BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00006703
         (1086 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311536.1| rna-dependent RNA polymerase [Populus tricho...   494   e-137
ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   478   e-132
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]       477   e-132
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   477   e-132
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      476   e-132

>ref|XP_002311536.1| rna-dependent RNA polymerase [Populus trichocarpa]
            gi|222851356|gb|EEE88903.1| rna-dependent RNA polymerase
            [Populus trichocarpa]
          Length = 1133

 Score =  494 bits (1273), Expect = e-137
 Identities = 255/362 (70%), Positives = 294/362 (81%), Gaps = 1/362 (0%)
 Frame = -3

Query: 1084 QYLEYSLSANPPRSTSISLSDGLVYVRRVQVTPLKVYFLGPEINVSNRVLRYYREHIDNF 905
            QY +Y  S NPPRS  +SL  GLVYV +VQ+TP KV+F GPE+NVSNRVLR YRE IDNF
Sbjct: 342  QYKKYLTSGNPPRSPVLSLDAGLVYVYKVQITPCKVFFCGPEVNVSNRVLRQYREDIDNF 401

Query: 904  IRISFVDEDSEKIRSTDLSARATMNDEKKQTLLYERILSTLHNGVVIGDKKFEFLAFSTS 725
            +R+SFVDE+ EKI STD+S R +  +E ++T +Y RILSTL NG+VIGDKKFEFLAFS+S
Sbjct: 402  LRVSFVDEELEKIHSTDVSPRTSSRNELRRTAIYNRILSTLQNGIVIGDKKFEFLAFSSS 461

Query: 724  QLRDNSAWMFASKGSLTAASIRDWMGDFRKIRNVAKYAARLGQSFGSSTETLSVSRXXXX 545
            QLR+NS WMFAS+  LTAA IR WMG F KIRNVA+YAARLGQSFGSSTETLSVS     
Sbjct: 462  QLRENSCWMFASRLGLTAADIRAWMGSFHKIRNVARYAARLGQSFGSSTETLSVSSHEIE 521

Query: 544  XXXXXXXESNGTVYTFSDGIGKISSEFAHKVASKCGLK-CTPSAFQIRYGGYKGVVAVDP 368
                      GT Y FSDGIGKIS+EFA KVA KCG K  TPSAFQIRY GYKGVVAVDP
Sbjct: 522  IIPDIEVSRGGTRYLFSDGIGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGVVAVDP 581

Query: 367  RSVKKLYLRPSMRKFKSKVTKLDVLSWSKFQPCFLNRQIISLLSTLGVSDYVFKKKQKEA 188
             S KKL LR SM K++S+ TKLDVL+ SK+QPCFLNRQ+I+LLSTLGV D+ F++KQ+EA
Sbjct: 582  TSSKKLSLRRSMFKYESENTKLDVLAHSKYQPCFLNRQLITLLSTLGVPDHHFERKQREA 641

Query: 187  VKQLDSILTDPLKAYKALEIMSPAETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLSE 8
            V QLD++LTDPL+A +ALE+MSP E TNILKEMLLCGY+PD EPFLSMMLQTFRA+KL E
Sbjct: 642  VDQLDAMLTDPLRAQEALELMSPGENTNILKEMLLCGYQPDAEPFLSMMLQTFRASKLLE 701

Query: 7    LR 2
            LR
Sbjct: 702  LR 703


>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Glycine max]
          Length = 1125

 Score =  478 bits (1229), Expect = e-132
 Identities = 249/363 (68%), Positives = 292/363 (80%), Gaps = 2/363 (0%)
 Frame = -3

Query: 1084 QYLEYSLSANPPRSTSISLSDGLVYVRRVQVTPLKVYFLGPEINVSNRVLRYYREHIDNF 905
            QY  Y  S N PRS +ISL  GLVYVRRVQ+TP KVYF GPE+NVSNRVLR++REHIDNF
Sbjct: 345  QYKTYLESKNHPRSPAISLDTGLVYVRRVQITPCKVYFCGPEMNVSNRVLRHFREHIDNF 404

Query: 904  IRISFVDEDSEKIRSTDLSARATMNDEKKQTLLYERILSTLHNGVVIGDKKFEFLAFSTS 725
            +R+SFVDE+ +K+ STDLS+R+    + K+T +Y RILS L NG+V+GDKKFEFLAFS+S
Sbjct: 405  LRVSFVDEELDKLFSTDLSSRS----QNKKTEIYTRILSILKNGIVVGDKKFEFLAFSSS 460

Query: 724  QLRDNSAWMFA-SKGSLTAASIRDWMGDFRKIRNVAKYAARLGQSFGSSTETLSVSRXXX 548
            QLR+NS WMFA ++   TAA IR WMG+F +IRNVAKYAARLGQSFGSSTETLSV R   
Sbjct: 461  QLRENSLWMFAPTETGCTAAYIRKWMGNFSQIRNVAKYAARLGQSFGSSTETLSVHRDEV 520

Query: 547  XXXXXXXXES-NGTVYTFSDGIGKISSEFAHKVASKCGLKCTPSAFQIRYGGYKGVVAVD 371
                     + +G  Y FSDGIGKIS EFA KVA KCG  CTPSAFQIRYGGYKGVVAVD
Sbjct: 521  EIIPDVKKLTYDGNEYVFSDGIGKISLEFAQKVAKKCGYDCTPSAFQIRYGGYKGVVAVD 580

Query: 370  PRSVKKLYLRPSMRKFKSKVTKLDVLSWSKFQPCFLNRQIISLLSTLGVSDYVFKKKQKE 191
            P+S  KL LR SMRK+ S  TKLDVL+ SKFQPC+LNRQ+ISLLSTLG+ D VF+KKQ+E
Sbjct: 581  PKSCYKLSLRKSMRKYDSDNTKLDVLARSKFQPCYLNRQLISLLSTLGIKDDVFEKKQRE 640

Query: 190  AVKQLDSILTDPLKAYKALEIMSPAETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLS 11
             V QL++ILTD LKA + L++MS  E TN+LKEML+CGYKP++EPFLSMMLQTFRA+KL 
Sbjct: 641  TVNQLNTILTDSLKAQEVLDLMSAGEITNVLKEMLICGYKPNEEPFLSMMLQTFRASKLL 700

Query: 10   ELR 2
            ELR
Sbjct: 701  ELR 703


>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
          Length = 775

 Score =  477 bits (1228), Expect = e-132
 Identities = 252/361 (69%), Positives = 286/361 (79%)
 Frame = -3

Query: 1084 QYLEYSLSANPPRSTSISLSDGLVYVRRVQVTPLKVYFLGPEINVSNRVLRYYREHIDNF 905
            QY EY      P+S SI+L DGL+YVRRV VTP KVYFLGPE+NVSNRVLR Y E IDNF
Sbjct: 26   QYDEYLKRRQLPKSPSITLDDGLMYVRRVLVTPCKVYFLGPEVNVSNRVLRNYSEDIDNF 85

Query: 904  IRISFVDEDSEKIRSTDLSARATMNDEKKQTLLYERILSTLHNGVVIGDKKFEFLAFSTS 725
            +R+SFVDE+ EKI S DL  RA  N  +  T +YERILSTL NG+VIG KKFEFLAFS+S
Sbjct: 86   LRVSFVDEEWEKIFSMDLLPRANRNGIR--TDIYERILSTLQNGLVIGAKKFEFLAFSSS 143

Query: 724  QLRDNSAWMFASKGSLTAASIRDWMGDFRKIRNVAKYAARLGQSFGSSTETLSVSRXXXX 545
            QLRDNS WMFAS+  LTA  IR WMGDF++IRNVAKYAARLGQSFGSS ETLSV R    
Sbjct: 144  QLRDNSVWMFASRPGLTAYDIRTWMGDFQQIRNVAKYAARLGQSFGSSRETLSVGRHEIK 203

Query: 544  XXXXXXXESNGTVYTFSDGIGKISSEFAHKVASKCGLKCTPSAFQIRYGGYKGVVAVDPR 365
                     +GT Y FSDGIGKIS++FAH+VA KCGL+ TPSAFQIRYGGYKGVVAVDP 
Sbjct: 204  YIPDVEV--HGTNYVFSDGIGKISADFAHRVAKKCGLQHTPSAFQIRYGGYKGVVAVDPY 261

Query: 364  SVKKLYLRPSMRKFKSKVTKLDVLSWSKFQPCFLNRQIISLLSTLGVSDYVFKKKQKEAV 185
            S  KL LR SM K++S  TKLDVL WSK+QPC+LNRQ+++L+STLGV D VFK+KQ EAV
Sbjct: 262  SPMKLSLRKSMLKYESNNTKLDVLGWSKYQPCYLNRQLVTLMSTLGVKDEVFKRKQNEAV 321

Query: 184  KQLDSILTDPLKAYKALEIMSPAETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLSEL 5
             QLD+IL D LKA +AL++MSP E TNILKEML CGY PD EPFLSMMLQTFRA+KL +L
Sbjct: 322  AQLDAILHDSLKAQEALDLMSPGENTNILKEMLNCGYLPDAEPFLSMMLQTFRASKLLDL 381

Query: 4    R 2
            R
Sbjct: 382  R 382


>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score =  477 bits (1227), Expect = e-132
 Identities = 251/362 (69%), Positives = 291/362 (80%), Gaps = 1/362 (0%)
 Frame = -3

Query: 1084 QYLEYSLSANPPRSTSISLSDGLVYVRRVQVTPLKVYFLGPEINVSNRVLRYYREHIDNF 905
            QY  Y +S     S +ISL  GLVYVRRVQ+TP KVYF GPE+NVSNRVLR Y E IDNF
Sbjct: 332  QYRTY-ISKQVAGSPAISLDTGLVYVRRVQITPCKVYFCGPEVNVSNRVLRNYPEDIDNF 390

Query: 904  IRISFVDEDSEKIRSTDLSARATMNDEKKQTLLYERILSTLHNGVVIGDKKFEFLAFSTS 725
            +R+SF+DE+SEKI ST +S R  M++E ++T +Y RILS L NG+VIGDKKF+FLA S+S
Sbjct: 391  LRVSFLDENSEKIHSTVISPR--MSNEGRRTGVYRRILSILQNGIVIGDKKFDFLAVSSS 448

Query: 724  QLRDNSAWMFASKGSLTAASIRDWMGDFRKIRNVAKYAARLGQSFGSSTETLSVSRXXXX 545
            QLRDNSAWMFAS+  LTAA IR  MGDF +IRNVAKYAARLGQSF SS ETL V++    
Sbjct: 449  QLRDNSAWMFASRPGLTAADIRSRMGDFSQIRNVAKYAARLGQSFSSSKETLKVAKHEIE 508

Query: 544  XXXXXXXESNGTVYTFSDGIGKISSEFAHKVASKCGLK-CTPSAFQIRYGGYKGVVAVDP 368
                     +GT Y FSDGIGKIS+E AH+VA KCG K  TPSAFQIRYGGYKGVVAVDP
Sbjct: 509  IIPDIETHRDGTTYVFSDGIGKISAELAHRVAIKCGCKNSTPSAFQIRYGGYKGVVAVDP 568

Query: 367  RSVKKLYLRPSMRKFKSKVTKLDVLSWSKFQPCFLNRQIISLLSTLGVSDYVFKKKQKEA 188
             S +KL LR SM K++S+ T LDVLSWSK++PCFLNRQ+I+LLSTLGV D+VF+KKQ+EA
Sbjct: 569  TSSRKLSLRKSMFKYESENTNLDVLSWSKYRPCFLNRQLITLLSTLGVKDHVFEKKQREA 628

Query: 187  VKQLDSILTDPLKAYKALEIMSPAETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLSE 8
            V QLD+IL DPL+A +ALE+MSP E TNILKEML+CGYKPD EPFLSMMLQTFRAAKL E
Sbjct: 629  VDQLDTILKDPLRAQEALELMSPGENTNILKEMLMCGYKPDAEPFLSMMLQTFRAAKLLE 688

Query: 7    LR 2
            LR
Sbjct: 689  LR 690


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  476 bits (1226), Expect = e-132
 Identities = 246/362 (67%), Positives = 291/362 (80%), Gaps = 1/362 (0%)
 Frame = -3

Query: 1084 QYLEYSLSANPPRSTSISLSDGLVYVRRVQVTPLKVYFLGPEINVSNRVLRYYREHIDNF 905
            +Y  +S S     S +ISL +GLVYVRRVQ+TP +VYF GPEINVSNRVLR +   IDNF
Sbjct: 341  EYKNFSRSRKYQGSPTISLDEGLVYVRRVQITPSRVYFCGPEINVSNRVLRQFHNDIDNF 400

Query: 904  IRISFVDEDSEKIRSTDLSARATMNDEKKQTLLYERILSTLHNGVVIGDKKFEFLAFSTS 725
            +RISFVDE+ EKI ST++ AR       ++T +Y+RILSTL NG+VIG+K+FEFLAFS+S
Sbjct: 401  LRISFVDEELEKIHSTNVQARG------RRTGIYKRILSTLRNGIVIGNKRFEFLAFSSS 454

Query: 724  QLRDNSAWMFASKGSLTAASIRDWMGDFRKIRNVAKYAARLGQSFGSSTETLSVSRXXXX 545
            QLR+NSAWMFAS+  LTAA IR WMG+F KIRNVAKYAARLGQSF SSTETLSVS+    
Sbjct: 455  QLRENSAWMFASRKGLTAADIRSWMGNFSKIRNVAKYAARLGQSFSSSTETLSVSKDEIN 514

Query: 544  XXXXXXXESNGTVYTFSDGIGKISSEFAHKVASKCGLK-CTPSAFQIRYGGYKGVVAVDP 368
                     +G  Y F DGIGKIS+EFA KVA+KC LK CTPSAFQIR GG+KGVVA+DP
Sbjct: 515  LIPDIEIMKDGIKYVFPDGIGKISAEFAKKVAAKCRLKGCTPSAFQIRIGGFKGVVAIDP 574

Query: 367  RSVKKLYLRPSMRKFKSKVTKLDVLSWSKFQPCFLNRQIISLLSTLGVSDYVFKKKQKEA 188
             S  KL LR SM K++S+ TKLDVL+WSK+QPCFLNRQ+I+LLSTLGV DY F+KKQ+E 
Sbjct: 575  TSSWKLSLRKSMEKYESENTKLDVLAWSKYQPCFLNRQLITLLSTLGVPDYAFEKKQREV 634

Query: 187  VKQLDSILTDPLKAYKALEIMSPAETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLSE 8
            V QL+++LTDPL+A +ALE+MSP E TNILKEMLLCGYKPD EPFLSMML+TFRA+KL E
Sbjct: 635  VDQLNALLTDPLEAQEALELMSPGENTNILKEMLLCGYKPDAEPFLSMMLETFRASKLLE 694

Query: 7    LR 2
            LR
Sbjct: 695  LR 696