BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00006743
         (3457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein...  1549   0.0  
ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein...  1479   0.0  
ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein...  1476   0.0  
ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein...  1466   0.0  
ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]...  1451   0.0  

>ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
            vinifera] gi|297738576|emb|CBI27821.3| unnamed protein
            product [Vitis vinifera]
          Length = 1091

 Score = 1549 bits (4011), Expect = 0.0
 Identities = 789/1031 (76%), Positives = 884/1031 (85%), Gaps = 10/1031 (0%)
 Frame = -2

Query: 3342 MACVYIPVQNSEEEVRVTLDSLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKTEQFR 3163
            MA VYIPVQNSEEEVRV LD LPRDASDILDILKAEQAPLDLWLIIAREYFKQGK +QFR
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 60

Query: 3162 EILDEGCSPEIDEYYADMKLERIAILNALGAYYSYQGKIETKQREKDEYFVLATQYYNRA 2983
            +IL+EG SPEIDEYYAD++ ERIAILNALGAYYSY GKIETKQREK+E+F+LATQYYN+A
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 2982 SRIDIHEPSTWVGKGQLLLAKGDTEQASSTFKIVLEGNPKNVPALLGQACVQFSLNRYTE 2803
            SRID+HE STWVGKGQLLLAKGD EQA + FKIVL+G+  NVPALLGQACV+F+  RY++
Sbjct: 121  SRIDMHEASTWVGKGQLLLAKGDVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 180

Query: 2802 SLDLYKRALQVYPNGPAALRLGIGLCRYKLGQFEKARQAFQRVLQLDPENVEALVALGIM 2623
            SLDLYKRALQVYP+ PAA+R+GIGLC YKLGQFEKAR+AFQRVLQLDPENVEALVALGIM
Sbjct: 181  SLDLYKRALQVYPDCPAAVRVGIGLCCYKLGQFEKARKAFQRVLQLDPENVEALVALGIM 240

Query: 2622 DLQANDGSGIRRGMEKMQRAFEIYPYCAMALNHLANHFFFTGQHFLVEQLTETALAVSDH 2443
            DL  ND SGIR+GMEKMQRAFEIYPYCAMALN+LANHFFFTGQHFLVEQLTETALAV++H
Sbjct: 241  DLHTNDASGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 2442 GLMKSHSYYNLARSYHSKGDFEKAGFYYMASVKESSRPQDFVLPYYGLGQVQLKLGDFRS 2263
            G  KSHSYYNLARSYHSKGD+EKAG YYMASVKES++P DFVLPYYGLGQVQLKLGDFRS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKESNKPHDFVLPYYGLGQVQLKLGDFRS 360

Query: 2262 SLANFEKVLEAYPDSVESMKAVGHIYVQLGQTDKALEILRKATKADPRDAQAFLELGELL 2083
            SL+NFEKVLE YP++ E++KA+GHIYVQLGQT+KA E LRKATK DPRDAQAFL+LGELL
Sbjct: 361  SLSNFEKVLEVYPENCEALKALGHIYVQLGQTEKAQEYLRKATKIDPRDAQAFLDLGELL 420

Query: 2082 IANDPGAALDSFKTARGLLKKGGEEVPIELFNNIGVLHFEKGEFELAQQTFKEALGDGVW 1903
            I +D GAALD+FKTARGLLKKGGEEVPIEL NNIGVL+FE+GEFELA+QTFKEA+GDG+W
Sbjct: 421  ITSDTGAALDAFKTARGLLKKGGEEVPIELLNNIGVLYFERGEFELAEQTFKEAVGDGIW 480

Query: 1902 RDFLDGKLHS----SVAITHQYNDMHIFQKLQENGVSVELPWNKVTTLFNQARLLEQLHE 1735
              F+D K +S    +    H + DM +F +L+E+G  VELPWNKVT LFN ARLLEQL+ 
Sbjct: 481  LSFIDDKAYSYANDARTSMHHFKDMQLFHQLEEDGHFVELPWNKVTVLFNLARLLEQLNN 540

Query: 1734 TEKAAILYRLTLYKYPEYADASLRLAAIAKARNNIPLSIALIGDALKVNEKCPNALSMLG 1555
            T+ A+ILYRL L+K+P+Y DA LRLAAIAKARNNI LSI L+GDALKVN+K PN+L MLG
Sbjct: 541  TKTASILYRLILFKFPDYIDAYLRLAAIAKARNNIQLSIELVGDALKVNDKGPNSLCMLG 600

Query: 1554 SLELKSDDWVKAKDTFRAAKEATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKA 1375
             LELK+DDWVKAK+TFR+A +ATDGKDSYATLSLGNWNYFAA+RSEKR PKLEATHLEKA
Sbjct: 601  DLELKNDDWVKAKETFRSASDATDGKDSYATLSLGNWNYFAAIRSEKRAPKLEATHLEKA 660

Query: 1374 KELYTKVLVQRPANLYAANGTGVVLAEKGQFDVSKDIFTQVQEAASGSIFVQMPDVWINL 1195
            KELYT+VLVQ  ANLYAANG GVVLAEKG FDVSKDIFTQVQEAASGS+FVQMPDVWINL
Sbjct: 661  KELYTRVLVQHNANLYAANGAGVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 720

Query: 1194 AHVYFAQGQFAQAVKMYQNCLRKFYYNTDTQILLYLARTHYEAEHWQDCKKTLLRAIHLA 1015
            AHVYFAQG FA AVKMYQNCLRKFYYNTD+Q+LLYLARTHYEAE WQDCKKTLLRAIHLA
Sbjct: 721  AHVYFAQGNFALAVKMYQNCLRKFYYNTDSQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 780

Query: 1014 PSNYTLRFDAGVSMQKFSASTLQKTKRTADEVRATVAELKNAVRVFSQLSAASSLQFHGF 835
            PSNYTLRFDAGV+MQKFSASTLQKTKRTADEVR+TVAELKNAVR+FSQLSAAS+L FHGF
Sbjct: 781  PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVRIFSQLSAASNLHFHGF 840

Query: 834  DEKKIETHVGYCKHLLEAAKVHCXXXXXXXXXXXXXXEVARQVSLAEEARRKVEEQRKLQ 655
            DEKKIETHVGYCKHLLEAAKVHC              E+ARQV+LAEEARRK EEQRK Q
Sbjct: 841  DEKKIETHVGYCKHLLEAAKVHCEAAEREELQNRHRVELARQVNLAEEARRKAEEQRKFQ 900

Query: 654  LEKRKQEDELXXXXXXXXXXXXXXXQWRS-SAPSKRKERSHAEDEQXXXXXXXXXXXXXX 478
            LE+RKQEDEL               QW+S +  SKRKERS  +D++              
Sbjct: 901  LERRKQEDELKRVMQQEQHFERVKEQWKSNNLNSKRKERSQIDDDEGGQSERRRRKGGKR 960

Query: 477  XXXXKSHYEMDDTEADMGGEHEEY----ANVNTRDTMNRMMDDEDDNGEDFAQD-LAAAG 313
                KS Y+ ++  AD   + +E      N+N R++ N+ M+++DD+GED AQD LAAAG
Sbjct: 961  RKKDKSRYDSEEARADAMDDQDEMEDEDTNMNHRESTNQ-MNNQDDDGEDDAQDLLAAAG 1019

Query: 312  LEDSDVEDEAA 280
            LEDSD ED+ A
Sbjct: 1020 LEDSDAEDDMA 1030


>ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max]
          Length = 1088

 Score = 1479 bits (3830), Expect = 0.0
 Identities = 764/1074 (71%), Positives = 872/1074 (81%), Gaps = 15/1074 (1%)
 Frame = -2

Query: 3342 MACVYIPVQNSEEEVRVTLDSLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKTEQFR 3163
            MA VYIPVQNSEEEVRV LD LPRDASDILDILKAEQAPLDLWLIIAREYFKQGK +Q+R
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQYR 60

Query: 3162 EILDEGCSPEIDEYYADMKLERIAILNALGAYYSYQGKIETKQREKDEYFVLATQYYNRA 2983
            +IL+EG SPEIDEYYAD++ ERIAILNALGAYYSY GKIETKQREK+E+F+LATQYYN+A
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 2982 SRIDIHEPSTWVGKGQLLLAKGDTEQASSTFKIVLEGNPKNVPALLGQACVQFSLNRYTE 2803
            SRID+HEPSTWVGKGQLLLAKG+ EQAS+ FKIVL+G+  NVPALLGQACV+F+  R+++
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDHDNVPALLGQACVEFNRGRFSD 180

Query: 2802 SLDLYKRALQVYPNGPAALRLGIGLCRYKLGQFEKARQAFQRVLQLDPENVEALVALGIM 2623
            SL+LYKR LQVYPN PAA+RLGIGLCRYKLGQFEKA+QAF+RVLQLDPENVE+L+AL IM
Sbjct: 181  SLELYKRVLQVYPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVESLIALAIM 240

Query: 2622 DLQANDGSGIRRGMEKMQRAFEIYPYCAMALNHLANHFFFTGQHFLVEQLTETALAVSDH 2443
            DL+ N+ +GIR GM KMQRAFEIYPYCAMALN+LANHFFFTGQHFLVEQLTETALAV++H
Sbjct: 241  DLRTNEATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 2442 GLMKSHSYYNLARSYHSKGDFEKAGFYYMASVKESSRPQDFVLPYYGLGQVQLKLGDFRS 2263
            G  KSHSYYNLARSYHSKGD++KAG YYMASVKE ++P +FV PYYGLGQVQ+KLGDF+S
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKS 360

Query: 2262 SLANFEKVLEAYPDSVESMKAVGHIYVQLGQTDKALEILRKATKADPRDAQAFLELGELL 2083
            +L+NFEKVLE YPD+ E++KA+GHIYVQLGQTDK  + +RKATK DPRDAQAFLELGELL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 420

Query: 2082 IANDPGAALDSFKTARGLLKKGGEEVPIELFNNIGVLHFEKGEFELAQQTFKEALGDGVW 1903
            I +D GAALD+FKTA  L KKGG+EVPIEL NNIGVL FE+GEFELA+QTFKEALGDGVW
Sbjct: 421  ILSDTGAALDAFKTAHTLFKKGGQEVPIELLNNIGVLQFERGEFELARQTFKEALGDGVW 480

Query: 1902 RDFLDGKLHSSV---AITHQYNDMHIFQKLQENGVSVELPWNKVTTLFNQARLLEQLHET 1732
              F++ +  SS+     T Q+ DM +F  L+ NG  VE+PW+KVT LFN ARLLEQL+++
Sbjct: 481  LSFINEENKSSIDAATSTLQFKDMQLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLYDS 540

Query: 1731 EKAAILYRLTLYKYPEYADASLRLAAIAKARNNIPLSIALIGDALKVNEKCPNALSMLGS 1552
              A+I YRL L+KYP+Y DA LRLAAIAKARNNI LSI L+ DALKVN KCPNALSMLG 
Sbjct: 541  GTASIFYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNNKCPNALSMLGE 600

Query: 1551 LELKSDDWVKAKDTFRAAKEATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKAK 1372
            LELK+DDWVKAK+T R A +ATDGKDSYATLSLGNWNYFAAVR+EKR PKLEATHLEKAK
Sbjct: 601  LELKNDDWVKAKETLRTASDATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKAK 660

Query: 1371 ELYTKVLVQRPANLYAANGTGVVLAEKGQFDVSKDIFTQVQEAASGSIFVQMPDVWINLA 1192
            EL T+VL+Q  +NLYAANG  VVLAEKG FDVSKDIFTQVQEAASGS+FVQMPDVWINLA
Sbjct: 661  ELCTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLA 720

Query: 1191 HVYFAQGQFAQAVKMYQNCLRKFYYNTDTQILLYLARTHYEAEHWQDCKKTLLRAIHLAP 1012
            HVYFAQG F  AVKMYQNCLRKFY+NTD+QILLYLARTHYEAE WQDC KTLLRAIHLAP
Sbjct: 721  HVYFAQGNFTLAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLAP 780

Query: 1011 SNYTLRFDAGVSMQKFSASTLQKTKRTADEVRATVAELKNAVRVFSQLSAASSLQFHGFD 832
            SNYTLRFDAGV+MQKFSASTLQK KRTADEVRATVAEL+NAVRVFSQLSAAS+L  HGFD
Sbjct: 781  SNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGFD 840

Query: 831  EKKIETHVGYCKHLLEAAKVHCXXXXXXXXXXXXXXEVARQVSLAEEARRKVEEQRKLQL 652
            EKKI+THVGYC HLL AAKVH               E+ARQV+LAEEARRK EEQRK Q+
Sbjct: 841  EKKIDTHVGYCNHLLSAAKVHLEAAEHEEQQVRQRQELARQVALAEEARRKAEEQRKFQM 900

Query: 651  EKRKQEDELXXXXXXXXXXXXXXXQWRSSAPSKRKERSHAED----EQXXXXXXXXXXXX 484
            E+RKQEDEL               QW+SS+ SKR+ERS  E+    E+            
Sbjct: 901  ERRKQEDELKRVQKQEEHFRRVKEQWKSSSHSKRRERSDDEEGGTGEKKRKKGGKRRKKD 960

Query: 483  XXXXXXKSHYEMDDTEADMGGEHEEYANVNTR-DTMNRMMDDEDDNGEDFAQDLAAAGLE 307
                      E +D   D  G  +E A++N R +   +M DD ++N +     LAAAGLE
Sbjct: 961  KHSKLRYDAEEPEDDLMDEQGMEDEEADINYREEPQTQMNDDAEENAQGL---LAAAGLE 1017

Query: 306  DSDVEDEAAA--SNVNKK----XXXXXXXXXXXXXXXXXXENSAD-PLSDGEVR 166
            DSD ++E AA  S++ ++                      +NSAD  LSDGE+R
Sbjct: 1018 DSDADEETAAPSSSIARRRQALSESDDDEPLLQRQSSPVRQNSADMQLSDGEIR 1071


>ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max]
          Length = 1086

 Score = 1476 bits (3822), Expect = 0.0
 Identities = 768/1077 (71%), Positives = 876/1077 (81%), Gaps = 18/1077 (1%)
 Frame = -2

Query: 3342 MACVYIPVQNSEEEVRVTLDSLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKTEQFR 3163
            MA VYIPVQNSEEEVRV LD LPRDASDILDILKAEQAPLDLWL+IAREYFKQGK +QFR
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIDQFR 60

Query: 3162 EILDEGCSPEIDEYYADMKLERIAILNALGAYYSYQGKIETKQREKDEYFVLATQYYNRA 2983
            +IL+EG SPEID+YYAD++ ERIAILNALGAYYSY GKIETKQREK+E+F+LATQYYN+A
Sbjct: 61   QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 2982 SRIDIHEPSTWVGKGQLLLAKGDTEQASSTFKIVLEGNPKNVPALLGQACVQFSLNRYTE 2803
            SRID+HEPSTWVGKGQLLLAKG+ EQAS+ FKIVL+G+  NVPALLGQACV+F+  RY++
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 180

Query: 2802 SLDLYKRALQVYPNGPAALRLGIGLCRYKLGQFEKARQAFQRVLQLDPENVEALVALGIM 2623
            SL+LYKRAL VYP+ PAA+RLGIGLCRYKLGQFEKA+QAF+R   LDPENVEALVAL IM
Sbjct: 181  SLELYKRALLVYPDCPAAVRLGIGLCRYKLGQFEKAQQAFER---LDPENVEALVALAIM 237

Query: 2622 DLQANDGSGIRRGMEKMQRAFEIYPYCAMALNHLANHFFFTGQHFLVEQLTETALAVSDH 2443
            DL+ N+ +GIR GM KMQRAFEIYPYCAMALN+LANHFFFTGQHFLVEQLTETALAV++H
Sbjct: 238  DLRTNEATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 297

Query: 2442 GLMKSHSYYNLARSYHSKGDFEKAGFYYMASVKESSRPQDFVLPYYGLGQVQLKLGDFRS 2263
            G  KSHSYYNLARSYHSKGD++KAG YYMASVKE ++P +FV PYYGLGQVQ+KLGDF+S
Sbjct: 298  GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKS 357

Query: 2262 SLANFEKVLEAYPDSVESMKAVGHIYVQLGQTDKALEILRKATKADPRDAQAFLELGELL 2083
            +L+NFEKVLE YPD+ E++KA+GHIYVQLGQTDK  + +RKATK DPRDAQAFLELGELL
Sbjct: 358  ALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 417

Query: 2082 IANDPGAALDSFKTARGLLKKGGEEVPIELFNNIGVLHFEKGEFELAQQTFKEALGDGVW 1903
            I +D GAALD+FKTAR L KKGG+EVPIEL NNIGVL FE+GEFELAQQTFKEALGDGVW
Sbjct: 418  ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQTFKEALGDGVW 477

Query: 1902 RDFLDGKLHSSV---AITHQYNDMHIFQKLQENGVSVELPWNKVTTLFNQARLLEQLHET 1732
              F++ +  SS+     T Q+ DM +F  L+ NG  VE+PW+KVT LFN ARLLEQL+++
Sbjct: 478  LSFINEEKKSSIDAATSTLQFKDMKLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLNDS 537

Query: 1731 EKAAILYRLTLYKYPEYADASLRLAAIAKARNNIPLSIALIGDALKVNEKCPNALSMLGS 1552
              A+ILYRL L+KYP+Y DA LRLAAIAKARNNI LSI L+ DALKVN KCPNALSMLG 
Sbjct: 538  GTASILYRLVLFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNNKCPNALSMLGE 597

Query: 1551 LELKSDDWVKAKDTFRAAKEATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKAK 1372
            LELK+DDWVKAK+T RAA +AT+GKDSYA+LSLGNWNYFAAVR+EKR PKLEATHLEKAK
Sbjct: 598  LELKNDDWVKAKETLRAASDATEGKDSYASLSLGNWNYFAAVRNEKRNPKLEATHLEKAK 657

Query: 1371 ELYTKVLVQRPANLYAANGTGVVLAEKGQFDVSKDIFTQVQEAASGSIFVQMPDVWINLA 1192
            ELYT+VL+Q  +NLYAANG  VVLAEKG FDVSKDIFTQVQEAASGS+FVQMPDVWINLA
Sbjct: 658  ELYTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLA 717

Query: 1191 HVYFAQGQFAQAVKMYQNCLRKFYYNTDTQILLYLARTHYEAEHWQDCKKTLLRAIHLAP 1012
            HVYFAQG F  AVKMYQNCLRKFY+NTD+QILLYLARTHYEAE WQDC KTLLRAIHLAP
Sbjct: 718  HVYFAQGNFTLAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLAP 777

Query: 1011 SNYTLRFDAGVSMQKFSASTLQKTKRTADEVRATVAELKNAVRVFSQLSAASSLQFHGFD 832
            SNYTLRFDAGV+MQKFSASTLQK KRTADEVRATVAEL+NAVRVFSQLSAAS+L  HGFD
Sbjct: 778  SNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGFD 837

Query: 831  EKKIETHVGYCKHLLEAAKVHCXXXXXXXXXXXXXXEVARQVSLAEEARRKVEEQRKLQL 652
            EKKI+THVGYC HLL AAKVH               E+ARQV+ AEEARRK EEQRK Q+
Sbjct: 838  EKKIDTHVGYCNHLLSAAKVHLEAAEREEQQVRQRQELARQVAFAEEARRKAEEQRKFQM 897

Query: 651  EKRKQEDELXXXXXXXXXXXXXXXQWRSSAPSKRKERSHAEDEQXXXXXXXXXXXXXXXX 472
            E+RKQEDEL               QW+SS+ SKR+ERS  +DE+                
Sbjct: 898  ERRKQEDELKRVQQQEEHFRRVKEQWKSSSHSKRRERS--DDEEGGGTGEKKRKKGGKRR 955

Query: 471  XXKSH----YEMDDTEADMGGEHE---EYANVNTR-DTMNRMMDDEDDNGEDFAQDLAAA 316
                H    Y+ ++ E DM  E E   E A++N R +   +M DD ++N +     LAAA
Sbjct: 956  KKDKHSKSRYDTEEPENDMMDEQEMEDEEADINYREEPQTQMNDDAEENAQGL---LAAA 1012

Query: 315  GLEDSDVEDEAAA--SNVNKK----XXXXXXXXXXXXXXXXXXENSAD-PLSDGEVR 166
            GLEDSD ++EA A  S++ ++                      ENSAD  LSDGE+R
Sbjct: 1013 GLEDSDADEEAPAPSSSIARRRQALSESDDDEPLIQRQSSPARENSADMQLSDGEIR 1069


>ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Cucumis
            sativus]
          Length = 1074

 Score = 1466 bits (3796), Expect = 0.0
 Identities = 743/1036 (71%), Positives = 857/1036 (82%), Gaps = 10/1036 (0%)
 Frame = -2

Query: 3342 MACVYIPVQNSEEEVRVTLDSLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKTEQFR 3163
            MACVYIPVQNSEEEVRV LD LPRDASDILDILKAEQAPLDLWLIIAREYFKQGK EQFR
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 60

Query: 3162 EILDEGCSPEIDEYYADMKLERIAILNALGAYYSYQGKIETKQREKDEYFVLATQYYNRA 2983
            +IL+EG SPEIDEYYAD++ ERIAILNALGAYYSY GKIETKQREK+E+F+LATQYYN+A
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 2982 SRIDIHEPSTWVGKGQLLLAKGDTEQASSTFKIVLEGNPKNVPALLGQACVQFSLNRYTE 2803
            SRID+HEPSTWVGKGQLLL KG+ EQA + FKIVL+G+  NVPALLGQACV+F+   Y+E
Sbjct: 121  SRIDMHEPSTWVGKGQLLLTKGEVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGHYSE 180

Query: 2802 SLDLYKRALQVYPNGPAALRLGIGLCRYKLGQFEKARQAFQRVLQLDPENVEALVALGIM 2623
            SL+LYKRALQVYP+ PAA+RLGIGLCRY+L Q+ KA+QAF+R   LDPENVEALV L I+
Sbjct: 181  SLELYKRALQVYPDCPAAVRLGIGLCRYQLKQYGKAQQAFER---LDPENVEALVGLAII 237

Query: 2622 DLQANDGSGIRRGMEKMQRAFEIYPYCAMALNHLANHFFFTGQHFLVEQLTETALAVSDH 2443
            DL  N+   IR GMEKMQRAFEIYP+CAMALN+LANHFFFTGQHFLVEQLTETALA+++H
Sbjct: 238  DLNTNEAGRIRNGMEKMQRAFEIYPFCAMALNYLANHFFFTGQHFLVEQLTETALAITNH 297

Query: 2442 GLMKSHSYYNLARSYHSKGDFEKAGFYYMASVKESSRPQDFVLPYYGLGQVQLKLGDFRS 2263
            G  KSHS+YNLARSYHSKGD+EKAG YYMAS KE+++P++FV PYYGLGQVQLK+GD RS
Sbjct: 298  GPTKSHSFYNLARSYHSKGDYEKAGLYYMASAKEANKPREFVFPYYGLGQVQLKMGDLRS 357

Query: 2262 SLANFEKVLEAYPDSVESMKAVGHIYVQLGQTDKALEILRKATKADPRDAQAFLELGELL 2083
            +L+NFEKVLE YPD+ E++K +GHIYVQLGQ +KA E LRKATK DPRDAQAFL+LGELL
Sbjct: 358  ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQAEKAQESLRKATKIDPRDAQAFLDLGELL 417

Query: 2082 IANDPGAALDSFKTARGLLKKGGEEVPIELFNNIGVLHFEKGEFELAQQTFKEALGDGVW 1903
            I+ D  AALD+FKTA  LLKKGG+EVPIE+ NN+GVLHFE+ EFELA++ FKEALGDG+W
Sbjct: 418  ISTDESAALDAFKTASILLKKGGQEVPIEVLNNLGVLHFEREEFELAERIFKEALGDGIW 477

Query: 1902 RDFLDGKLH----SSVAITHQYNDMHIFQKLQENGVSVELPWNKVTTLFNQARLLEQLHE 1735
             DF+DGK+      + A   QY D+ +F +L+  G ++ LPW KVT+LFN ARLLEQLH 
Sbjct: 478  LDFIDGKVRCPAIEASASVLQYKDVELFYQLEREGRAIVLPWKKVTSLFNLARLLEQLHR 537

Query: 1734 TEKAAILYRLTLYKYPEYADASLRLAAIAKARNNIPLSIALIGDALKVNEKCPNALSMLG 1555
             E +++LYRL L+KYP+Y DA LRLA+IAKARN + LSI L+ DALKVN+KC NALSMLG
Sbjct: 538  IEVSSVLYRLILFKYPDYVDAYLRLASIAKARNYVQLSIELVNDALKVNDKCSNALSMLG 597

Query: 1554 SLELKSDDWVKAKDTFRAAKEATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKA 1375
             LELK+DDWV+AK+TFRAA EATDGKDSYATLSLGNWNYFAA+R+EKR PKLEATHLEK+
Sbjct: 598  ELELKNDDWVRAKETFRAAGEATDGKDSYATLSLGNWNYFAALRNEKRNPKLEATHLEKS 657

Query: 1374 KELYTKVLVQRPANLYAANGTGVVLAEKGQFDVSKDIFTQVQEAASGSIFVQMPDVWINL 1195
            KELYT+VLVQ PANLYAANG GV+LAEKGQFDVSKDIFTQVQEAASG+IFVQMPDVWINL
Sbjct: 658  KELYTRVLVQHPANLYAANGAGVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINL 717

Query: 1194 AHVYFAQGQFAQAVKMYQNCLRKFYYNTDTQILLYLARTHYEAEHWQDCKKTLLRAIHLA 1015
            AHVYFAQG F+ AVKMYQNCLRKFYYNTD QILLYLART+YEAE WQDCKKTLLRAIHLA
Sbjct: 718  AHVYFAQGNFSLAVKMYQNCLRKFYYNTDYQILLYLARTYYEAEQWQDCKKTLLRAIHLA 777

Query: 1014 PSNYTLRFDAGVSMQKFSASTLQKTKRTADEVRATVAELKNAVRVFSQLSAASSLQFHGF 835
            PSNYTLRFDAGV+MQKFSASTLQKTKRTADEVR+TVAEL+NAVRVFSQLSAAS+L FHGF
Sbjct: 778  PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGF 837

Query: 834  DEKKIETHVGYCKHLLEAAKVHCXXXXXXXXXXXXXXEVARQVSLAEEARRKVEEQRKLQ 655
            DEKKI+THVGYCKHLLEAA VH               E+ARQV+LAE+ARRK +EQRK Q
Sbjct: 838  DEKKIDTHVGYCKHLLEAAGVHLKAAEHEEQQIRQRQELARQVALAEDARRKADEQRKFQ 897

Query: 654  LEKRKQEDELXXXXXXXXXXXXXXXQWRSSAPSKRKERSHAEDEQ---XXXXXXXXXXXX 484
            LE+RK EDE                QW+S  P+KR+ERS  +D++               
Sbjct: 898  LERRKLEDEEKRMMQQEQHFKRVKEQWKSITPAKRRERSEIDDDEAGNSEKRRRKGGKRR 957

Query: 483  XXXXXXKSHYEMDDTEADMGGEHEEY---ANVNTRDTMNRMMDDEDDNGEDFAQDLAAAG 313
                  KSHYE ++ + DM  + E Y    N++ R++ +++ D  DD   +    LA AG
Sbjct: 958  KKDRKGKSHYETEEADNDMMDDQELYNEDNNISYRESRSQVNDQGDDFEGNDQDALAEAG 1017

Query: 312  LEDSDVEDEAAASNVN 265
            LEDSD EDEA A + N
Sbjct: 1018 LEDSDAEDEAGAPSSN 1033


>ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]
            gi|222833309|gb|EEE71786.1| PAF1 complex component
            [Populus trichocarpa]
          Length = 1056

 Score = 1451 bits (3755), Expect = 0.0
 Identities = 750/1035 (72%), Positives = 853/1035 (82%), Gaps = 13/1035 (1%)
 Frame = -2

Query: 3342 MACVYIPVQNSEEEVRVTLDSLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKTEQFR 3163
            MA VYIPVQNSEEEVRV LD LPRDASDILDILKAEQAPLDLWLIIAREYFKQGK +QFR
Sbjct: 1    MAFVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLDQFR 60

Query: 3162 EILDEGCSPEIDEYYADMKLERIAILNALGAYYSYQGKIETKQREKDEYFVLATQYYNRA 2983
            +IL+EG S EIDEYYAD++ ERIAILNALGAYYSY GK+ETKQREK+EYF+ AT++YN+A
Sbjct: 61   QILEEGSSHEIDEYYADVRYERIAILNALGAYYSYLGKVETKQREKEEYFIQATKHYNKA 120

Query: 2982 SRIDIHEPSTWVGKGQLLLAKGDTEQASSTFKIVLEGNPKNVPALLGQACVQFSLNRYTE 2803
            SRID+HEPSTWVGKGQLLLAKG+ EQAS+ F+IVLEG+  NV ALLGQACV++S   Y E
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFRIVLEGDRDNVSALLGQACVEYSRGHYGE 180

Query: 2802 SLDLYKRALQVYPNGPAALRLGIGLCRYKLGQFEKARQAFQRVLQLDPENVEALVALGIM 2623
            SL L+KRALQVYP+ P A+RLGIG C YKLG   KA  AFQR   LDPENVEALV+L I+
Sbjct: 181  SLTLFKRALQVYPDCPGAVRLGIGHCHYKLGHVGKACLAFQR---LDPENVEALVSLAIL 237

Query: 2622 DLQANDGSGIRRGMEKMQRAFEIYPYCAMALNHLANHFFFTGQHFLVEQLTETALAVSDH 2443
            DLQ N+ + IR+GMEKMQRAFEIYPYCAMALN+LANHFFFTGQHFLVEQLTETALAV++H
Sbjct: 238  DLQTNEAAAIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 297

Query: 2442 GLMKSHSYYNLARSYHSKGDFEKAGFYYMASVKESSRPQDFVLPYYGLGQVQLKLGDFRS 2263
            G  KSHSYYNLARSYHSKGD+E A  YY ASVKE ++P +FV PYYGLGQVQLKLG+ ++
Sbjct: 298  GPTKSHSYYNLARSYHSKGDYETASRYYWASVKEINKPSEFVFPYYGLGQVQLKLGEIKN 357

Query: 2262 SLANFEKVLEAYPDSVESMKAVGHIYVQLGQTDKALEILRKATKADPRDAQAFLELGELL 2083
            +L+NFEKVLE YPD+ E++K +GHIYVQLGQT+KA E LRKA K DPRDAQAFL+LGELL
Sbjct: 358  ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQTEKAQEFLRKAAKIDPRDAQAFLDLGELL 417

Query: 2082 IANDPGAALDSFKTARGLLKKGGEEVPIELFNNIGVLHFEKGEFELAQQTFKEALGDGVW 1903
            I+ D GAALD+FKTAR LLKKGGEEVPIE+ NNI V+HFE+ E ELA Q FKEALGDG+W
Sbjct: 418  ISTDTGAALDAFKTARSLLKKGGEEVPIEVLNNIAVIHFEREELELALQNFKEALGDGIW 477

Query: 1902 RDFLDGKLHS----SVAITHQYNDMHIFQKLQENGVSVELPWNKVTTLFNQARLLEQLHE 1735
              FL+GK ++    + +   QY DM IF++L+E G SVEL WNKVTTLFN ARLLEQLH 
Sbjct: 478  LTFLEGKANTYEVDATSSLLQYKDMQIFRRLEEEGHSVELSWNKVTTLFNLARLLEQLHN 537

Query: 1734 TEKAAILYRLTLYKYPEYADASLRLAAIAKARNNIPLSIALIGDALKVNEKCPNALSMLG 1555
            TE A+ LYRL L+KYP+Y DA LRLAAIAKARNN+PLSI L+ +AL VN+KCPNALSMLG
Sbjct: 538  TETASTLYRLILFKYPDYVDAYLRLAAIAKARNNLPLSIELVNEALTVNDKCPNALSMLG 597

Query: 1554 SLELKSDDWVKAKDTFRAAKEATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKA 1375
             LELK+DDWVKAK+TFRAA EATDGKDSYATLSLGNWNYFAA+R+EKR PKLEATHLEKA
Sbjct: 598  DLELKNDDWVKAKETFRAASEATDGKDSYATLSLGNWNYFAAIRNEKRNPKLEATHLEKA 657

Query: 1374 KELYTKVLVQRPANLYAANGTGVVLAEKGQFDVSKDIFTQVQEAASGSIFVQMPDVWINL 1195
            KELYT+VLVQ  ANLYAANG GVVLAEKG FDVSKD+FTQVQEAASGSIFVQMPDVWINL
Sbjct: 658  KELYTRVLVQHTANLYAANGAGVVLAEKGHFDVSKDLFTQVQEAASGSIFVQMPDVWINL 717

Query: 1194 AHVYFAQGQFAQAVKMYQNCLRKFYYNTDTQILLYLARTHYEAEHWQDCKKTLLRAIHLA 1015
            AHVYFAQG FA AVKMYQNCL+KF+YNTD+QILLYLARTHYEAE WQDCK+TLLRAIHL 
Sbjct: 718  AHVYFAQGNFALAVKMYQNCLQKFFYNTDSQILLYLARTHYEAEQWQDCKRTLLRAIHLT 777

Query: 1014 PSNYTLRFDAGVSMQKFSASTLQKTKRTADEVRATVAELKNAVRVFSQLSAASSLQFHGF 835
            PSNYTLRFDAGV+MQKFSASTLQKTKRT DEVR+TV EL+NAVR+FSQLSAAS+L F+GF
Sbjct: 778  PSNYTLRFDAGVAMQKFSASTLQKTKRTVDEVRSTVDELENAVRLFSQLSAASNLYFNGF 837

Query: 834  DEKKIETHVGYCKHLLEAAKVHCXXXXXXXXXXXXXXEVARQVSLAEEARRKVEEQRKLQ 655
            DEKKI THV YCKHLLEAA VH               ++ARQ++LAEEARRK EEQRK Q
Sbjct: 838  DEKKINTHVEYCKHLLEAAIVHREAAEREEQQNRQRLDLARQMALAEEARRKAEEQRKFQ 897

Query: 654  LEKRKQEDELXXXXXXXXXXXXXXXQWRSS-APSKRKERSHAEDEQ---XXXXXXXXXXX 487
            LE+RKQEDEL               QW+SS + SKR++R+  +D +              
Sbjct: 898  LERRKQEDELKRVRQQEEHFERVKEQWKSSTSASKRRDRADIDDGEGGHGEKRRRKGGKR 957

Query: 486  XXXXXXXKSHYEMDDTEADMGGEHEE----YANVNTRDTMNRMMDDEDDNGEDFAQD-LA 322
                   +S YEM+  EADM  +H+E     ANVN R+     M+D+DDN E+ AQD LA
Sbjct: 958  RKKEKSSRSRYEME--EADMMDDHDEPEDDDANVNFREP-GYQMNDQDDNAEENAQDVLA 1014

Query: 321  AAGLEDSDVEDEAAA 277
            AAGLEDSD +D+AAA
Sbjct: 1015 AAGLEDSDADDDAAA 1029