BLASTX nr result

ID: Papaver23_contig00006532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00006532
         (1012 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6...   441   e-121
emb|CAA45523.1| photosystem I light-harvesting chlorophyll a/b-b...   434   e-119
ref|XP_002533251.1| chlorophyll A/B binding protein, putative [R...   433   e-119
ref|XP_002312019.1| light-harvesting complex I protein Lhca1 [Po...   433   e-119
ref|XP_002275552.1| PREDICTED: chlorophyll a-b binding protein 6...   432   e-119

>ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
           [Cucumis sativus] gi|449525097|ref|XP_004169556.1|
           PREDICTED: chlorophyll a-b binding protein 6A,
           chloroplastic-like [Cucumis sativus]
          Length = 246

 Score =  441 bits (1133), Expect = e-121
 Identities = 211/242 (87%), Positives = 222/242 (91%), Gaps = 1/242 (0%)
 Frame = +1

Query: 151 MAANTLRSCGVAAV-FPSVLSSSKSKFATSVAFPGAYSNGSSRFTMSAEWMPGEPRPSYL 327
           MA+NTL SCG+A   FPSVLSSSKSKFA  V   G   N SSRF+MSAEWMPG+PRP YL
Sbjct: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60

Query: 328 DGSAPGDFGFDPLGLGAVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 507
           DGSAPGDFGFDPLGLG VPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW
Sbjct: 61  DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 508 AALPDGQATYLGNVVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 687
           AA+P GQATYLG  VPWGTLPTILVIEFL+IAFVEHQRSMEKDPEKKKYPGGAFDPLGYS
Sbjct: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 688 KDPKKFQEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLAAHLADPWHSNIGDVLI 867
           KDP+K +EYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLA HLADPWH+NIGD++I
Sbjct: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240

Query: 868 PR 873
           PR
Sbjct: 241 PR 242


>emb|CAA45523.1| photosystem I light-harvesting chlorophyll a/b-binding protein
           [Nicotiana tabacum]
          Length = 245

 Score =  434 bits (1116), Expect = e-119
 Identities = 208/243 (85%), Positives = 222/243 (91%)
 Frame = +1

Query: 151 MAANTLRSCGVAAVFPSVLSSSKSKFATSVAFPGAYSNGSSRFTMSAEWMPGEPRPSYLD 330
           MA+NTL SCG+AAV PSVLSSS SKFA +V       +G+SRF+MSAEWMPG+PRP YLD
Sbjct: 1   MASNTLMSCGIAAVSPSVLSSSYSKFAVAVPVCVGAVSGNSRFSMSAEWMPGQPRPPYLD 60

Query: 331 GSAPGDFGFDPLGLGAVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWA 510
           GSAPGDFGFDPLGLG VP NLER+KESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWA
Sbjct: 61  GSAPGDFGFDPLGLGEVPSNLERYKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWA 120

Query: 511 ALPDGQATYLGNVVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSK 690
           A+P GQATYLG  VPWGTLPTIL IEFL+IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSK
Sbjct: 121 AIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSK 180

Query: 691 DPKKFQEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLAAHLADPWHSNIGDVLIP 870
           DPKKF+E KVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLA HLADPWH+NIGDV+I 
Sbjct: 181 DPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDVIIL 240

Query: 871 RGL 879
           RG+
Sbjct: 241 RGI 243


>ref|XP_002533251.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223526931|gb|EEF29136.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 244

 Score =  433 bits (1114), Expect = e-119
 Identities = 207/240 (86%), Positives = 218/240 (90%)
 Frame = +1

Query: 151 MAANTLRSCGVAAVFPSVLSSSKSKFATSVAFPGAYSNGSSRFTMSAEWMPGEPRPSYLD 330
           MA NTL SCG+A  FPS+LSSSKSKFA+SV  P   +  SSR TMSA+WMPG+PRP YLD
Sbjct: 1   MATNTLMSCGIATAFPSLLSSSKSKFASSVPLP-CVNGSSSRITMSADWMPGQPRPPYLD 59

Query: 331 GSAPGDFGFDPLGLGAVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWA 510
           GSAPGDFGFDPL LG VPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWA
Sbjct: 60  GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWA 119

Query: 511 ALPDGQATYLGNVVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSK 690
           A+P GQATYLG  VPWGTLPTILVIEFL+IAFVEHQRSMEKDPEKKKYPGGAFDPLGYSK
Sbjct: 120 AIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSK 179

Query: 691 DPKKFQEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLAAHLADPWHSNIGDVLIP 870
           DP KF EYKVKEIKNGRLALLAFVG CVQQSAYPGTGPLENLA HLADPWH+NIGD++IP
Sbjct: 180 DPAKFHEYKVKEIKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP 239


>ref|XP_002312019.1| light-harvesting complex I protein Lhca1 [Populus trichocarpa]
           gi|222851839|gb|EEE89386.1| light-harvesting complex I
           protein Lhca1 [Populus trichocarpa]
          Length = 244

 Score =  433 bits (1113), Expect = e-119
 Identities = 202/242 (83%), Positives = 221/242 (91%)
 Frame = +1

Query: 154 AANTLRSCGVAAVFPSVLSSSKSKFATSVAFPGAYSNGSSRFTMSAEWMPGEPRPSYLDG 333
           A NTL SCG+A  FPS+LSSSKSKFA+S+  P    NG+SR TMSA+W+PG+PRP YLDG
Sbjct: 3   ATNTLMSCGIATAFPSLLSSSKSKFASSIPLPSV--NGTSRVTMSADWLPGQPRPPYLDG 60

Query: 334 SAPGDFGFDPLGLGAVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAA 513
           SAPGDFGFDPL LG VPENLER+KESELIHCRWAMLAVPGIL+PEALGLGNWVKAQEWAA
Sbjct: 61  SAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILIPEALGLGNWVKAQEWAA 120

Query: 514 LPDGQATYLGNVVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKD 693
            P GQATYLG  VPWGTLPT+L IEF++IAFVEHQRSMEKDPEKKKYPGGAFDPLG+SKD
Sbjct: 121 APGGQATYLGQPVPWGTLPTVLAIEFVAIAFVEHQRSMEKDPEKKKYPGGAFDPLGFSKD 180

Query: 694 PKKFQEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLAAHLADPWHSNIGDVLIPR 873
           PKKF+EYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLA HLADPWH+NIGD+++PR
Sbjct: 181 PKKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIVPR 240

Query: 874 GL 879
            L
Sbjct: 241 TL 242


>ref|XP_002275552.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic
           isoform 1 [Vitis vinifera] gi|147800947|emb|CAN75566.1|
           hypothetical protein VITISV_032585 [Vitis vinifera]
          Length = 244

 Score =  432 bits (1112), Expect = e-119
 Identities = 206/243 (84%), Positives = 224/243 (92%)
 Frame = +1

Query: 151 MAANTLRSCGVAAVFPSVLSSSKSKFATSVAFPGAYSNGSSRFTMSAEWMPGEPRPSYLD 330
           MA+  LRSCGVAAV PS+LSSSKSKFATS+  P A + GS+R TMSA+WMPG+PRP YLD
Sbjct: 1   MASTVLRSCGVAAVAPSLLSSSKSKFATSLPLPNAAA-GSARVTMSADWMPGQPRPPYLD 59

Query: 331 GSAPGDFGFDPLGLGAVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWA 510
           GSAPGDFGFDPL LG VPENLER+KESELIHCRWAMLAVPG+LVPEALGLGNWV+AQEWA
Sbjct: 60  GSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGVLVPEALGLGNWVQAQEWA 119

Query: 511 ALPDGQATYLGNVVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSK 690
           A+P GQATYLGN VPWG LPTIL IEFL+IAFVEHQRSMEKD EKKKYPGGAFDPLGYSK
Sbjct: 120 AIPGGQATYLGNPVPWGNLPTILAIEFLAIAFVEHQRSMEKDTEKKKYPGGAFDPLGYSK 179

Query: 691 DPKKFQEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLAAHLADPWHSNIGDVLIP 870
           DP KF+EYKVKEIKNGRLA+LAFVGFCVQQSAYPGTGPLENLA+HLADPWH+NIGDV+IP
Sbjct: 180 DPVKFEEYKVKEIKNGRLAILAFVGFCVQQSAYPGTGPLENLASHLADPWHNNIGDVIIP 239

Query: 871 RGL 879
           R +
Sbjct: 240 RSI 242


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