 33.5 bits (75), Expect(2) = 3e-10
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 527 ARWYAIKEKFCKDKSRDQNIALGDRNTRYFHNKA 628
A+W ++E + SR+ + GDRNTR+FH A
Sbjct: 166 AKWVELEETHWRQVSRELWLKEGDRNTRFFHRMA 199