BLASTX nr result

ID: Papaver23_contig00006529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00006529
         (1112 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280225.2| PREDICTED: epithelial splicing regulatory pr...   351   2e-94
ref|XP_002521718.1| heterogeneous nuclear ribonucleoprotein, put...   351   2e-94
emb|CAN70556.1| hypothetical protein VITISV_016468 [Vitis vinifera]   338   1e-90
ref|XP_003534236.1| PREDICTED: heterogeneous nuclear ribonucleop...   333   3e-89
ref|XP_003629130.1| Heterogeneous nuclear ribonucleoprotein F [M...   333   6e-89

>ref|XP_002280225.2| PREDICTED: epithelial splicing regulatory protein 2-like [Vitis
            vinifera]
          Length = 264

 Score =  351 bits (901), Expect = 2e-94
 Identities = 173/255 (67%), Positives = 203/255 (79%), Gaps = 1/255 (0%)
 Frame = -2

Query: 1108 MYGSRGAMLXXXXXXXXXXXXSKRQRMIESNPYFPVNAGASSYQPFSSYGGGWNL-TFPV 932
            MYGSRGAML            SKRQRM+ESNPYF V++ AS +QP+  YG G+   TFPV
Sbjct: 1    MYGSRGAMLGSGGVSDGYEIGSKRQRMMESNPYFAVSSSASGFQPYG-YGSGFQPPTFPV 59

Query: 931  VRLRGLPFNCTDIDIYKFFGGLDIIDCLLVNKNGRFSGEAFVVFSNTMQSEVALQKDHQN 752
            VRLRGLPFNCTDIDI+KFF GLDI+D LLVNK+GRFSGEA+VVF+ +MQ++ ALQ+D QN
Sbjct: 60   VRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKSGRFSGEAYVVFAGSMQADFALQRDRQN 119

Query: 751  MGRRYVEVFRCNKQDYYHAISAEMNYEGSYDEYXXXXXXXXXXXXSVDKDQLEYTEILKL 572
            MGRRYVEVFRC KQDYYHA+++E+NYEG YD                DKDQ+E+TEILKL
Sbjct: 120  MGRRYVEVFRCKKQDYYHAVASEVNYEGIYDNDFHGSPPPSRSKRFSDKDQMEHTEILKL 179

Query: 571  RGLPFSATKSEILDFFGDFDLVEDSIHLACRADGKPTGEAYVEFVSTDEAKRAMGKDKMT 392
            RGLPFS  KS+IL+FFGDF+L +D +H+ACR DGK TGEAYVEF S +EAK+AMGKDKMT
Sbjct: 180  RGLPFSVKKSQILEFFGDFELGDDKVHIACRPDGKATGEAYVEFASAEEAKKAMGKDKMT 239

Query: 391  MGSRYVELFPSTPDE 347
            +GSRYVELFPSTPDE
Sbjct: 240  IGSRYVELFPSTPDE 254


>ref|XP_002521718.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus communis]
            gi|223539109|gb|EEF40705.1| heterogeneous nuclear
            ribonucleoprotein, putative [Ricinus communis]
          Length = 264

 Score =  351 bits (900), Expect = 2e-94
 Identities = 174/254 (68%), Positives = 197/254 (77%)
 Frame = -2

Query: 1108 MYGSRGAMLXXXXXXXXXXXXSKRQRMIESNPYFPVNAGASSYQPFSSYGGGWNLTFPVV 929
            MYGSRGAML            SKR RM+ESNPYF V+ G+S +QP+   GG  +  FPVV
Sbjct: 1    MYGSRGAMLGSGGVSDGYEVGSKRPRMMESNPYFAVSGGSSGFQPYGYGGGFQSAPFPVV 60

Query: 928  RLRGLPFNCTDIDIYKFFGGLDIIDCLLVNKNGRFSGEAFVVFSNTMQSEVALQKDHQNM 749
            RLRGLPFNCTDIDI+KFF GLDI+D LLVNKNGRF+GEAFVVF+  MQ E ALQ+D QNM
Sbjct: 61   RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFTGEAFVVFAGAMQVEFALQRDRQNM 120

Query: 748  GRRYVEVFRCNKQDYYHAISAEMNYEGSYDEYXXXXXXXXXXXXSVDKDQLEYTEILKLR 569
            GRRYVEVFRC +QDYY+A++AE+NYEG YD                DKDQLEYTEILK+R
Sbjct: 121  GRRYVEVFRCKRQDYYNAVAAEVNYEGIYDTDYHGSPPPSKAKRFSDKDQLEYTEILKMR 180

Query: 568  GLPFSATKSEILDFFGDFDLVEDSIHLACRADGKPTGEAYVEFVSTDEAKRAMGKDKMTM 389
            GLPFSA K EI++FF +F+LVED IH+ACR DGK TGEAYVEF S DEAKRAM KDKMT+
Sbjct: 181  GLPFSAKKPEIIEFFKEFELVEDRIHIACRPDGKATGEAYVEFASADEAKRAMSKDKMTI 240

Query: 388  GSRYVELFPSTPDE 347
            GSRYVELFPSTPDE
Sbjct: 241  GSRYVELFPSTPDE 254


>emb|CAN70556.1| hypothetical protein VITISV_016468 [Vitis vinifera]
          Length = 257

 Score =  338 bits (868), Expect = 1e-90
 Identities = 163/233 (69%), Positives = 193/233 (82%), Gaps = 1/233 (0%)
 Frame = -2

Query: 1042 KRQRMIESNPYFPVNAGASSYQPFSSYGGGWNL-TFPVVRLRGLPFNCTDIDIYKFFGGL 866
            KRQRM+ESNPYF V++ AS +QP+  YG G+   TFPVVRLRGLPFNCTDIDI+KFF GL
Sbjct: 16   KRQRMMESNPYFAVSSSASGFQPYG-YGSGFQPPTFPVVRLRGLPFNCTDIDIFKFFAGL 74

Query: 865  DIIDCLLVNKNGRFSGEAFVVFSNTMQSEVALQKDHQNMGRRYVEVFRCNKQDYYHAISA 686
            DI+D LLVNK+GRFSGEA+VVF+ +MQ++ ALQ+D QNMGRRYVEVFRC KQDYYHA+++
Sbjct: 75   DIVDVLLVNKSGRFSGEAYVVFAGSMQADFALQRDRQNMGRRYVEVFRCKKQDYYHAVAS 134

Query: 685  EMNYEGSYDEYXXXXXXXXXXXXSVDKDQLEYTEILKLRGLPFSATKSEILDFFGDFDLV 506
            E+NYEG YD                DKDQ+E+TEILKLRGLPFS  KS+IL+FFGDF+L 
Sbjct: 135  EVNYEGIYDNDFHGSPPPSRSKRFSDKDQMEHTEILKLRGLPFSVKKSQILEFFGDFELG 194

Query: 505  EDSIHLACRADGKPTGEAYVEFVSTDEAKRAMGKDKMTMGSRYVELFPSTPDE 347
            +D +H+ACR DGK TGEAYVEF S +EAK+AMGKDKMT+GSRYVELFPSTPDE
Sbjct: 195  DDKVHIACRPDGKATGEAYVEFASAEEAKKAMGKDKMTIGSRYVELFPSTPDE 247


>ref|XP_003534236.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform 1
            [Glycine max]
          Length = 264

 Score =  333 bits (855), Expect = 3e-89
 Identities = 169/255 (66%), Positives = 193/255 (75%), Gaps = 1/255 (0%)
 Frame = -2

Query: 1108 MYGSRGAMLXXXXXXXXXXXXSKRQRMIESNPYFPVNAGASSYQPFSSYGGGWNLTFPVV 929
            MYG RGAML            SKRQRM+ESNPYF V++G  +  P+   GG     FPVV
Sbjct: 1    MYGPRGAMLGSGGVSDGYEVGSKRQRMMESNPYFAVSSGTGNL-PYGYAGGFQPPPFPVV 59

Query: 928  RLRGLPFNCTDIDIYKFFGGLDIIDCLLVNKNGRFSGEAFVVFSNTMQSEVALQKDHQNM 749
            RLRGLPFNCTDIDI KFF GL I+D LLVNK+GRFSGEAFVVF+  MQ E ALQ+D QNM
Sbjct: 60   RLRGLPFNCTDIDILKFFAGLTIVDVLLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQNM 119

Query: 748  GRRYVEVFRCNKQDYYHAISAEMNYEGSYD-EYXXXXXXXXXXXXSVDKDQLEYTEILKL 572
            GRRYVEVFRC KQDYY+A++ E+NYEG YD +Y              DKDQ+EYTEILK+
Sbjct: 120  GRRYVEVFRCKKQDYYNAVAGEINYEGIYDNDYHGSSPPPSRLKRFNDKDQMEYTEILKM 179

Query: 571  RGLPFSATKSEILDFFGDFDLVEDSIHLACRADGKPTGEAYVEFVSTDEAKRAMGKDKMT 392
            RGLPF  TKS+I++FF DF L+ED +H+ACR DGK TGEAYVEFVS +EAKRAM KDKMT
Sbjct: 180  RGLPFQVTKSQIVEFFKDFKLIEDRVHIACRPDGKATGEAYVEFVSAEEAKRAMSKDKMT 239

Query: 391  MGSRYVELFPSTPDE 347
            +GSRYVELFPSTPDE
Sbjct: 240  IGSRYVELFPSTPDE 254


>ref|XP_003629130.1| Heterogeneous nuclear ribonucleoprotein F [Medicago truncatula]
            gi|355523152|gb|AET03606.1| Heterogeneous nuclear
            ribonucleoprotein F [Medicago truncatula]
          Length = 290

 Score =  333 bits (853), Expect = 6e-89
 Identities = 169/258 (65%), Positives = 195/258 (75%), Gaps = 3/258 (1%)
 Frame = -2

Query: 1111 TMYGS-RGAMLXXXXXXXXXXXXSKRQRMIESNPYFPVNAGASSYQPFSSYGGGWNLT-- 941
            T+YG+ RGAML            SKRQRM+ESNPYF V++G  SYQ +   GGG+     
Sbjct: 23   TIYGAPRGAMLGSGGVSDGYEVGSKRQRMMESNPYFAVSSGTGSYQHYGYAGGGFQPPPP 82

Query: 940  FPVVRLRGLPFNCTDIDIYKFFGGLDIIDCLLVNKNGRFSGEAFVVFSNTMQSEVALQKD 761
            FPVVRLRGLPFNCTDIDI KFF GL I+D LLVNK+GRFSGEAFVVF+  MQ E ALQ+D
Sbjct: 83   FPVVRLRGLPFNCTDIDILKFFAGLTIVDVLLVNKSGRFSGEAFVVFAGAMQVEFALQRD 142

Query: 760  HQNMGRRYVEVFRCNKQDYYHAISAEMNYEGSYDEYXXXXXXXXXXXXSVDKDQLEYTEI 581
             QNMGRRYVEVFRC KQDYY+A++ E+NYEG YD                DK+Q++YTEI
Sbjct: 143  RQNMGRRYVEVFRCKKQDYYNAVAGEINYEGIYDNDYQGSPPPSRSKRFSDKEQMDYTEI 202

Query: 580  LKLRGLPFSATKSEILDFFGDFDLVEDSIHLACRADGKPTGEAYVEFVSTDEAKRAMGKD 401
            LK+RGLPF  TKS+I+DFF D+ L+E  +H+ACR DGK TGEAYVEFVS DEAKRAM KD
Sbjct: 203  LKMRGLPFLVTKSQIIDFFKDYKLIEGRVHIACRPDGKATGEAYVEFVSPDEAKRAMFKD 262

Query: 400  KMTMGSRYVELFPSTPDE 347
            KMT+GSRYVELFPSTPDE
Sbjct: 263  KMTIGSRYVELFPSTPDE 280


Top